Wall clock time and date at job start Sun Mar 7 2021 07:01:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 O 1.45197 * 109.47205 * 2 1 4 4 C 1.34221 * 117.00449 * 180.02562 * 3 2 1 5 5 O 1.20829 * 119.99991 * 0.02562 * 4 3 2 6 6 C 1.50700 * 120.00393 * 179.97438 * 4 3 2 7 7 H 1.09004 * 112.91080 * 311.25226 * 6 4 3 8 8 C 1.53956 * 113.66421 * 82.44021 * 6 4 3 9 9 C 1.53787 * 87.01952 * 139.93364 * 8 6 4 10 10 O 1.42898 * 113.61479 * 89.22575 * 9 8 6 11 11 C 1.53000 * 113.61593 * 220.04550 * 9 8 6 12 12 N 1.46499 * 109.47043 * 284.13980 * 11 9 8 13 13 C 1.34781 * 119.99573 * 179.97438 * 12 11 9 14 14 O 1.21723 * 120.00041 * 0.02562 * 13 12 11 15 15 C 1.46562 * 119.99584 * 179.97438 * 13 12 11 16 16 C 1.40860 * 126.57884 * 180.02562 * 15 13 12 17 17 C 1.40089 * 132.86291 * 359.97225 * 16 15 13 18 18 C 1.36444 * 119.25717 * 179.97438 * 17 16 15 19 19 C 1.50703 * 120.29982 * 180.02562 * 18 17 16 20 20 O 1.42900 * 109.46861 * 120.00081 * 19 18 17 21 21 Si 1.86293 * 109.47076 * 239.99926 * 19 18 17 22 22 C 1.40161 * 119.40493 * 0.02562 * 18 17 16 23 23 C 1.35187 * 120.32346 * 0.02562 * 22 18 17 24 24 N 1.36244 * 120.70164 * 359.96056 * 23 22 18 25 25 N 1.40022 * 132.01175 * 180.02562 * 24 23 22 26 26 C 1.30744 * 109.60084 * 179.97438 * 25 24 23 27 27 C 1.53777 * 87.17138 * 334.63880 * 9 8 6 28 28 H 1.08999 * 109.47729 * 60.00176 * 1 2 3 29 29 H 1.09007 * 109.47074 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47040 * 299.99774 * 1 2 3 31 31 H 1.09009 * 109.46828 * 240.00159 * 2 1 3 32 32 H 1.08995 * 109.47759 * 120.00335 * 2 1 3 33 33 H 1.09003 * 113.61510 * 25.41595 * 8 6 4 34 34 H 1.09001 * 113.66573 * 254.45819 * 8 6 4 35 35 H 0.96707 * 114.00071 * 80.86379 * 10 9 8 36 36 H 1.08996 * 109.46944 * 164.13173 * 11 9 8 37 37 H 1.09003 * 109.46899 * 44.13837 * 11 9 8 38 38 H 0.96995 * 120.00485 * 359.97438 * 12 11 9 39 39 H 1.08003 * 120.37523 * 359.97438 * 17 16 15 40 40 H 1.08994 * 109.46940 * 0.02562 * 19 18 17 41 41 H 0.96697 * 113.99803 * 180.02562 * 20 19 18 42 42 H 1.48507 * 109.99778 * 178.67800 * 21 19 18 43 43 H 1.48497 * 110.00726 * 300.00008 * 21 19 18 44 44 H 1.08005 * 119.84031 * 180.02562 * 22 18 17 45 45 H 1.07992 * 119.65085 * 179.97438 * 23 22 18 46 46 H 1.08001 * 125.62455 * 180.02562 * 26 25 24 47 47 H 1.09003 * 113.61846 * 139.93940 * 27 9 8 48 48 H 1.09006 * 113.61674 * 270.75595 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3446 1.5449 -0.0005 5 8 4.0807 0.5867 -0.0015 6 6 3.9206 2.9374 -0.0012 7 1 3.4707 3.5824 -0.7560 8 6 3.9859 3.5798 1.3965 9 6 5.3567 4.1428 0.9856 10 8 5.2836 5.4204 0.3496 11 6 6.3993 4.0949 2.1044 12 7 6.1252 5.1591 3.0732 13 6 6.9197 5.3097 4.1514 14 8 7.8652 4.5619 4.3200 15 6 6.6458 6.3748 5.1203 16 6 7.3812 6.6565 6.2882 17 6 8.5151 6.0701 6.8651 18 6 9.0088 6.5786 8.0310 19 6 10.2278 5.9663 8.6717 20 8 11.2602 6.9497 8.7675 21 14 9.7922 5.3550 10.3767 22 6 8.3721 7.6755 8.6275 23 6 7.2783 8.2249 8.0536 24 7 6.7781 7.7243 6.8893 25 7 5.6822 8.0990 6.1025 26 6 5.5990 7.3108 5.0626 27 6 5.4581 2.9682 -0.0017 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 1.8932 -0.5139 -0.8901 32 1 1.8934 -0.5138 0.8899 33 1 4.0374 2.8544 2.2085 34 1 3.2299 4.3477 1.5608 35 1 5.1961 6.1615 0.9647 36 1 7.3935 4.2363 1.6807 37 1 6.3516 3.1274 2.6042 38 1 5.3720 5.7553 2.9386 39 1 8.9933 5.2249 6.3923 40 1 10.5769 5.1315 8.0641 41 1 12.0766 6.6247 9.1710 42 1 10.9778 4.7203 11.0069 43 1 9.3150 6.4841 11.2148 44 1 8.7572 8.0839 9.5503 45 1 6.7960 9.0695 8.5228 46 1 4.8497 7.3696 4.2870 47 1 5.8890 3.2429 -0.9645 48 1 5.9142 2.0757 0.4268 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_11618758.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:01:43 Heat of formation + Delta-G solvation = -65.902287 kcal Electronic energy + Delta-G solvation = -33581.483905 eV Core-core repulsion = 28799.319298 eV Total energy + Delta-G solvation = -4782.164607 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.156 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -43.31025 -42.08686 -40.82463 -39.87672 -39.16483 -37.73842 -37.38627 -35.89133 -35.28615 -34.27521 -32.66516 -32.17971 -30.88167 -29.25564 -27.36194 -26.93347 -26.22107 -24.84985 -23.88622 -23.46460 -22.87369 -21.87921 -21.33384 -20.72709 -19.47621 -18.87065 -18.58430 -18.12254 -17.84204 -17.74234 -17.34336 -17.20495 -16.97190 -16.91235 -16.55453 -16.26587 -15.92515 -15.83528 -15.57815 -15.22647 -15.04661 -14.73297 -14.43080 -14.32345 -14.17805 -14.06563 -14.02894 -13.75980 -13.46582 -13.29847 -13.22589 -13.03669 -12.95694 -12.71516 -12.68608 -12.55039 -12.24894 -12.14187 -11.96323 -11.69289 -11.61554 -11.56193 -11.43244 -10.99411 -10.85729 -10.84452 -10.25616 -10.18539 -8.79771 -4.91028 -0.58709 -0.12607 1.00954 1.03795 1.06804 1.20960 1.60083 1.63192 1.86315 2.05228 2.13134 2.48073 2.91270 3.00841 3.14235 3.18130 3.42440 3.48768 3.51537 3.54093 3.63313 3.70897 3.86995 3.93678 3.96914 3.98344 4.04588 4.20465 4.24885 4.31986 4.34584 4.38067 4.39930 4.57607 4.62828 4.69707 4.73491 4.79603 4.82898 4.89502 4.91994 4.95430 5.11055 5.13007 5.15275 5.16631 5.28129 5.35899 5.43320 5.64629 6.29226 6.51920 6.52324 6.65793 6.70335 7.26677 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.470 3.530 5 O -0.539 6.539 6 C -0.101 4.101 7 H 0.144 0.856 8 C -0.135 4.135 9 C 0.115 3.885 10 O -0.540 6.540 11 C 0.112 3.888 12 N -0.712 5.712 13 C 0.602 3.398 14 O -0.588 6.588 15 C -0.337 4.337 16 C 0.151 3.849 17 C -0.113 4.113 18 C -0.020 4.020 19 C -0.087 4.087 20 O -0.551 6.551 21 Si 0.764 3.236 22 C -0.148 4.148 23 C 0.113 3.887 24 N -0.273 5.273 25 N -0.339 5.339 26 C 0.133 3.867 27 C -0.108 4.108 28 H 0.068 0.932 29 H 0.095 0.905 30 H 0.070 0.930 31 H 0.066 0.934 32 H 0.068 0.932 33 H 0.095 0.905 34 H 0.114 0.886 35 H 0.394 0.606 36 H 0.067 0.933 37 H 0.075 0.925 38 H 0.413 0.587 39 H 0.156 0.844 40 H 0.094 0.906 41 H 0.400 0.600 42 H -0.276 1.276 43 H -0.274 1.274 44 H 0.176 0.824 45 H 0.203 0.797 46 H 0.240 0.760 47 H 0.091 0.909 48 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.324 1.459 3.071 5.501 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.314 3.686 5 O -0.429 6.429 6 C -0.120 4.120 7 H 0.162 0.838 8 C -0.173 4.173 9 C 0.073 3.927 10 O -0.348 6.348 11 C -0.012 4.012 12 N -0.365 5.365 13 C 0.392 3.608 14 O -0.469 6.469 15 C -0.352 4.352 16 C 0.030 3.970 17 C -0.132 4.132 18 C -0.025 4.025 19 C -0.195 4.195 20 O -0.362 6.362 21 Si 0.664 3.336 22 C -0.169 4.169 23 C -0.012 4.012 24 N -0.037 5.037 25 N -0.159 5.159 26 C -0.048 4.048 27 C -0.146 4.146 28 H 0.087 0.913 29 H 0.114 0.886 30 H 0.089 0.911 31 H 0.084 0.916 32 H 0.086 0.914 33 H 0.113 0.887 34 H 0.133 0.867 35 H 0.246 0.754 36 H 0.086 0.914 37 H 0.094 0.906 38 H 0.250 0.750 39 H 0.174 0.826 40 H 0.112 0.888 41 H 0.252 0.748 42 H -0.202 1.202 43 H -0.199 1.199 44 H 0.193 0.807 45 H 0.220 0.780 46 H 0.256 0.744 47 H 0.110 0.890 48 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -4.370 1.732 3.727 5.999 hybrid contribution 1.386 -0.096 -0.283 1.418 sum -2.984 1.636 3.445 4.842 Atomic orbital electron populations 1.21824 0.90655 1.04251 1.03776 1.23255 0.96967 0.79428 1.02435 1.86525 1.24300 1.33408 1.83393 1.24094 0.80517 0.93006 0.70953 1.90670 1.61164 1.44250 1.46833 1.22571 0.96879 0.89609 1.02972 0.83797 1.23682 0.98372 1.01159 0.94046 1.22074 0.93485 0.85318 0.91778 1.86572 1.96009 1.14881 1.37345 1.21799 0.99078 0.91596 0.88740 1.45340 1.32429 1.35176 1.23596 1.16943 0.81272 0.82173 0.80391 1.90776 1.31686 1.47427 1.77049 1.19616 1.05501 1.08372 1.01675 1.19533 0.94309 0.89392 0.93759 1.20642 0.94998 1.02466 0.95118 1.19595 0.95281 0.94482 0.93187 1.24949 0.88048 0.94194 1.12260 1.86524 1.26420 1.38791 1.84451 0.93519 0.85446 0.83066 0.71552 1.21036 0.95205 0.97533 1.03096 1.22105 0.95339 0.99964 0.83804 1.46282 1.19709 1.20799 1.16909 1.77588 1.04587 1.26136 1.07586 1.24680 0.95972 0.88841 0.95291 1.23057 0.93358 0.97021 1.01148 0.91273 0.88609 0.91129 0.91550 0.91383 0.88654 0.86740 0.75446 0.91443 0.90639 0.74991 0.82613 0.88776 0.74837 1.20175 1.19947 0.80720 0.78002 0.74365 0.88992 0.87804 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.52 10.29 71.98 0.74 1.26 16 2 C 0.05 0.07 6.19 71.98 0.45 0.51 16 3 O -0.36 -1.31 10.22 -51.33 -0.52 -1.83 16 4 C 0.47 2.12 7.49 71.24 0.53 2.65 16 5 O -0.54 -5.87 15.65 21.95 0.34 -5.53 16 6 C -0.10 0.18 4.20 -10.95 -0.05 0.14 16 7 H 0.14 -0.60 8.14 -2.39 -0.02 -0.62 16 8 C -0.13 0.80 7.03 31.18 0.22 1.02 16 9 C 0.12 -0.53 1.38 -10.27 -0.01 -0.55 16 10 O -0.54 2.85 13.41 -148.98 -2.00 0.85 16 11 C 0.11 -0.17 5.24 86.38 0.45 0.28 16 12 N -0.71 2.39 5.32 -467.17 -2.49 -0.10 16 13 C 0.60 2.99 7.78 86.41 0.67 3.66 16 14 O -0.59 -7.64 15.71 -4.42 -0.07 -7.71 16 15 C -0.34 -1.30 6.17 -19.90 -0.12 -1.42 16 16 C 0.15 0.91 6.76 39.50 0.27 1.18 16 17 C -0.11 -0.50 9.35 22.30 0.21 -0.29 16 18 C -0.02 -0.02 4.53 -19.82 -0.09 -0.11 16 19 C -0.09 0.22 2.80 71.24 0.20 0.42 16 20 O -0.55 0.44 12.76 -148.98 -1.90 -1.46 16 21 Si 0.76 -3.61 31.97 68.60 2.19 -1.42 16 22 C -0.15 0.20 8.67 22.03 0.19 0.39 16 23 C 0.11 -0.09 11.18 83.30 0.93 0.84 16 24 N -0.27 -1.16 3.86 -187.28 -0.72 -1.88 16 25 N -0.34 -1.31 12.58 -56.62 -0.71 -2.02 16 26 C 0.13 -0.16 11.44 85.42 0.98 0.81 16 27 C -0.11 0.11 6.80 31.12 0.21 0.32 16 28 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 29 H 0.10 -0.61 8.14 -2.38 -0.02 -0.63 16 30 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 31 H 0.07 0.13 8.13 -2.38 -0.02 0.11 16 32 H 0.07 0.11 8.13 -2.39 -0.02 0.09 16 33 H 0.09 -0.44 8.01 -2.39 -0.02 -0.46 16 34 H 0.11 -1.17 8.14 -2.39 -0.02 -1.18 16 35 H 0.39 -5.00 7.72 -74.05 -0.57 -5.58 16 36 H 0.07 0.14 8.14 -2.39 -0.02 0.12 16 37 H 0.08 0.05 8.09 -2.39 -0.02 0.03 16 38 H 0.41 -4.59 6.34 -92.71 -0.59 -5.18 16 39 H 0.16 0.86 7.01 -2.91 -0.02 0.83 16 40 H 0.09 -0.44 7.71 -2.39 -0.02 -0.46 16 41 H 0.40 -3.45 8.74 -74.06 -0.65 -4.10 16 42 H -0.28 0.17 7.11 99.48 0.71 0.88 16 43 H -0.27 0.09 7.07 99.48 0.70 0.79 16 44 H 0.18 -0.86 7.52 -2.91 -0.02 -0.88 16 45 H 0.20 -1.43 8.06 -2.91 -0.02 -1.45 16 46 H 0.24 -2.93 7.46 -2.91 -0.02 -2.95 16 47 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 48 H 0.10 0.13 7.40 -2.38 -0.02 0.11 16 Total: 0.00 -30.27 410.25 -0.83 -31.10 By element: Atomic # 1 Polarization: -20.42 SS G_CDS: -0.73 Total: -21.15 kcal Atomic # 6 Polarization: 5.36 SS G_CDS: 5.78 Total: 11.14 kcal Atomic # 7 Polarization: -0.07 SS G_CDS: -3.92 Total: -3.99 kcal Atomic # 8 Polarization: -11.53 SS G_CDS: -4.15 Total: -15.67 kcal Atomic # 14 Polarization: -3.61 SS G_CDS: 2.19 Total: -1.42 kcal Total: -30.27 -0.83 -31.10 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_11618758.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.804 kcal (2) G-P(sol) polarization free energy of solvation -30.267 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.071 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.831 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.098 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.902 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds