Wall clock time and date at job start Sun Mar 7 2021 07:01:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.45199 * 109.46947 * 2 1 4 4 C 1.34232 * 116.99383 * 179.97438 * 3 2 1 5 5 O 1.20821 * 120.00561 * 0.02562 * 4 3 2 6 6 C 1.50700 * 119.99505 * 180.02562 * 4 3 2 7 7 H 1.08997 * 112.85256 * 48.80376 * 6 4 3 8 8 C 1.53782 * 113.61339 * 180.02562 * 6 4 3 9 9 C 1.53783 * 87.08086 * 140.06651 * 8 6 4 10 10 O 1.42894 * 113.61608 * 89.20057 * 9 8 6 11 11 C 1.53005 * 113.61057 * 220.01857 * 9 8 6 12 12 N 1.46501 * 109.46954 * 180.02562 * 11 9 8 13 13 C 1.34773 * 119.99976 * 179.97438 * 12 11 9 14 14 O 1.21693 * 119.99855 * 5.12287 * 13 12 11 15 15 C 1.46680 * 119.99781 * 185.11979 * 13 12 11 16 16 C 1.37873 * 126.23632 * 354.28674 * 15 13 12 17 17 C 1.39830 * 107.08767 * 179.97438 * 16 15 13 18 18 C 1.50699 * 126.07164 * 180.02562 * 17 16 15 19 19 O 1.42897 * 109.47027 * 245.02241 * 18 17 16 20 20 Si 1.86301 * 109.46578 * 5.01904 * 18 17 16 21 21 C 1.35459 * 107.86488 * 0.25965 * 17 16 15 22 22 N 1.35540 * 108.86952 * 359.57434 * 21 17 16 23 23 C 1.46498 * 125.67548 * 180.16865 * 22 21 17 24 24 C 1.53776 * 87.08153 * 334.56695 * 9 8 6 25 25 H 1.09001 * 109.47307 * 299.99954 * 1 2 3 26 26 H 1.08997 * 109.46948 * 60.00200 * 1 2 3 27 27 H 1.08997 * 109.47312 * 179.97438 * 1 2 3 28 28 H 1.08996 * 109.47167 * 239.99626 * 2 1 3 29 29 H 1.09006 * 109.46639 * 120.00320 * 2 1 3 30 30 H 1.09003 * 113.61531 * 25.51351 * 8 6 4 31 31 H 1.09008 * 113.68889 * 254.62628 * 8 6 4 32 32 H 0.96700 * 114.00164 * 181.52985 * 10 9 8 33 33 H 1.08998 * 109.47241 * 59.99929 * 11 9 8 34 34 H 1.09000 * 109.46979 * 299.99642 * 11 9 8 35 35 H 0.97000 * 119.99895 * 359.97438 * 12 11 9 36 36 H 1.07994 * 126.45331 * 359.94437 * 16 15 13 37 37 H 1.08998 * 109.47338 * 125.02159 * 18 17 16 38 38 H 0.96708 * 114.00205 * 59.99546 * 19 18 17 39 39 H 1.48494 * 109.99965 * 58.68776 * 20 18 17 40 40 H 1.48505 * 109.99650 * 180.02562 * 20 18 17 41 41 H 1.08003 * 125.56468 * 179.73560 * 21 17 16 42 42 H 1.09000 * 109.47476 * 274.22060 * 23 22 21 43 43 H 1.09000 * 109.47245 * 34.22195 * 23 22 21 44 44 H 1.09001 * 109.46787 * 154.22287 * 23 22 21 45 45 H 1.08997 * 113.61729 * 139.98581 * 24 9 8 46 46 H 1.09005 * 113.61382 * 270.88673 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5447 0.0005 5 8 4.0808 0.5866 0.0005 6 6 3.9207 2.9373 0.0012 7 1 3.4709 3.5811 0.7570 8 6 5.4583 2.9680 0.0011 9 6 5.3564 4.1443 -0.9842 10 8 5.2836 5.4208 -0.3462 11 6 6.3986 4.0981 -2.1035 12 7 6.2205 5.2550 -2.9845 13 6 7.0323 5.4242 -4.0469 14 8 7.8517 4.5698 -4.3288 15 6 6.9280 6.6383 -4.8635 16 6 5.9806 7.6310 -4.7305 17 6 6.2540 8.5933 -5.7075 18 6 5.4789 9.8642 -5.9426 19 8 4.8566 9.8117 -7.2278 20 14 4.1725 10.0469 -4.6270 21 6 7.3360 8.1780 -6.4086 22 7 7.7587 6.9941 -5.9019 23 6 8.9050 6.2192 -6.3832 24 6 3.9862 3.5796 -1.3946 25 1 -0.3634 0.5138 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3634 -1.0276 -0.0005 28 1 1.8933 -0.5139 -0.8899 29 1 1.8933 -0.5139 0.8900 30 1 5.9128 2.0757 -0.4295 31 1 5.8909 3.2409 0.9637 32 1 5.1959 6.1629 -0.9599 33 1 6.2739 3.1805 -2.6784 34 1 7.3984 4.1224 -1.6702 35 1 5.5183 5.8992 -2.8032 36 1 5.1783 7.6598 -4.0082 37 1 6.1573 10.7163 -5.9019 38 1 4.2381 9.0761 -7.3357 39 1 4.8044 10.0708 -3.2835 40 1 3.4006 11.2962 -4.8479 41 1 7.7896 8.7055 -7.2347 42 1 8.5912 5.5812 -7.2095 43 1 9.6853 6.8990 -6.7252 44 1 9.2913 5.6007 -5.5731 45 1 3.2292 4.3464 -1.5584 46 1 4.0383 2.8545 -2.2069 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_10803934.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:01:35 Heat of formation + Delta-G solvation = -118.846396 kcal Electronic energy + Delta-G solvation = -29536.897311 eV Core-core repulsion = 25202.541208 eV Total energy + Delta-G solvation = -4334.356103 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.161 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -42.63155 -42.08240 -40.77642 -39.78811 -37.73529 -37.63192 -36.11391 -35.54812 -33.98114 -32.72079 -31.35404 -29.37184 -28.48252 -27.13778 -26.39559 -25.67279 -24.01661 -23.34088 -21.94525 -21.21869 -20.88926 -20.85288 -19.43984 -18.71678 -17.80447 -17.70690 -17.42034 -17.39488 -17.18659 -16.92041 -16.57752 -16.22035 -16.02320 -15.71391 -15.34197 -15.21471 -15.05356 -14.86874 -14.62706 -14.36070 -14.24397 -14.01230 -13.93416 -13.76209 -13.63889 -13.35083 -13.27690 -13.18435 -12.98394 -12.80568 -12.62593 -12.37718 -12.16492 -11.96396 -11.78743 -11.52413 -11.45297 -11.10572 -11.00258 -10.40012 -10.35441 -9.80445 -9.29084 -5.01719 0.36090 1.15987 1.36096 1.41948 1.49179 1.64414 1.70769 2.00510 2.16361 2.25108 2.65341 3.00504 3.24095 3.32432 3.36905 3.53747 3.59169 3.80401 3.84917 3.93884 3.96386 3.99303 4.07551 4.11234 4.20924 4.25164 4.26997 4.28080 4.45008 4.48408 4.57587 4.59229 4.60999 4.66428 4.69065 4.72417 4.78708 4.80358 4.98600 5.00797 5.04248 5.11372 5.46393 5.58258 5.84921 6.07076 6.19661 6.30641 6.65576 6.74857 7.01312 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.471 3.529 5 O -0.505 6.505 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.100 4.100 9 C 0.097 3.903 10 O -0.529 6.529 11 C 0.107 3.893 12 N -0.721 5.721 13 C 0.594 3.406 14 O -0.540 6.540 15 C -0.050 4.050 16 C -0.135 4.135 17 C -0.209 4.209 18 C -0.035 4.035 19 O -0.546 6.546 20 Si 0.692 3.308 21 C 0.052 3.948 22 N -0.406 5.406 23 C 0.062 3.938 24 C -0.145 4.145 25 H 0.067 0.933 26 H 0.067 0.933 27 H 0.081 0.919 28 H 0.071 0.929 29 H 0.071 0.929 30 H 0.115 0.885 31 H 0.094 0.906 32 H 0.378 0.622 33 H 0.087 0.913 34 H 0.083 0.917 35 H 0.399 0.601 36 H 0.148 0.852 37 H 0.109 0.891 38 H 0.378 0.622 39 H -0.256 1.256 40 H -0.259 1.259 41 H 0.173 0.827 42 H 0.080 0.920 43 H 0.085 0.915 44 H 0.105 0.895 45 H 0.093 0.907 46 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.631 0.431 -0.566 3.700 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.392 6.392 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.138 4.138 9 C 0.055 3.945 10 O -0.335 6.335 11 C -0.017 4.017 12 N -0.375 5.375 13 C 0.382 3.618 14 O -0.419 6.419 15 C -0.163 4.163 16 C -0.162 4.162 17 C -0.215 4.215 18 C -0.146 4.146 19 O -0.351 6.351 20 Si 0.594 3.406 21 C -0.085 4.085 22 N -0.078 5.078 23 C -0.079 4.079 24 C -0.183 4.183 25 H 0.087 0.913 26 H 0.086 0.914 27 H 0.100 0.900 28 H 0.089 0.911 29 H 0.089 0.911 30 H 0.133 0.867 31 H 0.113 0.887 32 H 0.227 0.773 33 H 0.105 0.895 34 H 0.102 0.898 35 H 0.235 0.765 36 H 0.165 0.835 37 H 0.126 0.874 38 H 0.225 0.775 39 H -0.181 1.181 40 H -0.184 1.184 41 H 0.190 0.810 42 H 0.099 0.901 43 H 0.103 0.897 44 H 0.123 0.877 45 H 0.111 0.889 46 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -2.404 -0.103 0.259 2.420 hybrid contribution 0.252 0.558 -0.654 0.896 sum -2.152 0.455 -0.396 2.235 Atomic orbital electron populations 1.21821 0.92313 1.03267 1.03671 1.23093 0.95632 0.79862 1.02759 1.86520 1.24347 1.32733 1.83656 1.23519 0.80710 0.92290 0.72150 1.90687 1.60519 1.42928 1.45097 1.22413 0.97222 0.91049 1.01465 0.84987 1.23056 0.93298 0.96555 1.00888 1.22378 0.93712 0.85575 0.92808 1.86609 1.96042 1.14480 1.36393 1.21972 1.00054 0.89413 0.90217 1.45476 1.35855 1.28015 1.28144 1.16914 0.80642 0.84547 0.79668 1.90828 1.36999 1.43818 1.70220 1.19856 0.98942 0.99297 0.98254 1.21145 0.99803 0.93953 1.01253 1.19772 1.00807 0.99702 1.01245 1.24381 1.00851 0.95621 0.93796 1.86484 1.61939 1.53947 1.32717 0.94864 0.82550 0.86406 0.76732 1.21940 0.97907 0.87682 1.01019 1.43922 1.22722 1.17134 1.23978 1.22374 0.86347 0.96647 1.02508 1.23687 0.98215 1.01040 0.95343 0.91343 0.91359 0.90016 0.91104 0.91077 0.86710 0.88709 0.77326 0.89479 0.89829 0.76548 0.83498 0.87383 0.77492 1.18079 1.18357 0.81026 0.90146 0.89669 0.87650 0.88873 0.88259 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.29 10.29 37.16 0.38 0.67 16 2 C 0.06 0.00 6.19 37.16 0.23 0.23 16 3 O -0.36 -0.46 10.22 -39.26 -0.40 -0.86 16 4 C 0.47 0.71 7.49 36.01 0.27 0.98 16 5 O -0.50 -2.18 15.65 -18.75 -0.29 -2.47 16 6 C -0.10 0.13 4.19 -90.96 -0.38 -0.25 16 7 H 0.13 -0.27 8.14 -51.93 -0.42 -0.70 16 8 C -0.10 0.13 6.79 -25.92 -0.18 -0.04 16 9 C 0.10 -0.26 1.48 -89.81 -0.13 -0.39 16 10 O -0.53 1.28 13.40 -35.23 -0.47 0.81 16 11 C 0.11 -0.18 5.33 -4.04 -0.02 -0.20 16 12 N -0.72 1.53 5.33 -61.62 -0.33 1.20 16 13 C 0.59 0.70 7.77 -12.85 -0.10 0.60 16 14 O -0.54 -2.40 14.67 5.19 0.08 -2.33 16 15 C -0.05 -0.03 6.88 -81.98 -0.56 -0.59 16 16 C -0.14 0.18 8.84 -39.12 -0.35 -0.17 16 17 C -0.21 0.11 5.40 -105.02 -0.57 -0.46 16 18 C -0.03 0.03 3.00 36.00 0.11 0.14 16 19 O -0.55 0.12 12.88 -35.23 -0.45 -0.34 16 20 Si 0.69 -1.35 30.65 -169.99 -5.21 -6.56 16 21 C 0.05 -0.01 11.29 -16.91 -0.19 -0.20 16 22 N -0.41 -0.22 3.16 -120.23 -0.38 -0.60 16 23 C 0.06 -0.05 10.64 59.85 0.64 0.59 16 24 C -0.15 0.43 7.02 -25.92 -0.18 0.25 16 25 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 26 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 27 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 28 H 0.07 0.00 8.13 -51.93 -0.42 -0.42 16 29 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 30 H 0.11 -0.09 7.40 -51.93 -0.38 -0.47 16 31 H 0.09 -0.11 8.14 -51.92 -0.42 -0.54 16 32 H 0.38 -2.15 7.33 45.56 0.33 -1.82 16 33 H 0.09 -0.09 7.94 -51.93 -0.41 -0.50 16 34 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 35 H 0.40 -2.02 5.94 -40.82 -0.24 -2.26 16 36 H 0.15 -0.66 5.79 -52.49 -0.30 -0.96 16 37 H 0.11 -0.04 7.96 -51.93 -0.41 -0.45 16 38 H 0.38 -1.46 8.70 45.56 0.40 -1.07 16 39 H -0.26 -0.02 7.11 56.52 0.40 0.38 16 40 H -0.26 -0.43 7.11 56.52 0.40 -0.03 16 41 H 0.17 -0.31 8.06 -52.48 -0.42 -0.73 16 42 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 43 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 44 H 0.10 0.08 6.23 -51.93 -0.32 -0.24 16 45 H 0.09 -0.40 8.14 -51.93 -0.42 -0.83 16 46 H 0.10 -0.27 7.92 -51.93 -0.41 -0.68 16 LS Contribution 385.59 15.07 5.81 5.81 Total: 0.00 -10.60 385.59 -8.72 -19.32 By element: Atomic # 1 Polarization: -9.10 SS G_CDS: -6.03 Total: -15.13 kcal Atomic # 6 Polarization: 2.19 SS G_CDS: -1.04 Total: 1.15 kcal Atomic # 7 Polarization: 1.31 SS G_CDS: -0.71 Total: 0.60 kcal Atomic # 8 Polarization: -3.65 SS G_CDS: -1.54 Total: -5.19 kcal Atomic # 14 Polarization: -1.35 SS G_CDS: -5.21 Total: -6.56 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -10.60 -8.72 -19.32 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_10803934.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.531 kcal (2) G-P(sol) polarization free energy of solvation -10.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.127 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.719 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.316 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.846 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds