Wall clock time and date at job start Sun Mar 7 2021 07:01:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45199 * 109.47331 * 2 1 4 4 C 1.34227 * 117.00337 * 180.02562 * 3 2 1 5 5 O 1.20832 * 119.99560 * 359.97438 * 4 3 2 6 6 C 1.50697 * 120.00204 * 180.27492 * 4 3 2 7 7 H 1.09007 * 112.84502 * 310.91601 * 6 4 3 8 8 C 1.53780 * 113.61508 * 82.22038 * 6 4 3 9 9 C 1.53780 * 87.07997 * 139.98397 * 8 6 4 10 10 O 1.42903 * 113.61540 * 89.11524 * 9 8 6 11 11 C 1.53000 * 113.61345 * 220.01871 * 9 8 6 12 12 N 1.46495 * 109.47054 * 282.49248 * 11 9 8 13 13 C 1.34776 * 119.99724 * 179.97438 * 12 11 9 14 14 O 1.21696 * 120.00360 * 354.94466 * 13 12 11 15 15 C 1.46687 * 119.99916 * 174.94153 * 13 12 11 16 16 C 1.37868 * 126.23160 * 4.96296 * 15 13 12 17 17 C 1.39836 * 107.08462 * 179.97438 * 16 15 13 18 18 C 1.35453 * 107.86238 * 0.02562 * 17 16 15 19 19 C 1.50703 * 125.55995 * 180.02562 * 18 17 16 20 20 O 1.42904 * 109.46818 * 149.97163 * 19 18 17 21 21 Si 1.86303 * 109.47290 * 29.97302 * 19 18 17 22 22 N 1.35528 * 108.87178 * 359.73054 * 18 17 16 23 23 C 1.46502 * 125.67582 * 180.30701 * 22 18 17 24 24 C 1.53780 * 87.08301 * 334.56681 * 9 8 6 25 25 H 1.08995 * 109.47552 * 300.00431 * 1 2 3 26 26 H 1.08999 * 109.47060 * 60.00376 * 1 2 3 27 27 H 1.09006 * 109.47100 * 180.02562 * 1 2 3 28 28 H 1.08995 * 109.47552 * 239.99569 * 2 1 3 29 29 H 1.09007 * 109.46900 * 119.99355 * 2 1 3 30 30 H 1.09000 * 113.61453 * 254.52947 * 8 6 4 31 31 H 1.08996 * 113.61654 * 25.43405 * 8 6 4 32 32 H 0.96694 * 114.00208 * 82.50397 * 10 9 8 33 33 H 1.08999 * 109.47224 * 42.50034 * 11 9 8 34 34 H 1.09007 * 109.46932 * 162.49639 * 11 9 8 35 35 H 0.96994 * 120.00409 * 0.02562 * 12 11 9 36 36 H 1.08005 * 126.45893 * 359.96075 * 16 15 13 37 37 H 1.07996 * 126.06490 * 179.97438 * 17 16 15 38 38 H 1.09001 * 109.47295 * 269.97260 * 19 18 17 39 39 H 0.96698 * 114.00041 * 299.99926 * 20 19 18 40 40 H 1.48504 * 109.99829 * 58.68044 * 21 19 18 41 41 H 1.48494 * 110.00099 * 179.97438 * 21 19 18 42 42 H 1.09002 * 109.46982 * 275.95433 * 23 22 18 43 43 H 1.08994 * 109.47598 * 35.95507 * 23 22 18 44 44 H 1.09003 * 109.47061 * 155.95698 * 23 22 18 45 45 H 1.09000 * 113.61712 * 270.88816 * 24 9 8 46 46 H 1.09002 * 113.69819 * 139.99047 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5865 -0.0005 6 6 3.9207 2.9374 0.0057 7 1 3.4737 3.5836 -0.7498 8 6 3.9814 3.5727 1.4048 9 6 5.3530 4.1394 1.0019 10 8 5.2804 5.4190 0.3698 11 6 6.3913 4.0878 2.1245 12 7 6.1355 5.1715 3.0764 13 6 6.9297 5.3226 4.1547 14 8 7.8015 4.5061 4.3877 15 6 6.7434 6.4715 5.0476 16 6 5.7428 7.4160 4.9622 17 6 5.9447 8.3239 6.0064 18 6 7.0412 7.9272 6.6958 19 6 7.6164 8.6222 7.9029 20 8 8.2517 7.6609 8.7482 21 14 6.2485 9.4682 8.8431 22 7 7.5325 6.7996 6.1266 23 6 8.7092 6.0553 6.5825 24 6 5.4583 2.9681 0.0111 25 1 -0.3634 0.5139 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 1.8934 -0.5139 -0.8899 29 1 1.8933 -0.5138 0.8901 30 1 3.2238 4.3388 1.5697 31 1 4.0307 2.8437 2.2136 32 1 5.2141 6.1598 0.9877 33 1 6.3233 3.1290 2.6384 34 1 7.3894 4.2035 1.7018 35 1 5.3941 5.7799 2.9311 36 1 4.9521 7.4488 4.2272 37 1 5.3352 9.1884 6.2240 38 1 8.3484 9.3631 7.5812 39 1 7.6585 6.9696 9.0727 40 1 5.2279 8.4732 9.2599 41 1 6.8028 10.1568 10.0362 42 1 9.6091 6.5074 6.1655 43 1 8.7586 6.0849 7.6709 44 1 8.6353 5.0198 6.2502 45 1 5.9113 2.0737 0.4389 46 1 5.8928 3.2445 -0.9496 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_10803936.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:01:39 Heat of formation + Delta-G solvation = -117.664911 kcal Electronic energy + Delta-G solvation = -29521.011960 eV Core-core repulsion = 25186.707090 eV Total energy + Delta-G solvation = -4334.304870 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.161 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.65958 -42.08359 -40.77679 -39.80189 -38.00626 -37.63929 -36.06830 -35.55202 -33.78104 -32.72276 -31.75218 -29.70044 -27.55962 -27.21596 -26.96857 -25.78211 -23.86310 -23.13730 -21.95532 -21.50083 -20.85808 -20.72262 -19.27555 -18.72699 -18.41087 -17.70378 -17.53929 -17.37398 -17.14019 -16.99319 -16.50951 -16.16763 -16.09963 -15.69647 -15.38749 -15.14063 -14.94881 -14.83938 -14.50439 -14.36718 -14.32568 -14.22846 -13.91613 -13.85621 -13.62732 -13.31993 -13.17489 -12.98392 -12.97933 -12.81384 -12.62173 -12.37898 -12.36605 -11.98446 -11.79249 -11.52565 -11.44877 -11.22106 -11.01803 -10.81992 -10.33449 -9.78315 -9.14467 -5.02501 0.34579 1.06093 1.16152 1.43466 1.60659 1.63702 1.68745 1.91096 2.24278 2.32256 2.67292 3.01694 3.02093 3.25480 3.33285 3.37855 3.49172 3.67050 3.85265 3.93655 3.95515 3.99193 4.07925 4.24974 4.26905 4.27850 4.34994 4.39607 4.45395 4.45703 4.48585 4.60521 4.68849 4.72063 4.78492 4.78637 4.81349 4.93933 4.99135 5.00606 5.07650 5.15947 5.46372 5.61964 5.92284 6.07624 6.14122 6.25317 6.33328 6.74881 7.05250 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.470 3.530 5 O -0.505 6.505 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.145 4.145 9 C 0.098 3.902 10 O -0.530 6.530 11 C 0.107 3.893 12 N -0.721 5.721 13 C 0.594 3.406 14 O -0.541 6.541 15 C -0.055 4.055 16 C -0.135 4.135 17 C -0.197 4.197 18 C 0.014 3.986 19 C -0.057 4.057 20 O -0.532 6.532 21 Si 0.720 3.280 22 N -0.391 5.391 23 C 0.050 3.950 24 C -0.100 4.100 25 H 0.067 0.933 26 H 0.068 0.932 27 H 0.081 0.919 28 H 0.071 0.929 29 H 0.070 0.930 30 H 0.092 0.908 31 H 0.098 0.902 32 H 0.379 0.621 33 H 0.086 0.914 34 H 0.084 0.916 35 H 0.400 0.600 36 H 0.147 0.853 37 H 0.154 0.846 38 H 0.124 0.876 39 H 0.378 0.622 40 H -0.257 1.257 41 H -0.255 1.255 42 H 0.074 0.926 43 H 0.100 0.900 44 H 0.104 0.896 45 H 0.114 0.886 46 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.006 4.040 -0.045 6.433 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.392 6.392 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.183 4.183 9 C 0.056 3.944 10 O -0.336 6.336 11 C -0.017 4.017 12 N -0.375 5.375 13 C 0.382 3.618 14 O -0.420 6.420 15 C -0.169 4.169 16 C -0.161 4.161 17 C -0.221 4.221 18 C -0.104 4.104 19 C -0.166 4.166 20 O -0.338 6.338 21 Si 0.618 3.382 22 N -0.063 5.063 23 C -0.090 4.090 24 C -0.138 4.138 25 H 0.086 0.914 26 H 0.087 0.913 27 H 0.100 0.900 28 H 0.089 0.911 29 H 0.089 0.911 30 H 0.110 0.890 31 H 0.116 0.884 32 H 0.228 0.772 33 H 0.104 0.896 34 H 0.102 0.898 35 H 0.236 0.764 36 H 0.164 0.836 37 H 0.172 0.828 38 H 0.142 0.858 39 H 0.226 0.774 40 H -0.181 1.181 41 H -0.179 1.179 42 H 0.093 0.907 43 H 0.118 0.882 44 H 0.123 0.877 45 H 0.133 0.867 46 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -3.710 2.943 0.309 4.746 hybrid contribution -0.094 -0.739 0.569 0.937 sum -3.804 2.204 0.878 4.483 Atomic orbital electron populations 1.21821 0.92311 1.03270 1.03665 1.23093 0.95633 0.79865 1.02758 1.86517 1.24362 1.32740 1.83658 1.23531 0.80703 0.92310 0.72143 1.90690 1.60525 1.42921 1.45105 1.22417 0.97248 0.91045 1.01399 0.84968 1.23666 0.98272 1.01055 0.95304 1.22357 0.93655 0.85537 0.92817 1.86596 1.96233 1.14337 1.36398 1.21959 0.99664 0.91312 0.88755 1.45466 1.33326 1.33760 1.24910 1.16949 0.81097 0.83702 0.80035 1.90810 1.34113 1.44198 1.72871 1.19972 0.99212 1.01535 0.96165 1.21276 0.98895 0.95122 1.00851 1.20551 0.99278 1.03063 0.99178 1.21107 0.98229 0.91280 0.99765 1.24953 1.07223 0.94590 0.89802 1.86597 1.39260 1.41097 1.66881 0.94403 0.76829 0.85084 0.81898 1.43768 1.21889 1.19891 1.20776 1.22644 0.85405 0.98426 1.02573 1.23053 0.93280 0.96640 1.00831 0.91383 0.91330 0.90002 0.91056 0.91127 0.88957 0.88355 0.77211 0.89584 0.89808 0.76442 0.83559 0.82826 0.85804 0.77369 1.18123 1.17918 0.90704 0.88165 0.87727 0.86745 0.88679 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.25 10.29 37.16 0.38 0.63 16 2 C 0.06 0.02 6.19 37.16 0.23 0.25 16 3 O -0.36 -0.58 10.22 -39.25 -0.40 -0.98 16 4 C 0.47 0.87 7.48 36.00 0.27 1.14 16 5 O -0.50 -2.34 15.65 -18.75 -0.29 -2.64 16 6 C -0.10 0.09 4.19 -90.96 -0.38 -0.29 16 7 H 0.13 -0.23 8.14 -51.93 -0.42 -0.66 16 8 C -0.15 0.37 7.01 -25.92 -0.18 0.18 16 9 C 0.10 -0.22 1.42 -89.81 -0.13 -0.35 16 10 O -0.53 1.15 13.41 -35.23 -0.47 0.68 16 11 C 0.11 -0.13 5.26 -4.04 -0.02 -0.15 16 12 N -0.72 1.19 5.30 -61.62 -0.33 0.86 16 13 C 0.59 1.14 7.77 -12.85 -0.10 1.04 16 14 O -0.54 -2.89 14.55 5.19 0.08 -2.81 16 15 C -0.05 -0.07 6.89 -81.98 -0.56 -0.64 16 16 C -0.14 0.14 10.35 -39.12 -0.41 -0.27 16 17 C -0.20 0.22 9.37 -39.98 -0.37 -0.16 16 18 C 0.01 0.00 6.15 -81.95 -0.50 -0.50 16 19 C -0.06 0.07 2.99 36.01 0.11 0.17 16 20 O -0.53 0.11 10.11 -35.23 -0.36 -0.25 16 21 Si 0.72 -1.60 31.10 -169.99 -5.29 -6.89 16 22 N -0.39 -0.62 3.16 -115.62 -0.37 -0.98 16 23 C 0.05 0.06 10.30 59.85 0.62 0.67 16 24 C -0.10 0.10 6.80 -25.92 -0.18 -0.08 16 25 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 26 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 27 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 28 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 29 H 0.07 0.02 8.14 -51.92 -0.42 -0.40 16 30 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 31 H 0.10 -0.20 7.99 -51.93 -0.41 -0.62 16 32 H 0.38 -2.06 7.60 45.56 0.35 -1.71 16 33 H 0.09 -0.03 8.05 -51.93 -0.42 -0.45 16 34 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 35 H 0.40 -1.85 6.23 -40.82 -0.25 -2.10 16 36 H 0.15 -0.63 7.45 -52.48 -0.39 -1.02 16 37 H 0.15 -0.61 6.85 -52.49 -0.36 -0.97 16 38 H 0.12 -0.23 7.96 -51.93 -0.41 -0.64 16 39 H 0.38 -0.96 8.29 45.56 0.38 -0.58 16 40 H -0.26 -0.10 7.11 56.52 0.40 0.30 16 41 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 42 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 43 H 0.10 -0.02 5.24 -51.93 -0.27 -0.30 16 44 H 0.10 0.27 5.92 -51.93 -0.31 -0.04 16 45 H 0.11 -0.04 7.39 -51.93 -0.38 -0.42 16 46 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 LS Contribution 380.58 15.07 5.74 5.74 Total: 0.00 -10.38 380.58 -8.84 -19.21 By element: Atomic # 1 Polarization: -7.68 SS G_CDS: -5.91 Total: -13.60 kcal Atomic # 6 Polarization: 2.89 SS G_CDS: -1.23 Total: 1.66 kcal Atomic # 7 Polarization: 0.57 SS G_CDS: -0.69 Total: -0.12 kcal Atomic # 8 Polarization: -4.55 SS G_CDS: -1.45 Total: -6.00 kcal Atomic # 14 Polarization: -1.60 SS G_CDS: -5.29 Total: -6.89 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -10.38 -8.84 -19.21 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_10803936.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.453 kcal (2) G-P(sol) polarization free energy of solvation -10.375 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.829 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.836 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.211 kcal (6) G-S(sol) free energy of system = (1) + (5) -117.665 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds