Wall clock time and date at job start Sun Mar 7 2021 07:01:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 O 1.45197 * 109.47205 * 2 1 4 4 C 1.34221 * 117.00449 * 180.02562 * 3 2 1 5 5 O 1.20829 * 119.99991 * 0.02562 * 4 3 2 6 6 C 1.50700 * 120.00393 * 179.97438 * 4 3 2 7 7 H 1.09004 * 112.91080 * 311.25226 * 6 4 3 8 8 C 1.53956 * 113.66421 * 82.44021 * 6 4 3 9 9 C 1.53787 * 87.01952 * 139.93364 * 8 6 4 10 10 O 1.42898 * 113.61479 * 89.22575 * 9 8 6 11 11 C 1.53000 * 113.61593 * 220.04550 * 9 8 6 12 12 N 1.46499 * 109.47043 * 284.13980 * 11 9 8 13 13 C 1.34781 * 119.99573 * 179.97438 * 12 11 9 14 14 O 1.21723 * 120.00041 * 0.02562 * 13 12 11 15 15 C 1.46562 * 119.99584 * 179.97438 * 13 12 11 16 16 C 1.40860 * 126.57884 * 180.02562 * 15 13 12 17 17 C 1.40089 * 132.86291 * 359.97225 * 16 15 13 18 18 C 1.36444 * 119.25717 * 179.97438 * 17 16 15 19 19 C 1.50703 * 120.29982 * 180.02562 * 18 17 16 20 20 O 1.42900 * 109.46861 * 120.00081 * 19 18 17 21 21 Si 1.86293 * 109.47076 * 239.99926 * 19 18 17 22 22 C 1.40161 * 119.40493 * 0.02562 * 18 17 16 23 23 C 1.35187 * 120.32346 * 0.02562 * 22 18 17 24 24 N 1.36244 * 120.70164 * 359.96056 * 23 22 18 25 25 N 1.40022 * 132.01175 * 180.02562 * 24 23 22 26 26 C 1.30744 * 109.60084 * 179.97438 * 25 24 23 27 27 C 1.53777 * 87.17138 * 334.63880 * 9 8 6 28 28 H 1.08999 * 109.47729 * 60.00176 * 1 2 3 29 29 H 1.09007 * 109.47074 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47040 * 299.99774 * 1 2 3 31 31 H 1.09009 * 109.46828 * 240.00159 * 2 1 3 32 32 H 1.08995 * 109.47759 * 120.00335 * 2 1 3 33 33 H 1.09003 * 113.61510 * 25.41595 * 8 6 4 34 34 H 1.09001 * 113.66573 * 254.45819 * 8 6 4 35 35 H 0.96707 * 114.00071 * 80.86379 * 10 9 8 36 36 H 1.08996 * 109.46944 * 164.13173 * 11 9 8 37 37 H 1.09003 * 109.46899 * 44.13837 * 11 9 8 38 38 H 0.96995 * 120.00485 * 359.97438 * 12 11 9 39 39 H 1.08003 * 120.37523 * 359.97438 * 17 16 15 40 40 H 1.08994 * 109.46940 * 0.02562 * 19 18 17 41 41 H 0.96697 * 113.99803 * 180.02562 * 20 19 18 42 42 H 1.48507 * 109.99778 * 178.67800 * 21 19 18 43 43 H 1.48497 * 110.00726 * 300.00008 * 21 19 18 44 44 H 1.08005 * 119.84031 * 180.02562 * 22 18 17 45 45 H 1.07992 * 119.65085 * 179.97438 * 23 22 18 46 46 H 1.08001 * 125.62455 * 180.02562 * 26 25 24 47 47 H 1.09003 * 113.61846 * 139.93940 * 27 9 8 48 48 H 1.09006 * 113.61674 * 270.75595 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3446 1.5449 -0.0005 5 8 4.0807 0.5867 -0.0015 6 6 3.9206 2.9374 -0.0012 7 1 3.4707 3.5824 -0.7560 8 6 3.9859 3.5798 1.3965 9 6 5.3567 4.1428 0.9856 10 8 5.2836 5.4204 0.3496 11 6 6.3993 4.0949 2.1044 12 7 6.1252 5.1591 3.0732 13 6 6.9197 5.3097 4.1514 14 8 7.8652 4.5619 4.3200 15 6 6.6458 6.3748 5.1203 16 6 7.3812 6.6565 6.2882 17 6 8.5151 6.0701 6.8651 18 6 9.0088 6.5786 8.0310 19 6 10.2278 5.9663 8.6717 20 8 11.2602 6.9497 8.7675 21 14 9.7922 5.3550 10.3767 22 6 8.3721 7.6755 8.6275 23 6 7.2783 8.2249 8.0536 24 7 6.7781 7.7243 6.8893 25 7 5.6822 8.0990 6.1025 26 6 5.5990 7.3108 5.0626 27 6 5.4581 2.9682 -0.0017 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 1.8932 -0.5139 -0.8901 32 1 1.8934 -0.5138 0.8899 33 1 4.0374 2.8544 2.2085 34 1 3.2299 4.3477 1.5608 35 1 5.1961 6.1615 0.9647 36 1 7.3935 4.2363 1.6807 37 1 6.3516 3.1274 2.6042 38 1 5.3720 5.7553 2.9386 39 1 8.9933 5.2249 6.3923 40 1 10.5769 5.1315 8.0641 41 1 12.0766 6.6247 9.1710 42 1 10.9778 4.7203 11.0069 43 1 9.3150 6.4841 11.2148 44 1 8.7572 8.0839 9.5503 45 1 6.7960 9.0695 8.5228 46 1 4.8497 7.3696 4.2870 47 1 5.8890 3.2429 -0.9645 48 1 5.9142 2.0757 0.4268 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_11618758.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:01:44 Heat of formation + Delta-G solvation = -61.435528 kcal Electronic energy + Delta-G solvation = -33581.290212 eV Core-core repulsion = 28799.319298 eV Total energy + Delta-G solvation = -4781.970914 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.156 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -43.29790 -42.05219 -40.76413 -39.83083 -39.18348 -37.60121 -37.44049 -35.93759 -35.27401 -34.26975 -32.69488 -32.17562 -30.87414 -29.28770 -27.38863 -27.04644 -26.21176 -24.86756 -23.90923 -23.45263 -22.89318 -21.85446 -21.28017 -20.80399 -19.47492 -18.84969 -18.59396 -18.13521 -17.88079 -17.65440 -17.37617 -17.20982 -16.94557 -16.88881 -16.58588 -16.33039 -15.91957 -15.87526 -15.64427 -15.20268 -15.01534 -14.70163 -14.51475 -14.29569 -14.21446 -14.10274 -14.08572 -13.87119 -13.56823 -13.30963 -13.23840 -13.04760 -12.94569 -12.75994 -12.74045 -12.59281 -12.33037 -12.14286 -11.95920 -11.70976 -11.58984 -11.49846 -11.40620 -10.96126 -10.88118 -10.81494 -10.30957 -10.14700 -8.77336 -5.09075 -0.57585 -0.12017 0.99021 1.03917 1.08839 1.19519 1.45941 1.66142 1.76356 2.03210 2.11475 2.55111 2.74153 2.93520 3.06175 3.10379 3.32831 3.39924 3.43336 3.45367 3.51044 3.68092 3.83728 3.89021 3.95911 3.97029 4.01858 4.12374 4.13967 4.23102 4.29865 4.30306 4.34866 4.50746 4.52158 4.54288 4.69727 4.72779 4.74789 4.80826 4.81053 4.87843 5.02350 5.04760 5.09401 5.13472 5.24007 5.34671 5.49342 5.64266 6.24156 6.29029 6.35306 6.48274 6.78263 7.31651 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.471 3.529 5 O -0.505 6.505 6 C -0.103 4.103 7 H 0.132 0.868 8 C -0.145 4.145 9 C 0.098 3.902 10 O -0.531 6.531 11 C 0.108 3.892 12 N -0.732 5.732 13 C 0.605 3.395 14 O -0.545 6.545 15 C -0.318 4.318 16 C 0.171 3.829 17 C -0.093 4.093 18 C -0.024 4.024 19 C -0.077 4.077 20 O -0.532 6.532 21 Si 0.692 3.308 22 C -0.144 4.144 23 C 0.116 3.884 24 N -0.264 5.264 25 N -0.312 5.312 26 C 0.119 3.881 27 C -0.100 4.100 28 H 0.067 0.933 29 H 0.081 0.919 30 H 0.067 0.933 31 H 0.071 0.929 32 H 0.071 0.929 33 H 0.098 0.902 34 H 0.091 0.909 35 H 0.379 0.621 36 H 0.082 0.918 37 H 0.084 0.916 38 H 0.394 0.606 39 H 0.165 0.835 40 H 0.085 0.915 41 H 0.385 0.615 42 H -0.251 1.251 43 H -0.248 1.248 44 H 0.160 0.840 45 H 0.178 0.822 46 H 0.198 0.802 47 H 0.094 0.906 48 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.957 0.282 2.817 4.094 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.392 6.392 6 C -0.122 4.122 7 H 0.149 0.851 8 C -0.183 4.183 9 C 0.056 3.944 10 O -0.337 6.337 11 C -0.016 4.016 12 N -0.385 5.385 13 C 0.394 3.606 14 O -0.423 6.423 15 C -0.333 4.333 16 C 0.050 3.950 17 C -0.113 4.113 18 C -0.029 4.029 19 C -0.186 4.186 20 O -0.340 6.340 21 Si 0.590 3.410 22 C -0.165 4.165 23 C -0.010 4.010 24 N -0.028 5.028 25 N -0.132 5.132 26 C -0.062 4.062 27 C -0.138 4.138 28 H 0.086 0.914 29 H 0.100 0.900 30 H 0.086 0.914 31 H 0.089 0.911 32 H 0.089 0.911 33 H 0.117 0.883 34 H 0.109 0.891 35 H 0.227 0.773 36 H 0.101 0.899 37 H 0.102 0.898 38 H 0.229 0.771 39 H 0.183 0.817 40 H 0.103 0.897 41 H 0.234 0.766 42 H -0.175 1.175 43 H -0.171 1.171 44 H 0.177 0.823 45 H 0.195 0.805 46 H 0.214 0.786 47 H 0.112 0.888 48 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -2.964 0.523 3.497 4.614 hybrid contribution 0.918 0.257 -0.219 0.978 sum -2.045 0.780 3.278 3.942 Atomic orbital electron populations 1.21821 0.92343 1.03254 1.03651 1.23087 0.95610 0.79895 1.02756 1.86516 1.24405 1.32714 1.83677 1.23535 0.80675 0.92324 0.72134 1.90687 1.60509 1.42927 1.45099 1.22456 0.97294 0.90974 1.01453 0.85059 1.23696 0.98287 1.01017 0.95289 1.22371 0.93696 0.85448 0.92905 1.86591 1.96052 1.14530 1.36509 1.21890 0.99312 0.91874 0.88527 1.45562 1.32631 1.35384 1.24888 1.16781 0.81532 0.82500 0.79803 1.90802 1.29723 1.45836 1.75941 1.19525 1.04492 1.07692 1.01592 1.19219 0.93826 0.88904 0.93083 1.20663 0.94444 1.01945 0.94230 1.19361 0.95084 0.94684 0.93817 1.24733 0.88496 0.94216 1.11148 1.86575 1.25434 1.38025 1.83971 0.94458 0.87358 0.85101 0.74056 1.20804 0.95285 0.97788 1.02611 1.21573 0.95409 0.99609 0.84450 1.46083 1.19593 1.20784 1.16361 1.77644 1.03980 1.24954 1.06657 1.24030 0.96225 0.90614 0.95344 1.23039 0.93161 0.96678 1.00889 0.91360 0.90015 0.91380 0.91078 0.91107 0.88307 0.89063 0.77273 0.89948 0.89776 0.77132 0.81745 0.89744 0.76610 1.17543 1.17138 0.82266 0.80518 0.78570 0.88776 0.86723 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.24 10.29 37.15 0.38 0.63 16 2 C 0.06 0.02 6.19 37.15 0.23 0.25 16 3 O -0.36 -0.60 10.22 -39.23 -0.40 -1.00 16 4 C 0.47 0.91 7.49 36.01 0.27 1.18 16 5 O -0.50 -2.36 15.65 -18.75 -0.29 -2.65 16 6 C -0.10 0.08 4.20 -90.87 -0.38 -0.30 16 7 H 0.13 -0.21 8.14 -51.93 -0.42 -0.63 16 8 C -0.15 0.36 7.03 -25.82 -0.18 0.18 16 9 C 0.10 -0.20 1.38 -89.81 -0.12 -0.33 16 10 O -0.53 1.01 13.41 -35.23 -0.47 0.54 16 11 C 0.11 -0.11 5.24 -4.04 -0.02 -0.13 16 12 N -0.73 1.13 5.32 -61.65 -0.33 0.80 16 13 C 0.60 1.24 7.78 -12.90 -0.10 1.14 16 14 O -0.54 -2.97 15.71 5.17 0.08 -2.89 16 15 C -0.32 -0.54 6.17 -104.68 -0.65 -1.18 16 16 C 0.17 0.42 6.76 -84.07 -0.57 -0.14 16 17 C -0.09 -0.13 9.35 -39.53 -0.37 -0.50 16 18 C -0.02 0.00 4.53 -104.55 -0.47 -0.48 16 19 C -0.08 0.11 2.80 36.01 0.10 0.21 16 20 O -0.53 0.26 12.76 -35.23 -0.45 -0.19 16 21 Si 0.69 -1.65 31.97 -169.99 -5.43 -7.09 16 22 C -0.14 0.10 8.67 -39.95 -0.35 -0.25 16 23 C 0.12 -0.04 11.18 -16.68 -0.19 -0.23 16 24 N -0.26 -0.53 3.86 -10.55 -0.04 -0.57 16 25 N -0.31 -0.68 12.58 30.75 0.39 -0.29 16 26 C 0.12 -0.02 11.44 -17.14 -0.20 -0.21 16 27 C -0.10 0.08 6.80 -25.92 -0.18 -0.09 16 28 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 29 H 0.08 -0.23 8.14 -51.92 -0.42 -0.65 16 30 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 31 H 0.07 0.03 8.13 -51.92 -0.42 -0.39 16 32 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 33 H 0.10 -0.20 8.01 -51.93 -0.42 -0.62 16 34 H 0.09 -0.34 8.14 -51.93 -0.42 -0.77 16 35 H 0.38 -1.99 7.72 45.56 0.35 -1.63 16 36 H 0.08 0.03 8.14 -51.93 -0.42 -0.40 16 37 H 0.08 -0.03 8.09 -51.93 -0.42 -0.45 16 38 H 0.39 -1.86 6.34 -40.82 -0.26 -2.12 16 39 H 0.17 0.24 7.01 -52.48 -0.37 -0.13 16 40 H 0.08 -0.22 7.71 -51.93 -0.40 -0.62 16 41 H 0.39 -1.68 8.74 45.56 0.40 -1.28 16 42 H -0.25 0.10 7.11 56.52 0.40 0.51 16 43 H -0.25 0.04 7.07 56.52 0.40 0.44 16 44 H 0.16 -0.35 7.52 -52.48 -0.39 -0.75 16 45 H 0.18 -0.54 8.06 -52.49 -0.42 -0.97 16 46 H 0.20 -0.95 7.46 -52.49 -0.39 -1.34 16 47 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 48 H 0.11 -0.03 7.40 -51.93 -0.38 -0.41 16 LS Contribution 410.25 15.07 6.18 6.18 Total: 0.00 -12.31 410.25 -9.27 -21.57 By element: Atomic # 1 Polarization: -8.45 SS G_CDS: -5.71 Total: -14.16 kcal Atomic # 6 Polarization: 2.53 SS G_CDS: -2.79 Total: -0.26 kcal Atomic # 7 Polarization: -0.07 SS G_CDS: 0.02 Total: -0.06 kcal Atomic # 8 Polarization: -4.66 SS G_CDS: -1.54 Total: -6.19 kcal Atomic # 14 Polarization: -1.65 SS G_CDS: -5.43 Total: -7.09 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -12.31 -9.27 -21.57 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_11618758.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.863 kcal (2) G-P(sol) polarization free energy of solvation -12.306 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.169 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.266 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.572 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.436 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds