Wall clock time and date at job start Sun Mar 7 2021 07:01:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.45198 * 109.47357 * 2 1 4 4 C 1.34225 * 117.00204 * 179.97438 * 3 2 1 5 5 O 1.20822 * 120.00030 * 359.97438 * 4 3 2 6 6 C 1.50701 * 119.99863 * 179.97438 * 4 3 2 7 7 H 1.09001 * 112.85398 * 311.19736 * 6 4 3 8 8 C 1.53786 * 113.61418 * 82.50278 * 6 4 3 9 9 C 1.53780 * 87.08257 * 139.98058 * 8 6 4 10 10 O 1.42900 * 113.68871 * 89.12411 * 9 8 6 11 11 C 1.53000 * 113.61385 * 220.01947 * 9 8 6 12 12 N 1.46491 * 109.47005 * 282.49525 * 11 9 8 13 13 C 1.34780 * 119.99986 * 180.02562 * 12 11 9 14 14 O 1.21692 * 120.00012 * 359.97438 * 13 12 11 15 15 C 1.46681 * 120.00110 * 180.02562 * 13 12 11 16 16 C 1.37873 * 126.23356 * 179.97438 * 15 13 12 17 17 C 1.50695 * 126.45589 * 0.02753 * 16 15 13 18 18 C 1.39829 * 107.08553 * 179.97438 * 16 15 13 19 19 C 1.50703 * 126.06883 * 179.97438 * 18 16 15 20 20 O 1.42904 * 109.46743 * 30.01783 * 19 18 16 21 21 Si 1.86303 * 109.47302 * 150.01736 * 19 18 16 22 22 C 1.35455 * 107.86642 * 0.02562 * 18 16 15 23 23 C 1.50693 * 125.56526 * 179.72977 * 22 18 16 24 24 N 1.35538 * 108.86998 * 0.02562 * 22 18 16 25 25 C 1.53785 * 113.61465 * 179.97438 * 6 4 3 26 26 H 1.08996 * 109.47417 * 299.99846 * 1 2 3 27 27 H 1.09003 * 109.47443 * 60.00274 * 1 2 3 28 28 H 1.09003 * 109.47272 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.47091 * 239.99529 * 2 1 3 30 30 H 1.09008 * 109.47017 * 119.99874 * 2 1 3 31 31 H 1.08997 * 113.61439 * 25.42845 * 8 6 4 32 32 H 1.09004 * 113.61287 * 254.52820 * 8 6 4 33 33 H 0.96696 * 113.99960 * 80.94322 * 10 9 8 34 34 H 1.09003 * 109.46934 * 162.49365 * 11 9 8 35 35 H 1.08995 * 109.47056 * 42.49937 * 11 9 8 36 36 H 0.97000 * 120.00424 * 359.97438 * 12 11 9 37 37 H 1.09002 * 109.46902 * 269.97067 * 17 16 15 38 38 H 1.08998 * 109.47694 * 29.97103 * 17 16 15 39 39 H 1.09001 * 109.47435 * 149.97291 * 17 16 15 40 40 H 1.09002 * 109.47139 * 270.01920 * 19 18 16 41 41 H 0.96706 * 113.99561 * 60.00573 * 20 19 18 42 42 H 1.48495 * 110.00047 * 180.02562 * 21 19 18 43 43 H 1.48502 * 110.00021 * 301.32361 * 21 19 18 44 44 H 1.08999 * 109.47203 * 90.00246 * 23 22 18 45 45 H 1.08997 * 109.47426 * 210.00158 * 23 22 18 46 46 H 1.09000 * 109.47537 * 330.00392 * 23 22 18 47 47 H 0.97000 * 125.67574 * 179.97438 * 24 22 18 48 48 H 1.08992 * 113.61072 * 105.47195 * 25 6 4 49 49 H 1.08994 * 113.61268 * 334.56630 * 25 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5866 0.0015 6 6 3.9207 2.9374 0.0000 7 1 3.4715 3.5810 -0.7564 8 6 3.9856 3.5777 1.3967 9 6 5.3559 4.1431 0.9876 10 8 5.2833 5.4204 0.3512 11 6 6.3975 4.0954 2.1073 12 7 6.1445 5.1825 3.0561 13 6 6.9425 5.3381 4.1311 14 8 7.8730 4.5754 4.3137 15 6 6.6889 6.4263 5.0815 16 6 7.4190 6.7025 6.2179 17 6 8.6238 5.9454 6.7142 18 6 6.8317 7.8181 6.8225 19 6 7.2909 8.4823 8.0950 20 8 8.7040 8.3207 8.2334 21 14 6.8765 10.2976 8.0325 22 6 5.7761 8.1953 6.0621 23 6 4.8565 9.3535 6.3518 24 7 5.6779 7.3570 5.0016 25 6 5.4582 2.9681 0.0013 26 1 -0.3634 0.5138 0.8899 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 1.8933 -0.5139 -0.8900 30 1 1.8933 -0.5139 0.8901 31 1 4.0372 2.8516 2.2079 32 1 3.2284 4.3444 1.5611 33 1 5.1954 6.1617 0.9659 34 1 7.3943 4.2096 1.6813 35 1 6.3311 3.1385 2.6249 36 1 5.4031 5.7908 2.9104 37 1 8.3009 5.1441 7.3788 38 1 9.1604 5.5200 5.8661 39 1 9.2816 6.6245 7.2567 40 1 6.7876 8.0238 8.9462 41 1 9.2166 8.7058 7.5095 42 1 7.3248 10.9641 9.2815 43 1 7.5310 10.9279 6.8579 44 1 5.2475 10.2548 5.8797 45 1 3.8642 9.1374 5.9562 46 1 4.7928 9.5062 7.4292 47 1 5.0073 7.4054 4.3024 48 1 5.8902 3.2424 -0.9610 49 1 5.9123 2.0754 0.4313 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_12297754.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:01:48 Heat of formation + Delta-G solvation = -137.476583 kcal Electronic energy + Delta-G solvation = -31699.797534 eV Core-core repulsion = 27209.095946 eV Total energy + Delta-G solvation = -4490.701588 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.176 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.69753 -42.13902 -40.84148 -39.88162 -37.91374 -37.79706 -36.07383 -35.53016 -33.65681 -33.12129 -32.69168 -30.02985 -29.29398 -27.52790 -26.99834 -26.56471 -25.64208 -23.80100 -22.54612 -21.99164 -20.87399 -20.77303 -20.54961 -19.61377 -18.86071 -18.01319 -17.79929 -17.43413 -17.41033 -17.03025 -16.88093 -16.45963 -16.28249 -16.06803 -15.70355 -15.33710 -15.07820 -14.93803 -14.72148 -14.43194 -14.33398 -14.22465 -13.96911 -13.89959 -13.80124 -13.70277 -13.54841 -13.30946 -13.26081 -13.10197 -13.00172 -12.80494 -12.59331 -12.55665 -12.32218 -12.32057 -11.81625 -11.78953 -11.60219 -11.51816 -11.23052 -10.96737 -10.52645 -10.40653 -9.54380 -8.96930 -4.76042 0.33558 1.01667 1.24011 1.57089 1.67837 1.71194 1.84209 2.07034 2.11597 2.23000 2.80452 3.06428 3.31697 3.38759 3.42625 3.43992 3.80766 3.85286 3.87290 3.93574 3.98404 4.01157 4.16505 4.22779 4.27336 4.28745 4.52431 4.54613 4.59837 4.64650 4.67605 4.69250 4.77271 4.81535 4.82422 4.82767 4.86293 4.87183 4.90102 5.05249 5.08833 5.10952 5.16650 5.27820 5.33121 5.39241 5.69018 5.81772 6.28702 6.50992 6.57697 6.60079 6.60884 7.01786 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.100 4.100 7 H 0.147 0.853 8 C -0.135 4.135 9 C 0.116 3.884 10 O -0.536 6.536 11 C 0.109 3.891 12 N -0.714 5.714 13 C 0.590 3.410 14 O -0.566 6.566 15 C -0.082 4.082 16 C -0.070 4.070 17 C -0.095 4.095 18 C -0.233 4.233 19 C -0.053 4.053 20 O -0.550 6.550 21 Si 0.762 3.238 22 C 0.090 3.910 23 C -0.111 4.111 24 N -0.514 5.514 25 C -0.109 4.109 26 H 0.070 0.930 27 H 0.069 0.931 28 H 0.095 0.905 29 H 0.066 0.934 30 H 0.067 0.933 31 H 0.093 0.907 32 H 0.116 0.884 33 H 0.392 0.608 34 H 0.069 0.931 35 H 0.075 0.925 36 H 0.409 0.591 37 H 0.053 0.947 38 H 0.056 0.944 39 H 0.084 0.916 40 H 0.113 0.887 41 H 0.381 0.619 42 H -0.307 1.307 43 H -0.291 1.291 44 H 0.102 0.898 45 H 0.120 0.880 46 H 0.117 0.883 47 H 0.435 0.565 48 H 0.093 0.907 49 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.017 6.557 -1.658 12.928 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.275 6.275 4 C 0.313 3.687 5 O -0.429 6.429 6 C -0.119 4.119 7 H 0.164 0.836 8 C -0.172 4.172 9 C 0.074 3.926 10 O -0.344 6.344 11 C -0.015 4.015 12 N -0.368 5.368 13 C 0.379 3.621 14 O -0.445 6.445 15 C -0.193 4.193 16 C -0.079 4.079 17 C -0.152 4.152 18 C -0.239 4.239 19 C -0.161 4.161 20 O -0.357 6.357 21 Si 0.667 3.333 22 C -0.030 4.030 23 C -0.166 4.166 24 N -0.113 5.113 25 C -0.147 4.147 26 H 0.089 0.911 27 H 0.088 0.912 28 H 0.114 0.886 29 H 0.085 0.915 30 H 0.085 0.915 31 H 0.112 0.888 32 H 0.134 0.866 33 H 0.243 0.757 34 H 0.088 0.912 35 H 0.094 0.906 36 H 0.246 0.754 37 H 0.071 0.929 38 H 0.074 0.926 39 H 0.102 0.898 40 H 0.131 0.869 41 H 0.230 0.770 42 H -0.236 1.236 43 H -0.218 1.218 44 H 0.121 0.879 45 H 0.138 0.862 46 H 0.134 0.866 47 H 0.276 0.724 48 H 0.112 0.888 49 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -10.115 5.768 -1.716 11.770 hybrid contribution 1.098 -0.580 -0.353 1.291 sum -9.017 5.188 -2.070 10.607 Atomic orbital electron populations 1.21823 0.90561 1.04277 1.03818 1.23262 0.97029 0.79393 1.02416 1.86522 1.24217 1.33425 1.83374 1.24094 0.80567 0.93005 0.70991 1.90676 1.61198 1.44279 1.46797 1.22532 0.96788 0.89665 1.02880 0.83569 1.23648 0.98264 1.01176 0.94155 1.22061 0.93421 0.85426 0.91718 1.86597 1.95997 1.14724 1.37106 1.21860 0.99516 0.90935 0.89186 1.45490 1.33038 1.33504 1.24727 1.17183 0.81651 0.82884 0.80336 1.90845 1.32030 1.45946 1.75697 1.19798 0.98632 0.98909 1.02001 1.19922 0.97635 0.96397 0.93908 1.20426 0.95073 0.99130 1.00557 1.19640 1.01606 1.01251 1.01446 1.24655 0.82746 1.12150 0.96574 1.86518 1.17443 1.80909 1.50846 0.94482 0.91865 0.71059 0.75874 1.20695 0.98455 0.95589 0.88272 1.20724 0.98690 0.92747 1.04475 1.41638 1.24678 1.22853 1.22154 1.23062 0.93529 0.96916 1.01183 0.91092 0.91197 0.88626 0.91543 0.91464 0.88817 0.86593 0.75673 0.91242 0.90638 0.75367 0.92859 0.92551 0.89787 0.86932 0.77017 1.23584 1.21775 0.87944 0.86214 0.86590 0.72350 0.88839 0.87918 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.61 10.29 71.98 0.74 1.35 16 2 C 0.05 0.04 6.19 71.98 0.45 0.49 16 3 O -0.36 -1.03 10.22 -51.37 -0.52 -1.55 16 4 C 0.47 1.81 7.48 71.24 0.53 2.34 16 5 O -0.54 -5.70 15.65 21.98 0.34 -5.36 16 6 C -0.10 0.28 4.20 -11.01 -0.05 0.24 16 7 H 0.15 -0.81 8.14 -2.39 -0.02 -0.83 16 8 C -0.13 0.96 7.02 31.12 0.22 1.17 16 9 C 0.12 -0.66 1.41 -10.28 -0.01 -0.68 16 10 O -0.54 3.75 13.41 -148.98 -2.00 1.75 16 11 C 0.11 -0.23 5.26 86.38 0.45 0.22 16 12 N -0.71 3.28 5.33 -467.09 -2.49 0.79 16 13 C 0.59 2.64 7.79 86.45 0.67 3.32 16 14 O -0.57 -7.98 14.80 -4.32 -0.06 -8.04 16 15 C -0.08 -0.16 7.06 40.35 0.28 0.12 16 16 C -0.07 -0.42 6.15 -19.57 -0.12 -0.54 16 17 C -0.09 -0.89 9.51 71.23 0.68 -0.21 16 18 C -0.23 -0.16 5.38 -20.12 -0.11 -0.27 16 19 C -0.05 -0.02 3.03 71.24 0.22 0.19 16 20 O -0.55 -2.65 10.20 -148.98 -1.52 -4.17 16 21 Si 0.76 -2.48 26.77 68.60 1.84 -0.64 16 22 C 0.09 -0.57 6.84 41.34 0.28 -0.29 16 23 C -0.11 1.68 8.21 71.23 0.59 2.26 16 24 N -0.51 3.83 5.99 -171.93 -1.03 2.80 16 25 C -0.11 0.19 6.79 31.11 0.21 0.40 16 26 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 27 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 28 H 0.10 -0.65 8.14 -2.39 -0.02 -0.67 16 29 H 0.07 0.10 8.13 -2.39 -0.02 0.08 16 30 H 0.07 0.09 8.13 -2.38 -0.02 0.07 16 31 H 0.09 -0.50 7.99 -2.39 -0.02 -0.51 16 32 H 0.12 -1.37 8.14 -2.38 -0.02 -1.39 16 33 H 0.39 -5.82 7.62 -74.06 -0.56 -6.38 16 34 H 0.07 0.11 8.14 -2.39 -0.02 0.09 16 35 H 0.08 0.05 8.05 -2.39 -0.02 0.03 16 36 H 0.41 -5.36 6.45 -92.71 -0.60 -5.95 16 37 H 0.05 0.57 8.14 -2.39 -0.02 0.55 16 38 H 0.06 0.72 6.48 -2.39 -0.02 0.70 16 39 H 0.08 0.66 5.48 -2.39 -0.01 0.65 16 40 H 0.11 -0.05 7.96 -2.39 -0.02 -0.07 16 41 H 0.38 0.17 8.48 -74.05 -0.63 -0.46 16 42 H -0.31 -1.66 7.11 99.48 0.71 -0.95 16 43 H -0.29 -0.50 7.11 99.48 0.71 0.21 16 44 H 0.10 -1.68 7.12 -2.39 -0.02 -1.70 16 45 H 0.12 -2.44 8.14 -2.39 -0.02 -2.45 16 46 H 0.12 -1.99 5.21 -2.39 -0.01 -2.00 16 47 H 0.43 -7.02 8.19 -92.71 -0.76 -7.78 16 48 H 0.09 -0.14 8.14 -2.39 -0.02 -0.16 16 49 H 0.10 0.10 7.39 -2.39 -0.02 0.08 16 Total: 0.00 -31.90 395.16 -1.89 -33.80 By element: Atomic # 1 Polarization: -28.01 SS G_CDS: -1.48 Total: -29.49 kcal Atomic # 6 Polarization: 5.09 SS G_CDS: 5.03 Total: 10.12 kcal Atomic # 7 Polarization: 7.11 SS G_CDS: -3.52 Total: 3.59 kcal Atomic # 8 Polarization: -13.61 SS G_CDS: -3.76 Total: -17.37 kcal Atomic # 14 Polarization: -2.48 SS G_CDS: 1.84 Total: -0.64 kcal Total: -31.90 -1.89 -33.80 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_12297754.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.678 kcal (2) G-P(sol) polarization free energy of solvation -31.904 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.582 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.895 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.799 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.477 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds