Wall clock time and date at job start Sun Mar 7 2021 07:01:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 O 1.45201 * 109.46605 * 2 1 4 4 C 1.34231 * 116.99417 * 180.02562 * 3 2 1 5 5 O 1.20828 * 120.00392 * 0.02562 * 4 3 2 6 6 C 1.50698 * 119.99620 * 180.02562 * 4 3 2 7 7 H 1.09003 * 112.85420 * 48.80407 * 6 4 3 8 8 C 1.53791 * 113.61519 * 180.02562 * 6 4 3 9 9 C 1.53782 * 87.07972 * 139.97845 * 8 6 4 10 10 O 1.42903 * 113.61273 * 89.20400 * 9 8 6 11 11 C 1.53000 * 113.61027 * 220.01623 * 9 8 6 12 12 N 1.46499 * 109.46840 * 178.47186 * 11 9 8 13 13 C 1.34779 * 119.99872 * 180.02562 * 12 11 9 14 14 O 1.21618 * 120.00191 * 0.02562 * 13 12 11 15 15 C 1.47300 * 119.99910 * 180.02562 * 13 12 11 16 16 C 1.40297 * 120.13668 * 179.72564 * 15 13 12 17 17 O 1.35657 * 120.11620 * 0.02562 * 16 15 13 18 18 C 1.42905 * 116.99816 * 180.02562 * 17 16 15 19 19 C 1.38447 * 119.76256 * 179.72022 * 16 15 13 20 20 C 1.38682 * 120.02740 * 0.57397 * 19 16 15 21 21 O 1.35716 * 119.86167 * 179.71635 * 20 19 16 22 22 C 1.42900 * 116.99741 * 359.97438 * 21 20 19 23 23 C 1.39183 * 120.27749 * 359.70366 * 20 19 16 24 24 C 1.50700 * 119.88290 * 180.02562 * 23 20 19 25 25 O 1.42893 * 109.47472 * 74.97009 * 24 23 20 26 26 Si 1.86301 * 109.47003 * 194.97327 * 24 23 20 27 27 C 1.37546 * 120.24036 * 359.97438 * 23 20 19 28 28 C 1.53773 * 87.17391 * 334.61028 * 9 8 6 29 29 H 1.08995 * 109.47129 * 59.99868 * 1 2 3 30 30 H 1.09003 * 109.46891 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.46641 * 299.99310 * 1 2 3 32 32 H 1.08998 * 109.46641 * 240.00690 * 2 1 3 33 33 H 1.08996 * 109.47230 * 120.00671 * 2 1 3 34 34 H 1.08997 * 113.61334 * 25.42862 * 8 6 4 35 35 H 1.09004 * 113.68776 * 254.53766 * 8 6 4 36 36 H 0.96697 * 113.99506 * 181.52404 * 10 9 8 37 37 H 1.09002 * 109.47398 * 298.47512 * 11 9 8 38 38 H 1.09001 * 109.47194 * 58.47693 * 11 9 8 39 39 H 0.97000 * 120.00420 * 0.02562 * 12 11 9 40 40 H 1.09004 * 109.46968 * 299.99808 * 18 17 16 41 41 H 1.08991 * 109.46998 * 59.99915 * 18 17 16 42 42 H 1.09003 * 109.47114 * 180.02562 * 18 17 16 43 43 H 1.08001 * 119.98411 * 180.29378 * 19 16 15 44 44 H 1.09005 * 109.47082 * 179.97438 * 22 21 20 45 45 H 1.09001 * 109.47321 * 299.99247 * 22 21 20 46 46 H 1.08994 * 109.47403 * 60.00275 * 22 21 20 47 47 H 1.09005 * 109.46900 * 314.96892 * 24 23 20 48 48 H 0.96700 * 113.99991 * 300.00472 * 25 24 23 49 49 H 1.48500 * 110.00058 * 59.99725 * 26 24 23 50 50 H 1.48507 * 109.99797 * 181.31742 * 26 24 23 51 51 H 1.07999 * 120.02251 * 180.02562 * 27 23 20 52 52 H 1.09008 * 113.61471 * 139.94504 * 28 9 8 53 53 H 1.08999 * 113.61361 * 270.83858 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0808 0.5867 -0.0015 6 6 3.9206 2.9375 0.0000 7 1 3.4714 3.5811 0.7564 8 6 5.4582 2.9682 -0.0013 9 6 5.3554 4.1433 -0.9880 10 8 5.2831 5.4207 -0.3514 11 6 6.3967 4.0959 -2.1080 12 7 6.1943 5.2314 -3.0113 13 6 7.0004 5.3952 -4.0789 14 8 7.8955 4.6002 -4.2928 15 6 6.7972 6.5372 -4.9868 16 6 7.6382 6.7138 -6.0958 17 8 8.6414 5.8329 -6.3363 18 6 9.4578 6.0767 -7.4836 19 6 7.4367 7.7866 -6.9473 20 6 6.4140 8.6891 -6.6965 21 8 6.2231 9.7428 -7.5303 22 6 7.1120 9.8589 -8.6431 23 6 5.5825 8.5186 -5.5935 24 6 4.4735 9.5044 -5.3297 25 8 3.4059 9.2786 -6.2522 26 14 3.8474 9.2836 -3.5890 27 6 5.7685 7.4531 -4.7439 28 6 3.9842 3.5805 -1.3974 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3632 0.5137 0.8901 32 1 1.8933 -0.5137 -0.8901 33 1 1.8934 -0.5139 0.8899 34 1 5.9124 2.0755 -0.4313 35 1 5.8916 3.2424 0.9606 36 1 5.1949 6.1619 -0.9660 37 1 7.3965 4.1481 -1.6771 38 1 6.2892 3.1651 -2.6649 39 1 5.4801 5.8653 -2.8410 40 1 8.8374 6.0660 -8.3799 41 1 9.9393 7.0497 -7.3867 42 1 10.2189 5.3002 -7.5597 43 1 8.0790 7.9233 -7.8048 44 1 6.8497 10.7412 -9.2271 45 1 8.1361 9.9532 -8.2818 46 1 7.0279 8.9709 -9.2695 47 1 4.8523 10.5190 -5.4536 48 1 3.6603 9.3768 -7.1799 49 1 4.9484 9.5158 -2.6199 50 1 2.7321 10.2284 -3.3267 51 1 5.1209 7.3240 -3.8893 52 1 3.2280 4.3485 -1.5605 53 1 4.0347 2.8555 -2.2097 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_12297780.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:01:53 Heat of formation + Delta-G solvation = -214.791893 kcal Electronic energy + Delta-G solvation = -38319.910439 eV Core-core repulsion = 33125.691594 eV Total energy + Delta-G solvation = -5194.218845 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.180 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.21355 -41.97587 -40.84695 -40.23400 -39.66705 -38.39103 -37.71055 -36.99786 -35.91520 -35.27721 -32.64864 -32.26132 -32.03369 -29.55446 -29.00224 -28.12478 -26.92248 -26.31844 -26.04380 -24.46781 -23.69508 -22.78663 -21.84747 -21.61220 -20.69565 -20.12818 -19.22952 -18.68488 -18.56573 -18.03644 -17.71830 -17.37256 -17.30533 -17.21543 -17.19179 -16.69721 -16.58660 -16.35390 -16.11448 -15.96772 -15.78232 -15.53717 -15.31570 -15.08408 -14.76331 -14.46937 -14.30694 -14.18027 -14.14316 -14.01478 -13.74594 -13.52592 -13.44210 -13.37990 -13.18041 -12.92993 -12.68764 -12.68541 -12.55390 -12.53666 -12.52348 -12.20410 -12.13390 -11.67737 -11.67366 -11.53590 -11.42149 -11.32759 -11.23440 -10.91876 -10.81554 -10.22431 -9.93917 -9.21193 -4.92882 -0.29753 0.07038 1.10292 1.40300 1.63873 1.65949 1.73882 2.00206 2.04690 2.05264 2.15745 2.58867 2.93440 3.19331 3.42169 3.42737 3.50211 3.53949 3.55946 3.70588 3.72282 3.95202 3.96738 3.99339 4.06938 4.08527 4.15765 4.21337 4.25603 4.26133 4.28374 4.29596 4.34345 4.35949 4.41600 4.62333 4.65898 4.67280 4.72217 4.74981 4.76563 4.84632 4.90016 4.91981 4.96477 4.98351 5.00302 5.15684 5.20252 5.25410 5.30684 5.46343 5.96743 6.23991 6.44117 6.62396 6.69143 6.72142 7.20414 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.541 6.541 6 C -0.101 4.101 7 H 0.147 0.853 8 C -0.108 4.108 9 C 0.113 3.887 10 O -0.537 6.537 11 C 0.109 3.891 12 N -0.716 5.716 13 C 0.566 3.434 14 O -0.562 6.562 15 C -0.224 4.224 16 C 0.215 3.785 17 O -0.304 6.304 18 C 0.010 3.990 19 C -0.307 4.307 20 C 0.204 3.796 21 O -0.318 6.318 22 C 0.013 3.987 23 C -0.198 4.198 24 C -0.080 4.080 25 O -0.547 6.547 26 Si 0.806 3.194 27 C 0.010 3.990 28 C -0.137 4.137 29 H 0.070 0.930 30 H 0.094 0.906 31 H 0.069 0.931 32 H 0.067 0.933 33 H 0.066 0.934 34 H 0.102 0.898 35 H 0.092 0.908 36 H 0.393 0.607 37 H 0.068 0.932 38 H 0.076 0.924 39 H 0.410 0.590 40 H 0.072 0.928 41 H 0.071 0.929 42 H 0.112 0.888 43 H 0.164 0.836 44 H 0.122 0.878 45 H 0.067 0.933 46 H 0.071 0.929 47 H 0.069 0.931 48 H 0.373 0.627 49 H -0.246 1.246 50 H -0.297 1.297 51 H 0.169 0.831 52 H 0.120 0.880 53 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.844 4.197 -3.669 6.258 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.275 6.275 4 C 0.314 3.686 5 O -0.431 6.431 6 C -0.120 4.120 7 H 0.165 0.835 8 C -0.146 4.146 9 C 0.071 3.929 10 O -0.345 6.345 11 C -0.015 4.015 12 N -0.371 5.371 13 C 0.355 3.645 14 O -0.441 6.441 15 C -0.228 4.228 16 C 0.165 3.835 17 O -0.215 6.215 18 C -0.084 4.084 19 C -0.327 4.327 20 C 0.157 3.843 21 O -0.230 6.230 22 C -0.081 4.081 23 C -0.199 4.199 24 C -0.186 4.186 25 O -0.353 6.353 26 Si 0.706 3.294 27 C -0.008 4.008 28 C -0.175 4.175 29 H 0.089 0.911 30 H 0.113 0.887 31 H 0.088 0.912 32 H 0.085 0.915 33 H 0.084 0.916 34 H 0.120 0.880 35 H 0.111 0.889 36 H 0.244 0.756 37 H 0.087 0.913 38 H 0.095 0.905 39 H 0.249 0.751 40 H 0.090 0.910 41 H 0.089 0.911 42 H 0.130 0.870 43 H 0.181 0.819 44 H 0.141 0.859 45 H 0.086 0.914 46 H 0.089 0.911 47 H 0.087 0.913 48 H 0.222 0.778 49 H -0.171 1.171 50 H -0.225 1.225 51 H 0.186 0.814 52 H 0.139 0.861 53 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -2.477 3.202 -1.886 4.466 hybrid contribution 1.071 1.209 -2.218 2.743 sum -1.407 4.411 -4.104 6.187 Atomic orbital electron populations 1.21822 0.90656 1.04200 1.03817 1.23245 0.96967 0.79497 1.02369 1.86531 1.24289 1.33298 1.83390 1.24129 0.80507 0.93050 0.70899 1.90671 1.61190 1.44315 1.46898 1.22580 0.96766 0.89554 1.03072 0.83541 1.23057 0.93485 0.96917 1.01114 1.22101 0.93574 0.85453 0.91734 1.86584 1.96010 1.14758 1.37167 1.21857 0.99653 0.89863 0.90086 1.45572 1.35195 1.29712 1.26626 1.17987 0.81231 0.84504 0.80751 1.90842 1.33557 1.45900 1.73810 1.19135 1.02688 1.01324 0.99669 1.19008 0.86083 0.87105 0.91268 1.86370 1.40673 1.47536 1.46932 1.23471 0.94559 1.04137 0.86231 1.21412 1.05814 0.99314 1.06134 1.18920 0.91140 0.85358 0.88907 1.86037 1.56179 1.42925 1.37856 1.23480 0.93541 1.04884 0.86190 1.19578 1.01640 1.01306 0.97405 1.25568 0.88782 0.96865 1.07416 1.86683 1.35016 1.93790 1.19800 0.92734 0.78015 0.88870 0.69755 1.20857 0.93212 0.89655 0.97041 1.23735 0.98400 1.01330 0.94029 0.91086 0.88703 0.91234 0.91462 0.91605 0.87969 0.88922 0.75554 0.91340 0.90528 0.75103 0.90956 0.91060 0.86970 0.81892 0.85944 0.91448 0.91061 0.91350 0.77841 1.17149 1.22502 0.81447 0.86130 0.88637 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.51 10.29 71.98 0.74 1.25 16 2 C 0.05 0.07 6.19 71.98 0.45 0.52 16 3 O -0.36 -1.28 10.22 -51.42 -0.53 -1.80 16 4 C 0.47 2.11 7.49 71.24 0.53 2.64 16 5 O -0.54 -5.98 15.65 21.96 0.34 -5.64 16 6 C -0.10 0.21 4.20 -10.95 -0.05 0.16 16 7 H 0.15 -0.71 8.14 -2.39 -0.02 -0.73 16 8 C -0.11 0.11 6.80 31.12 0.21 0.32 16 9 C 0.11 -0.52 1.46 -10.27 -0.01 -0.53 16 10 O -0.54 3.12 13.40 -148.98 -2.00 1.13 16 11 C 0.11 -0.11 5.30 86.38 0.46 0.35 16 12 N -0.72 1.78 5.29 -466.49 -2.47 -0.69 16 13 C 0.57 3.37 7.76 86.63 0.67 4.05 16 14 O -0.56 -8.59 15.15 16.88 0.26 -8.34 16 15 C -0.22 -0.75 5.89 -20.00 -0.12 -0.87 16 16 C 0.21 1.02 6.70 22.82 0.15 1.17 16 17 O -0.30 -2.25 8.56 -68.76 -0.59 -2.83 16 18 C 0.01 -0.02 9.81 113.37 1.11 1.09 16 19 C -0.31 0.02 8.01 22.43 0.18 0.20 16 20 C 0.20 0.01 6.62 22.60 0.15 0.16 16 21 O -0.32 0.60 9.36 -90.37 -0.85 -0.24 16 22 C 0.01 -0.11 9.80 113.37 1.11 1.01 16 23 C -0.20 0.10 5.27 -19.80 -0.10 0.00 16 24 C -0.08 0.07 2.32 71.24 0.17 0.23 16 25 O -0.55 -0.48 12.65 -148.98 -1.89 -2.37 16 26 Si 0.81 -3.53 30.16 68.60 2.07 -1.46 16 27 C 0.01 -0.02 8.14 22.50 0.18 0.16 16 28 C -0.14 0.84 7.03 31.18 0.22 1.06 16 29 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 30 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 31 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 32 H 0.07 0.12 8.13 -2.39 -0.02 0.10 16 33 H 0.07 0.14 8.13 -2.39 -0.02 0.12 16 34 H 0.10 0.16 7.39 -2.39 -0.02 0.14 16 35 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 36 H 0.39 -5.28 7.41 -74.06 -0.55 -5.82 16 37 H 0.07 0.17 8.14 -2.39 -0.02 0.15 16 38 H 0.08 0.09 7.98 -2.39 -0.02 0.07 16 39 H 0.41 -4.26 5.14 -92.71 -0.48 -4.73 16 40 H 0.07 -0.39 7.65 -2.38 -0.02 -0.41 16 41 H 0.07 -0.38 7.67 -2.39 -0.02 -0.40 16 42 H 0.11 -0.40 8.14 -2.39 -0.02 -0.42 16 43 H 0.16 -0.82 4.50 -2.91 -0.01 -0.83 16 44 H 0.12 -1.38 8.14 -2.38 -0.02 -1.39 16 45 H 0.07 -0.63 7.65 -2.39 -0.02 -0.65 16 46 H 0.07 -0.71 7.65 -2.39 -0.02 -0.73 16 47 H 0.07 0.01 7.82 -2.38 -0.02 -0.01 16 48 H 0.37 -0.95 8.58 -74.06 -0.64 -1.59 16 49 H -0.25 0.93 7.11 99.48 0.71 1.64 16 50 H -0.30 -1.03 7.11 99.48 0.71 -0.33 16 51 H 0.17 -1.70 3.43 -2.91 -0.01 -1.71 16 52 H 0.12 -1.33 8.14 -2.38 -0.02 -1.35 16 53 H 0.10 -0.45 7.94 -2.39 -0.02 -0.47 16 Total: 0.00 -29.65 434.08 -0.22 -29.88 By element: Atomic # 1 Polarization: -19.95 SS G_CDS: -0.63 Total: -20.58 kcal Atomic # 6 Polarization: 6.90 SS G_CDS: 6.05 Total: 12.95 kcal Atomic # 7 Polarization: 1.78 SS G_CDS: -2.47 Total: -0.69 kcal Atomic # 8 Polarization: -14.85 SS G_CDS: -5.24 Total: -20.09 kcal Atomic # 14 Polarization: -3.53 SS G_CDS: 2.07 Total: -1.46 kcal Total: -29.65 -0.22 -29.88 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_12297780.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -184.916 kcal (2) G-P(sol) polarization free energy of solvation -29.653 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -214.569 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.223 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.876 kcal (6) G-S(sol) free energy of system = (1) + (5) -214.792 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds