Wall clock time and date at job start Sun Mar 7 2021 07:01:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 O 1.45198 * 109.47092 * 2 1 4 4 C 1.34226 * 116.99972 * 179.97438 * 3 2 1 5 5 O 1.20829 * 120.00243 * 0.02562 * 4 3 2 6 6 C 1.50701 * 120.00120 * 180.02562 * 4 3 2 7 7 H 1.09002 * 112.85047 * 50.33376 * 6 4 3 8 8 C 1.53781 * 113.61772 * 181.53091 * 6 4 3 9 9 C 1.53777 * 87.08336 * 140.06093 * 8 6 4 10 10 O 1.42898 * 113.61048 * 89.11543 * 9 8 6 11 11 C 1.52998 * 113.61649 * 219.93585 * 9 8 6 12 12 N 1.46495 * 109.47363 * 180.02562 * 11 9 8 13 13 C 1.34777 * 120.00422 * 179.97438 * 12 11 9 14 14 O 1.21689 * 119.99629 * 359.97438 * 13 12 11 15 15 C 1.46677 * 120.00242 * 179.97438 * 13 12 11 16 16 C 1.37870 * 126.23190 * 180.02562 * 15 13 12 17 17 C 1.39838 * 107.08168 * 180.02562 * 16 15 13 18 18 C 1.50708 * 126.06419 * 180.02562 * 17 16 15 19 19 O 1.42897 * 109.47254 * 300.00071 * 18 17 16 20 20 Si 1.86300 * 109.46771 * 179.97438 * 18 17 16 21 21 C 1.35447 * 107.86956 * 359.97438 * 17 16 15 22 22 N 1.35534 * 108.86754 * 359.73103 * 21 17 16 23 23 C 1.53775 * 87.07992 * 334.56762 * 9 8 6 24 24 H 1.09002 * 109.47144 * 180.02562 * 1 2 3 25 25 H 1.08998 * 109.46948 * 299.99504 * 1 2 3 26 26 H 1.08998 * 109.47257 * 59.99725 * 1 2 3 27 27 H 1.08997 * 109.46999 * 239.99949 * 2 1 3 28 28 H 1.09000 * 109.47000 * 119.99798 * 2 1 3 29 29 H 1.08997 * 113.61673 * 254.61641 * 8 6 4 30 30 H 1.09009 * 113.61202 * 25.42872 * 8 6 4 31 31 H 0.96702 * 114.00290 * 179.97438 * 10 9 8 32 32 H 1.09004 * 109.46784 * 300.00166 * 11 9 8 33 33 H 1.09000 * 109.47349 * 60.00231 * 11 9 8 34 34 H 0.97001 * 120.00011 * 359.97438 * 12 11 9 35 35 H 1.08001 * 126.45798 * 0.02918 * 16 15 13 36 36 H 1.08995 * 109.46824 * 60.00341 * 18 17 16 37 37 H 0.96701 * 113.99953 * 300.00198 * 19 18 17 38 38 H 1.48499 * 109.99660 * 179.97438 * 20 18 17 39 39 H 1.48499 * 110.00127 * 301.32048 * 20 18 17 40 40 H 1.08002 * 125.56649 * 180.02562 * 21 17 16 41 41 H 0.97005 * 125.67810 * 180.30478 * 22 21 17 42 42 H 1.08993 * 113.61636 * 270.87622 * 23 9 8 43 43 H 1.09008 * 113.61006 * 139.97865 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0808 0.5866 0.0005 6 6 3.9208 2.9374 0.0012 7 1 3.4898 3.5734 0.7744 8 6 5.4578 2.9683 -0.0359 9 6 5.3322 4.1543 -1.0067 10 8 5.2731 5.4242 -0.3541 11 6 6.3482 4.1206 -2.1502 12 7 6.1488 5.2861 -3.0151 13 6 6.9356 5.4669 -4.0943 14 8 7.8119 4.6623 -4.3500 15 6 6.7355 6.6336 -4.9606 16 6 7.4613 6.9430 -6.0912 17 6 6.9363 8.1337 -6.6032 18 6 7.4143 8.8562 -7.8364 19 8 8.7862 9.2212 -7.6729 20 14 6.3892 10.3903 -8.0938 21 6 5.9212 8.5219 -5.7948 22 7 5.7849 7.6154 -4.7964 23 6 3.9525 3.5935 -1.3893 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5138 0.8900 26 1 -0.3634 0.5139 -0.8899 27 1 1.8934 -0.5138 -0.8900 28 1 1.8934 -0.5138 0.8900 29 1 5.9124 3.2319 0.9190 30 1 5.9017 2.0798 -0.4851 31 1 5.1945 6.1743 -0.9595 32 1 7.3578 4.1416 -1.7399 33 1 6.2110 3.2088 -2.7314 34 1 5.4504 5.9277 -2.8111 35 1 8.2808 6.3732 -6.5037 36 1 7.3130 8.2024 -8.7026 37 1 8.9510 9.8038 -6.9190 38 1 6.8511 11.1122 -9.3066 39 1 4.9564 10.0263 -8.2336 40 1 5.3159 9.4065 -5.9271 41 1 5.1283 7.6536 -4.0834 42 1 3.9847 2.8767 -2.2098 43 1 3.1917 4.3620 -1.5269 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_10543058.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:01:30 Heat of formation + Delta-G solvation = -122.919132 kcal Electronic energy + Delta-G solvation = -27116.289124 eV Core-core repulsion = 22937.294032 eV Total energy + Delta-G solvation = -4178.995091 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 325.145 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.59957 -42.12441 -40.82282 -39.82845 -37.69285 -37.65732 -36.17225 -35.53131 -32.78214 -32.66297 -31.12986 -29.61953 -27.22805 -26.83938 -26.07751 -24.17067 -23.54139 -22.00229 -21.37114 -20.96183 -20.88251 -20.34461 -18.84186 -18.14620 -17.75315 -17.47486 -17.35902 -17.28199 -16.78422 -16.56904 -16.30997 -16.02303 -15.61175 -15.35878 -15.06471 -14.92296 -14.78102 -14.41373 -14.37050 -14.19009 -13.98197 -13.92689 -13.69438 -13.52054 -13.34647 -13.02650 -12.87215 -12.67163 -12.43483 -12.25909 -11.98474 -11.87143 -11.56271 -11.51247 -11.26795 -11.08709 -10.43239 -10.42188 -9.99226 -9.38171 -5.07420 0.31937 1.11750 1.30102 1.44876 1.56652 1.61463 1.77099 1.89160 1.98873 2.27873 2.57109 2.93700 3.18011 3.25677 3.30377 3.56630 3.64883 3.79387 3.82992 3.90371 3.95607 3.96337 4.01061 4.19509 4.24738 4.30218 4.38717 4.40985 4.55394 4.61798 4.65522 4.67872 4.74741 4.76011 4.83620 4.92779 4.96578 4.97112 5.04227 5.42345 5.50265 5.71884 6.05778 6.16803 6.24546 6.69028 6.70522 6.97729 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.470 3.530 5 O -0.504 6.504 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.100 4.100 9 C 0.096 3.904 10 O -0.528 6.528 11 C 0.105 3.895 12 N -0.735 5.735 13 C 0.593 3.407 14 O -0.517 6.517 15 C -0.061 4.061 16 C -0.072 4.072 17 C -0.211 4.211 18 C -0.034 4.034 19 O -0.542 6.542 20 Si 0.687 3.313 21 C 0.037 3.963 22 N -0.536 5.536 23 C -0.145 4.145 24 H 0.082 0.918 25 H 0.067 0.933 26 H 0.067 0.933 27 H 0.071 0.929 28 H 0.071 0.929 29 H 0.095 0.905 30 H 0.115 0.885 31 H 0.375 0.625 32 H 0.086 0.914 33 H 0.087 0.913 34 H 0.390 0.610 35 H 0.151 0.849 36 H 0.111 0.889 37 H 0.378 0.622 38 H -0.256 1.256 39 H -0.258 1.258 40 H 0.176 0.824 41 H 0.417 0.583 42 H 0.099 0.901 43 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.117 5.163 2.776 8.472 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.391 6.391 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.138 4.138 9 C 0.055 3.945 10 O -0.334 6.334 11 C -0.018 4.018 12 N -0.389 5.389 13 C 0.381 3.619 14 O -0.392 6.392 15 C -0.173 4.173 16 C -0.098 4.098 17 C -0.218 4.218 18 C -0.145 4.145 19 O -0.347 6.347 20 Si 0.589 3.411 21 C -0.100 4.100 22 N -0.132 5.132 23 C -0.183 4.183 24 H 0.100 0.900 25 H 0.087 0.913 26 H 0.086 0.914 27 H 0.089 0.911 28 H 0.090 0.910 29 H 0.114 0.886 30 H 0.134 0.866 31 H 0.223 0.777 32 H 0.104 0.896 33 H 0.105 0.895 34 H 0.223 0.777 35 H 0.169 0.831 36 H 0.129 0.871 37 H 0.225 0.775 38 H -0.180 1.180 39 H -0.183 1.183 40 H 0.193 0.807 41 H 0.254 0.746 42 H 0.117 0.883 43 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -5.804 3.865 2.210 7.315 hybrid contribution -0.800 -0.135 -0.091 0.816 sum -6.604 3.730 2.119 7.875 Atomic orbital electron populations 1.21823 0.92300 1.03305 1.03636 1.23101 0.95636 0.79814 1.02805 1.86513 1.24341 1.32801 1.83669 1.23504 0.80728 0.92275 0.72219 1.90695 1.60504 1.42892 1.45003 1.22409 0.97287 0.91027 1.01377 0.84985 1.23058 0.93320 0.96411 1.00975 1.22401 0.93809 0.85634 0.92678 1.86628 1.96200 1.14352 1.36180 1.21975 1.00277 0.89198 0.90398 1.45753 1.37197 1.27673 1.28235 1.17008 0.81307 0.84063 0.79536 1.90906 1.32533 1.44147 1.71613 1.20340 0.99193 0.94899 1.02852 1.21240 0.99403 0.95874 0.93312 1.19922 1.01215 0.99570 1.01050 1.24377 0.88717 1.05327 0.96112 1.86505 1.23979 1.70768 1.53421 0.95144 0.77826 0.80799 0.87295 1.21888 1.01315 0.96162 0.90620 1.41898 1.27786 1.19677 1.23869 1.23679 0.98133 1.00920 0.95578 0.89960 0.91345 0.91403 0.91087 0.91019 0.88631 0.86630 0.77709 0.89560 0.89489 0.77660 0.83122 0.87127 0.77529 1.18039 1.18252 0.80661 0.74557 0.88282 0.89159 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.28 10.29 37.16 0.38 0.66 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.48 10.22 -39.25 -0.40 -0.88 16 4 C 0.47 0.74 7.49 36.01 0.27 1.01 16 5 O -0.50 -2.22 15.66 -18.75 -0.29 -2.51 16 6 C -0.10 0.13 4.19 -90.96 -0.38 -0.25 16 7 H 0.13 -0.28 8.14 -51.93 -0.42 -0.71 16 8 C -0.10 0.13 6.78 -25.92 -0.18 -0.04 16 9 C 0.10 -0.27 1.49 -89.81 -0.13 -0.40 16 10 O -0.53 1.53 13.41 -35.23 -0.47 1.06 16 11 C 0.11 -0.18 5.33 -4.05 -0.02 -0.20 16 12 N -0.73 1.88 5.33 -61.62 -0.33 1.55 16 13 C 0.59 0.77 7.79 -12.85 -0.10 0.67 16 14 O -0.52 -3.00 16.88 5.20 0.09 -2.91 16 15 C -0.06 0.00 7.06 -81.98 -0.58 -0.58 16 16 C -0.07 -0.11 10.59 -39.12 -0.41 -0.53 16 17 C -0.21 0.11 5.44 -105.02 -0.57 -0.46 16 18 C -0.03 0.02 3.02 36.01 0.11 0.13 16 19 O -0.54 -0.27 12.88 -35.23 -0.45 -0.73 16 20 Si 0.69 -1.51 30.59 -169.99 -5.20 -6.71 16 21 C 0.04 -0.11 10.45 -16.91 -0.18 -0.29 16 22 N -0.54 1.96 5.99 -9.39 -0.06 1.90 16 23 C -0.15 0.44 7.02 -25.92 -0.18 0.25 16 24 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 25 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 26 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 27 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 28 H 0.07 0.02 8.13 -51.93 -0.42 -0.41 16 29 H 0.10 -0.12 8.14 -51.93 -0.42 -0.54 16 30 H 0.12 -0.08 7.41 -51.92 -0.39 -0.46 16 31 H 0.37 -2.44 7.30 45.56 0.33 -2.11 16 32 H 0.09 -0.03 8.14 -51.93 -0.42 -0.45 16 33 H 0.09 -0.07 7.95 -51.93 -0.41 -0.49 16 34 H 0.39 -2.38 6.16 -40.82 -0.25 -2.63 16 35 H 0.15 0.42 8.06 -52.49 -0.42 0.00 16 36 H 0.11 0.05 7.96 -51.93 -0.41 -0.37 16 37 H 0.38 -1.32 8.70 45.56 0.40 -0.92 16 38 H -0.26 -0.42 7.11 56.52 0.40 -0.02 16 39 H -0.26 0.08 7.11 56.52 0.40 0.48 16 40 H 0.18 -1.05 6.19 -52.49 -0.32 -1.38 16 41 H 0.42 -3.06 8.19 -40.82 -0.33 -3.40 16 42 H 0.10 -0.25 7.92 -51.93 -0.41 -0.66 16 43 H 0.09 -0.39 8.14 -51.92 -0.42 -0.81 16 LS Contribution 367.39 15.07 5.54 5.54 Total: 0.00 -11.99 367.39 -8.55 -20.55 By element: Atomic # 1 Polarization: -11.82 SS G_CDS: -5.23 Total: -17.05 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -1.74 Total: 0.20 kcal Atomic # 7 Polarization: 3.84 SS G_CDS: -0.38 Total: 3.45 kcal Atomic # 8 Polarization: -4.44 SS G_CDS: -1.53 Total: -5.97 kcal Atomic # 14 Polarization: -1.51 SS G_CDS: -5.20 Total: -6.71 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -11.99 -8.55 -20.55 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_10543058.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.372 kcal (2) G-P(sol) polarization free energy of solvation -11.994 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.366 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.553 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.547 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.919 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds