Wall clock time and date at job start Sun Mar 7 2021 07:01:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.45198 * 109.47357 * 2 1 4 4 C 1.34225 * 117.00204 * 179.97438 * 3 2 1 5 5 O 1.20822 * 120.00030 * 359.97438 * 4 3 2 6 6 C 1.50701 * 119.99863 * 179.97438 * 4 3 2 7 7 H 1.09001 * 112.85398 * 311.19736 * 6 4 3 8 8 C 1.53786 * 113.61418 * 82.50278 * 6 4 3 9 9 C 1.53780 * 87.08257 * 139.98058 * 8 6 4 10 10 O 1.42900 * 113.68871 * 89.12411 * 9 8 6 11 11 C 1.53000 * 113.61385 * 220.01947 * 9 8 6 12 12 N 1.46491 * 109.47005 * 282.49525 * 11 9 8 13 13 C 1.34780 * 119.99986 * 180.02562 * 12 11 9 14 14 O 1.21692 * 120.00012 * 359.97438 * 13 12 11 15 15 C 1.46681 * 120.00110 * 180.02562 * 13 12 11 16 16 C 1.37873 * 126.23356 * 179.97438 * 15 13 12 17 17 C 1.50695 * 126.45589 * 0.02753 * 16 15 13 18 18 C 1.39829 * 107.08553 * 179.97438 * 16 15 13 19 19 C 1.50703 * 126.06883 * 179.97438 * 18 16 15 20 20 O 1.42904 * 109.46743 * 30.01783 * 19 18 16 21 21 Si 1.86303 * 109.47302 * 150.01736 * 19 18 16 22 22 C 1.35455 * 107.86642 * 0.02562 * 18 16 15 23 23 C 1.50693 * 125.56526 * 179.72977 * 22 18 16 24 24 N 1.35538 * 108.86998 * 0.02562 * 22 18 16 25 25 C 1.53785 * 113.61465 * 179.97438 * 6 4 3 26 26 H 1.08996 * 109.47417 * 299.99846 * 1 2 3 27 27 H 1.09003 * 109.47443 * 60.00274 * 1 2 3 28 28 H 1.09003 * 109.47272 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.47091 * 239.99529 * 2 1 3 30 30 H 1.09008 * 109.47017 * 119.99874 * 2 1 3 31 31 H 1.08997 * 113.61439 * 25.42845 * 8 6 4 32 32 H 1.09004 * 113.61287 * 254.52820 * 8 6 4 33 33 H 0.96696 * 113.99960 * 80.94322 * 10 9 8 34 34 H 1.09003 * 109.46934 * 162.49365 * 11 9 8 35 35 H 1.08995 * 109.47056 * 42.49937 * 11 9 8 36 36 H 0.97000 * 120.00424 * 359.97438 * 12 11 9 37 37 H 1.09002 * 109.46902 * 269.97067 * 17 16 15 38 38 H 1.08998 * 109.47694 * 29.97103 * 17 16 15 39 39 H 1.09001 * 109.47435 * 149.97291 * 17 16 15 40 40 H 1.09002 * 109.47139 * 270.01920 * 19 18 16 41 41 H 0.96706 * 113.99561 * 60.00573 * 20 19 18 42 42 H 1.48495 * 110.00047 * 180.02562 * 21 19 18 43 43 H 1.48502 * 110.00021 * 301.32361 * 21 19 18 44 44 H 1.08999 * 109.47203 * 90.00246 * 23 22 18 45 45 H 1.08997 * 109.47426 * 210.00158 * 23 22 18 46 46 H 1.09000 * 109.47537 * 330.00392 * 23 22 18 47 47 H 0.97000 * 125.67574 * 179.97438 * 24 22 18 48 48 H 1.08992 * 113.61072 * 105.47195 * 25 6 4 49 49 H 1.08994 * 113.61268 * 334.56630 * 25 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5866 0.0015 6 6 3.9207 2.9374 0.0000 7 1 3.4715 3.5810 -0.7564 8 6 3.9856 3.5777 1.3967 9 6 5.3559 4.1431 0.9876 10 8 5.2833 5.4204 0.3512 11 6 6.3975 4.0954 2.1073 12 7 6.1445 5.1825 3.0561 13 6 6.9425 5.3381 4.1311 14 8 7.8730 4.5754 4.3137 15 6 6.6889 6.4263 5.0815 16 6 7.4190 6.7025 6.2179 17 6 8.6238 5.9454 6.7142 18 6 6.8317 7.8181 6.8225 19 6 7.2909 8.4823 8.0950 20 8 8.7040 8.3207 8.2334 21 14 6.8765 10.2976 8.0325 22 6 5.7761 8.1953 6.0621 23 6 4.8565 9.3535 6.3518 24 7 5.6779 7.3570 5.0016 25 6 5.4582 2.9681 0.0013 26 1 -0.3634 0.5138 0.8899 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 1.8933 -0.5139 -0.8900 30 1 1.8933 -0.5139 0.8901 31 1 4.0372 2.8516 2.2079 32 1 3.2284 4.3444 1.5611 33 1 5.1954 6.1617 0.9659 34 1 7.3943 4.2096 1.6813 35 1 6.3311 3.1385 2.6249 36 1 5.4031 5.7908 2.9104 37 1 8.3009 5.1441 7.3788 38 1 9.1604 5.5200 5.8661 39 1 9.2816 6.6245 7.2567 40 1 6.7876 8.0238 8.9462 41 1 9.2166 8.7058 7.5095 42 1 7.3248 10.9641 9.2815 43 1 7.5310 10.9279 6.8579 44 1 5.2475 10.2548 5.8797 45 1 3.8642 9.1374 5.9562 46 1 4.7928 9.5062 7.4292 47 1 5.0073 7.4054 4.3024 48 1 5.8902 3.2424 -0.9610 49 1 5.9123 2.0754 0.4313 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_12297754.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:01:49 Heat of formation + Delta-G solvation = -131.414815 kcal Electronic energy + Delta-G solvation = -31699.534676 eV Core-core repulsion = 27209.095946 eV Total energy + Delta-G solvation = -4490.438730 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.176 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.74808 -42.13676 -40.81497 -39.82361 -37.87164 -37.68431 -36.12089 -35.56768 -33.69968 -33.21777 -32.74448 -30.08787 -29.36133 -27.55445 -27.13410 -26.55481 -25.68745 -23.85789 -22.53967 -21.99160 -20.94625 -20.84178 -20.55905 -19.66521 -18.79556 -18.03943 -17.74414 -17.49042 -17.39859 -17.00223 -16.90111 -16.54980 -16.34489 -16.11835 -15.71766 -15.37983 -15.11563 -14.97043 -14.71423 -14.48830 -14.35011 -14.28117 -14.07469 -14.00977 -13.90308 -13.72168 -13.67046 -13.33439 -13.26345 -13.20857 -13.02300 -12.85290 -12.66920 -12.51993 -12.42826 -12.28604 -11.84142 -11.79293 -11.55841 -11.50463 -11.13418 -11.05046 -10.48356 -10.38042 -9.54288 -9.03708 -4.83767 0.34659 1.11931 1.18501 1.57562 1.63570 1.65733 1.81595 1.90609 2.06673 2.31620 2.59206 2.94762 3.19527 3.27100 3.31805 3.39863 3.58711 3.71604 3.80977 3.90684 3.93350 3.96000 3.98068 4.01797 4.20743 4.25073 4.27327 4.36822 4.39455 4.40749 4.56136 4.61741 4.64708 4.68053 4.68430 4.71043 4.75382 4.76669 4.89548 4.93523 4.97449 5.04976 5.12964 5.37452 5.42704 5.44436 5.65896 5.89595 6.14947 6.21245 6.31429 6.53380 6.70931 7.05151 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.470 3.530 5 O -0.504 6.504 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.145 4.145 9 C 0.096 3.904 10 O -0.529 6.529 11 C 0.106 3.894 12 N -0.736 5.736 13 C 0.594 3.406 14 O -0.516 6.516 15 C -0.069 4.069 16 C -0.038 4.038 17 C -0.102 4.102 18 C -0.210 4.210 19 C -0.034 4.034 20 O -0.527 6.527 21 Si 0.654 3.346 22 C 0.068 3.932 23 C -0.104 4.104 24 N -0.535 5.535 25 C -0.100 4.100 26 H 0.067 0.933 27 H 0.067 0.933 28 H 0.082 0.918 29 H 0.071 0.929 30 H 0.071 0.929 31 H 0.099 0.901 32 H 0.090 0.910 33 H 0.376 0.624 34 H 0.085 0.915 35 H 0.086 0.914 36 H 0.389 0.611 37 H 0.067 0.933 38 H 0.075 0.925 39 H 0.082 0.918 40 H 0.112 0.888 41 H 0.375 0.625 42 H -0.255 1.255 43 H -0.261 1.261 44 H 0.088 0.912 45 H 0.087 0.913 46 H 0.102 0.898 47 H 0.415 0.585 48 H 0.095 0.905 49 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.078 4.397 -1.099 9.263 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.391 6.391 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.183 4.183 9 C 0.055 3.945 10 O -0.334 6.334 11 C -0.018 4.018 12 N -0.390 5.390 13 C 0.382 3.618 14 O -0.391 6.391 15 C -0.180 4.180 16 C -0.046 4.046 17 C -0.158 4.158 18 C -0.217 4.217 19 C -0.145 4.145 20 O -0.334 6.334 21 Si 0.555 3.445 22 C -0.050 4.050 23 C -0.159 4.159 24 N -0.133 5.133 25 C -0.137 4.137 26 H 0.086 0.914 27 H 0.087 0.913 28 H 0.100 0.900 29 H 0.090 0.910 30 H 0.089 0.911 31 H 0.117 0.883 32 H 0.108 0.892 33 H 0.224 0.776 34 H 0.103 0.897 35 H 0.105 0.895 36 H 0.223 0.777 37 H 0.085 0.915 38 H 0.094 0.906 39 H 0.100 0.900 40 H 0.130 0.870 41 H 0.222 0.778 42 H -0.180 1.180 43 H -0.185 1.185 44 H 0.107 0.893 45 H 0.106 0.894 46 H 0.120 0.880 47 H 0.252 0.748 48 H 0.113 0.887 49 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -7.096 3.601 -1.110 8.034 hybrid contribution 0.172 0.089 -0.528 0.563 sum -6.924 3.690 -1.638 8.015 Atomic orbital electron populations 1.21821 0.92295 1.03306 1.03638 1.23100 0.95639 0.79816 1.02802 1.86512 1.24341 1.32803 1.83668 1.23503 0.80727 0.92276 0.72218 1.90692 1.60509 1.42890 1.45005 1.22413 0.97298 0.91095 1.01288 0.85014 1.23667 0.98136 1.01020 0.95488 1.22386 0.93697 0.85481 0.92967 1.86615 1.96056 1.14449 1.36310 1.21947 0.99679 0.91229 0.88911 1.45754 1.33323 1.33717 1.26159 1.16978 0.81975 0.83155 0.79689 1.90869 1.29771 1.44072 1.74404 1.20038 0.97467 0.98195 1.02344 1.19813 0.97244 0.95136 0.92417 1.20577 0.94242 0.99380 1.01637 1.19559 1.00281 1.01168 1.00689 1.24259 0.83567 1.10275 0.96376 1.86558 1.16218 1.80346 1.50233 0.95587 0.93566 0.74857 0.80525 1.20164 0.99506 0.95708 0.89634 1.20425 0.98031 0.94167 1.03312 1.41712 1.25428 1.24264 1.21854 1.23043 0.93241 0.96570 1.00884 0.91395 0.91348 0.89961 0.91029 0.91087 0.88275 0.89188 0.77611 0.89696 0.89543 0.77719 0.91481 0.90586 0.89950 0.86981 0.77768 1.17989 1.18515 0.89337 0.89397 0.87994 0.74792 0.88661 0.86628 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.28 10.29 37.16 0.38 0.67 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.49 10.22 -39.24 -0.40 -0.89 16 4 C 0.47 0.76 7.48 36.01 0.27 1.03 16 5 O -0.50 -2.24 15.65 -18.75 -0.29 -2.54 16 6 C -0.10 0.12 4.20 -90.95 -0.38 -0.26 16 7 H 0.13 -0.27 8.14 -51.93 -0.42 -0.69 16 8 C -0.15 0.42 7.02 -25.92 -0.18 0.24 16 9 C 0.10 -0.25 1.41 -89.83 -0.13 -0.37 16 10 O -0.53 1.36 13.41 -35.23 -0.47 0.89 16 11 C 0.11 -0.15 5.26 -4.05 -0.02 -0.17 16 12 N -0.74 1.58 5.33 -61.62 -0.33 1.25 16 13 C 0.59 1.02 7.79 -12.85 -0.10 0.92 16 14 O -0.52 -2.92 14.80 5.20 0.08 -2.84 16 15 C -0.07 -0.06 7.06 -81.98 -0.58 -0.64 16 16 C -0.04 -0.09 6.15 -104.16 -0.64 -0.73 16 17 C -0.10 -0.31 9.51 36.00 0.34 0.03 16 18 C -0.21 -0.08 5.38 -105.02 -0.56 -0.65 16 19 C -0.03 0.00 3.03 36.01 0.11 0.11 16 20 O -0.53 -0.86 10.20 -35.23 -0.36 -1.22 16 21 Si 0.65 -0.83 26.77 -169.99 -4.55 -5.38 16 22 C 0.07 -0.14 6.84 -81.95 -0.56 -0.71 16 23 C -0.10 0.59 8.21 36.00 0.30 0.88 16 24 N -0.54 1.46 5.99 -5.70 -0.03 1.43 16 25 C -0.10 0.12 6.79 -25.93 -0.18 -0.06 16 26 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 27 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 29 H 0.07 0.02 8.13 -51.93 -0.42 -0.41 16 30 H 0.07 0.01 8.13 -51.92 -0.42 -0.41 16 31 H 0.10 -0.24 7.99 -51.93 -0.41 -0.65 16 32 H 0.09 -0.39 8.14 -51.93 -0.42 -0.81 16 33 H 0.38 -2.27 7.62 45.56 0.35 -1.92 16 34 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 35 H 0.09 -0.05 8.05 -51.93 -0.42 -0.46 16 36 H 0.39 -2.16 6.45 -40.82 -0.26 -2.42 16 37 H 0.07 0.24 8.14 -51.93 -0.42 -0.19 16 38 H 0.08 0.33 6.48 -51.93 -0.34 0.00 16 39 H 0.08 0.20 5.48 -51.93 -0.28 -0.09 16 40 H 0.11 -0.05 7.96 -51.93 -0.41 -0.46 16 41 H 0.37 -0.25 8.48 45.56 0.39 0.14 16 42 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 43 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 44 H 0.09 -0.54 7.12 -51.93 -0.37 -0.91 16 45 H 0.09 -0.66 8.14 -51.93 -0.42 -1.08 16 46 H 0.10 -0.69 5.21 -51.93 -0.27 -0.96 16 47 H 0.41 -2.65 8.19 -40.82 -0.33 -2.98 16 48 H 0.09 -0.10 8.14 -51.93 -0.42 -0.53 16 49 H 0.12 -0.06 7.39 -51.93 -0.38 -0.44 16 LS Contribution 395.16 15.07 5.95 5.95 Total: 0.00 -11.70 395.16 -8.71 -20.41 By element: Atomic # 1 Polarization: -10.99 SS G_CDS: -6.60 Total: -17.59 kcal Atomic # 6 Polarization: 2.23 SS G_CDS: -1.70 Total: 0.53 kcal Atomic # 7 Polarization: 3.04 SS G_CDS: -0.36 Total: 2.68 kcal Atomic # 8 Polarization: -5.15 SS G_CDS: -1.45 Total: -6.60 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -4.55 Total: -5.38 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -11.70 -8.71 -20.41 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_12297754.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.006 kcal (2) G-P(sol) polarization free energy of solvation -11.696 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.702 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.713 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.409 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.415 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds