Wall clock time and date at job start Sun Mar 7 2021 07:02:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.45196 * 109.47070 * 2 1 4 4 C 1.34234 * 116.99938 * 179.97438 * 3 2 1 5 5 O 1.20822 * 119.99973 * 0.02562 * 4 3 2 6 6 C 1.50700 * 120.00068 * 179.97438 * 4 3 2 7 7 H 1.08999 * 112.85013 * 48.79797 * 6 4 3 8 8 C 1.53773 * 113.61589 * 180.02562 * 6 4 3 9 9 C 1.53783 * 87.08167 * 139.98020 * 8 6 4 10 10 O 1.42893 * 113.61512 * 89.11778 * 9 8 6 11 11 C 1.53006 * 113.61329 * 220.01849 * 9 8 6 12 12 N 1.46496 * 109.47098 * 180.02562 * 11 9 8 13 13 C 1.34778 * 120.00026 * 180.02562 * 12 11 9 14 14 O 1.21277 * 119.99934 * 359.97438 * 13 12 11 15 15 C 1.50703 * 119.99898 * 179.97438 * 13 12 11 16 16 C 1.50699 * 109.46709 * 179.97438 * 15 13 12 17 17 C 1.38238 * 120.00108 * 269.72438 * 16 15 13 18 18 C 1.38236 * 119.99896 * 179.77265 * 17 16 15 19 19 C 1.38235 * 120.00020 * 0.50092 * 18 17 16 20 20 C 1.50696 * 120.00094 * 179.72750 * 19 18 17 21 21 O 1.42904 * 109.47134 * 245.02848 * 20 19 18 22 22 Si 1.86302 * 109.47068 * 5.02373 * 20 19 18 23 23 C 1.38236 * 119.99879 * 359.75742 * 19 18 17 24 24 C 1.38229 * 120.00182 * 359.97438 * 23 19 18 25 25 C 1.53782 * 87.08248 * 334.56531 * 9 8 6 26 26 H 1.08998 * 109.47592 * 300.00297 * 1 2 3 27 27 H 1.08999 * 109.47084 * 60.00195 * 1 2 3 28 28 H 1.08999 * 109.47659 * 180.02562 * 1 2 3 29 29 H 1.08996 * 109.47090 * 239.99632 * 2 1 3 30 30 H 1.08999 * 109.47084 * 119.99805 * 2 1 3 31 31 H 1.09003 * 113.61414 * 254.52677 * 8 6 4 32 32 H 1.09000 * 113.61305 * 25.43121 * 8 6 4 33 33 H 0.96698 * 114.00284 * 179.97438 * 10 9 8 34 34 H 1.09007 * 109.47034 * 300.00253 * 11 9 8 35 35 H 1.08999 * 109.47156 * 60.00054 * 11 9 8 36 36 H 0.97000 * 119.99877 * 359.97438 * 12 11 9 37 37 H 1.08993 * 109.46909 * 299.99504 * 15 13 12 38 38 H 1.09001 * 109.47111 * 60.00140 * 15 13 12 39 39 H 1.08000 * 119.99989 * 0.02562 * 17 16 15 40 40 H 1.08003 * 119.99987 * 180.23743 * 18 17 16 41 41 H 1.09002 * 109.47196 * 125.02829 * 20 19 18 42 42 H 0.96698 * 114.00151 * 59.99947 * 21 20 19 43 43 H 1.48499 * 109.99933 * 179.97438 * 22 20 19 44 44 H 1.48496 * 110.00146 * 301.32104 * 22 20 19 45 45 H 1.08005 * 120.00078 * 179.97438 * 23 19 18 46 46 H 1.07996 * 120.00351 * 179.97438 * 24 23 19 47 47 H 1.08997 * 113.61322 * 270.88478 * 25 9 8 48 48 H 1.08998 * 113.60983 * 139.97830 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9208 2.9374 0.0000 7 1 3.4708 3.5819 0.7551 8 6 5.4582 2.9681 0.0001 9 6 5.3565 4.1420 -0.9880 10 8 5.2816 5.4199 -0.3530 11 6 6.3988 4.0933 -2.1071 12 7 6.2208 5.2480 -2.9909 13 6 7.0321 5.4142 -4.0542 14 8 7.9098 4.6080 -4.2791 15 6 6.8487 6.6018 -4.9636 16 6 7.8754 6.5537 -6.0657 17 6 9.1003 7.1717 -5.8966 18 6 10.0439 7.1236 -6.9058 19 6 9.7586 6.4664 -8.0880 20 6 10.7848 6.4192 -9.1905 21 8 10.2973 7.1367 -10.3261 22 14 12.3697 7.1984 -8.5973 23 6 8.5316 5.8531 -8.2591 24 6 7.5902 5.8964 -7.2479 25 6 3.9863 3.5763 -1.3974 26 1 -0.3634 0.5139 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3634 -1.0276 0.0005 29 1 1.8933 -0.5139 -0.8899 30 1 1.8933 -0.5138 0.8900 31 1 5.8893 3.2436 0.9625 32 1 5.9127 2.0748 -0.4284 33 1 5.2179 6.1623 -0.9693 34 1 7.3987 4.1185 -1.6737 35 1 6.2742 3.1743 -2.6799 36 1 5.5186 5.8926 -2.8111 37 1 5.8488 6.5766 -5.3967 38 1 6.9737 7.5207 -4.3909 39 1 9.3217 7.6885 -4.9745 40 1 11.0023 7.6031 -6.7722 41 1 10.9717 5.3821 -9.4688 42 1 10.1090 8.0689 -10.1513 43 1 13.3903 7.1576 -9.6753 44 1 12.1218 8.6032 -8.1848 45 1 8.3085 5.3400 -9.1830 46 1 6.6315 5.4176 -7.3817 47 1 4.0386 2.8494 -2.2078 48 1 3.2293 4.3428 -1.5630 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_12335836.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:02:04 Heat of formation + Delta-G solvation = -147.551226 kcal Electronic energy + Delta-G solvation = -29943.143339 eV Core-core repulsion = 25544.742271 eV Total energy + Delta-G solvation = -4398.401068 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.15057 -41.23504 -40.56943 -39.83933 -37.75217 -37.63384 -36.08648 -35.38616 -34.10713 -32.73159 -31.93754 -30.62870 -29.04958 -27.15152 -26.47448 -25.38883 -23.82905 -23.80793 -22.32305 -21.92106 -21.45548 -20.88696 -19.15118 -18.58970 -18.44508 -17.76363 -17.64408 -17.42171 -17.19665 -16.89164 -16.62281 -16.38262 -16.17096 -16.09922 -15.77253 -15.30275 -15.03934 -14.82026 -14.72097 -14.58933 -14.42077 -14.25754 -13.96378 -13.88861 -13.64943 -13.42984 -13.25425 -13.14811 -12.98228 -12.88928 -12.78976 -12.63438 -12.38753 -12.24862 -11.98330 -11.80007 -11.55050 -11.53807 -11.46291 -11.06767 -10.96398 -10.54834 -10.28511 -9.85328 -9.63461 -4.91702 0.23892 0.47790 1.14631 1.31856 1.55665 1.60860 1.61332 1.92297 1.98090 2.63728 2.75207 2.99799 3.24970 3.32197 3.36584 3.40124 3.52951 3.74212 3.79355 3.83846 3.88717 3.92552 3.98059 4.02304 4.06051 4.18092 4.26074 4.27030 4.32315 4.43210 4.46074 4.47069 4.58233 4.61290 4.67906 4.69229 4.71191 4.77419 4.79797 4.97374 4.99181 4.99478 5.07691 5.15234 5.38568 5.44993 5.55531 5.57905 6.00132 6.19936 6.29735 6.42778 6.73447 7.09562 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.470 3.530 5 O -0.504 6.504 6 C -0.103 4.103 7 H 0.132 0.868 8 C -0.101 4.101 9 C 0.098 3.902 10 O -0.530 6.530 11 C 0.104 3.896 12 N -0.735 5.735 13 C 0.516 3.484 14 O -0.520 6.520 15 C -0.103 4.103 16 C -0.065 4.065 17 C -0.100 4.100 18 C -0.116 4.116 19 C -0.116 4.116 20 C -0.076 4.076 21 O -0.530 6.530 22 Si 0.686 3.314 23 C -0.090 4.090 24 C -0.104 4.104 25 C -0.145 4.145 26 H 0.067 0.933 27 H 0.067 0.933 28 H 0.081 0.919 29 H 0.071 0.929 30 H 0.071 0.929 31 H 0.094 0.906 32 H 0.115 0.885 33 H 0.377 0.623 34 H 0.082 0.918 35 H 0.083 0.917 36 H 0.397 0.603 37 H 0.105 0.895 38 H 0.106 0.894 39 H 0.124 0.876 40 H 0.127 0.873 41 H 0.118 0.882 42 H 0.375 0.625 43 H -0.257 1.257 44 H -0.261 1.261 45 H 0.126 0.874 46 H 0.122 0.878 47 H 0.098 0.902 48 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.616 3.124 2.258 6.014 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.392 6.392 6 C -0.122 4.122 7 H 0.150 0.850 8 C -0.139 4.139 9 C 0.056 3.944 10 O -0.336 6.336 11 C -0.020 4.020 12 N -0.391 5.391 13 C 0.302 3.698 14 O -0.394 6.394 15 C -0.143 4.143 16 C -0.065 4.065 17 C -0.118 4.118 18 C -0.134 4.134 19 C -0.116 4.116 20 C -0.186 4.186 21 O -0.336 6.336 22 Si 0.588 3.412 23 C -0.108 4.108 24 C -0.122 4.122 25 C -0.183 4.183 26 H 0.087 0.913 27 H 0.086 0.914 28 H 0.100 0.900 29 H 0.089 0.911 30 H 0.090 0.910 31 H 0.113 0.887 32 H 0.133 0.867 33 H 0.226 0.774 34 H 0.101 0.899 35 H 0.102 0.898 36 H 0.231 0.769 37 H 0.124 0.876 38 H 0.124 0.876 39 H 0.142 0.858 40 H 0.144 0.856 41 H 0.136 0.864 42 H 0.223 0.777 43 H -0.182 1.182 44 H -0.185 1.185 45 H 0.144 0.856 46 H 0.140 0.860 47 H 0.116 0.884 48 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -3.074 1.887 2.230 4.240 hybrid contribution -1.337 1.130 -0.793 1.922 sum -4.411 3.017 1.437 5.534 Atomic orbital electron populations 1.21820 0.92310 1.03285 1.03650 1.23093 0.95632 0.79849 1.02778 1.86518 1.24366 1.32762 1.83672 1.23527 0.80706 0.92305 0.72173 1.90689 1.60511 1.42913 1.45059 1.22418 0.97289 0.91044 1.01403 0.85030 1.23063 0.93226 0.96681 1.00891 1.22372 0.93678 0.85424 0.92912 1.86608 1.96270 1.14379 1.36318 1.21925 0.99859 0.89809 0.90370 1.45918 1.36393 1.28001 1.28745 1.20581 0.81239 0.87201 0.80773 1.90783 1.32362 1.44611 1.71670 1.20691 1.00372 0.97748 0.95462 1.19255 0.94734 0.98315 0.94208 1.20908 0.92783 0.99371 0.98701 1.20993 0.99141 0.99691 0.93546 1.20261 0.96328 0.99421 0.95608 1.25028 1.03548 1.02294 0.87682 1.86605 1.86285 1.26391 1.34323 0.94830 0.77462 0.82867 0.86045 1.20969 0.92712 0.98314 0.98839 1.21011 0.99642 0.98427 0.93093 1.23675 0.98288 1.00974 0.95315 0.91348 0.91389 0.89984 0.91105 0.91048 0.88730 0.86716 0.77404 0.89950 0.89837 0.76878 0.87641 0.87560 0.85777 0.85577 0.86434 0.77738 1.18233 1.18549 0.85640 0.86003 0.88367 0.89076 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.27 10.29 37.16 0.38 0.65 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.52 10.22 -39.27 -0.40 -0.92 16 4 C 0.47 0.79 7.48 36.01 0.27 1.06 16 5 O -0.50 -2.26 15.65 -18.75 -0.29 -2.55 16 6 C -0.10 0.11 4.19 -90.96 -0.38 -0.27 16 7 H 0.13 -0.25 8.14 -51.93 -0.42 -0.67 16 8 C -0.10 0.12 6.80 -25.92 -0.18 -0.06 16 9 C 0.10 -0.26 1.49 -89.80 -0.13 -0.39 16 10 O -0.53 1.39 13.41 -35.23 -0.47 0.92 16 11 C 0.10 -0.19 5.32 -4.04 -0.02 -0.21 16 12 N -0.74 2.35 5.34 -60.29 -0.32 2.03 16 13 C 0.52 -0.18 7.82 -10.98 -0.09 -0.26 16 14 O -0.52 -2.35 16.03 5.56 0.09 -2.27 16 15 C -0.10 0.29 5.83 -29.03 -0.17 0.12 16 16 C -0.06 -0.02 4.37 -104.62 -0.46 -0.47 16 17 C -0.10 -0.04 9.70 -39.58 -0.38 -0.42 16 18 C -0.12 -0.07 8.67 -39.58 -0.34 -0.42 16 19 C -0.12 -0.13 5.35 -104.63 -0.56 -0.69 16 20 C -0.08 -0.05 2.80 36.00 0.10 0.05 16 21 O -0.53 -0.97 12.83 -35.23 -0.45 -1.42 16 22 Si 0.69 -0.11 29.88 -169.99 -5.08 -5.19 16 23 C -0.09 -0.13 9.69 -39.59 -0.38 -0.51 16 24 C -0.10 -0.09 9.70 -39.58 -0.38 -0.47 16 25 C -0.14 0.41 7.01 -25.91 -0.18 0.23 16 26 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 27 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 29 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 30 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 31 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 32 H 0.11 -0.06 7.39 -51.93 -0.38 -0.44 16 33 H 0.38 -2.34 7.30 45.56 0.33 -2.01 16 34 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 35 H 0.08 -0.07 7.94 -51.93 -0.41 -0.48 16 36 H 0.40 -2.59 7.03 -40.82 -0.29 -2.88 16 37 H 0.11 -0.51 8.09 -51.93 -0.42 -0.93 16 38 H 0.11 -0.54 8.08 -51.93 -0.42 -0.96 16 39 H 0.12 -0.17 8.06 -52.49 -0.42 -0.60 16 40 H 0.13 -0.11 4.85 -52.48 -0.25 -0.37 16 41 H 0.12 0.02 7.96 -51.93 -0.41 -0.39 16 42 H 0.38 -0.42 8.70 45.56 0.40 -0.02 16 43 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 44 H -0.26 -0.37 7.01 56.52 0.40 0.02 16 45 H 0.13 0.11 8.06 -52.48 -0.42 -0.31 16 46 H 0.12 -0.08 8.06 -52.49 -0.42 -0.51 16 47 H 0.10 -0.24 7.91 -51.93 -0.41 -0.65 16 48 H 0.09 -0.37 8.14 -51.93 -0.42 -0.79 16 LS Contribution 402.88 15.07 6.07 6.07 Total: 0.00 -10.95 402.88 -10.09 -21.04 By element: Atomic # 1 Polarization: -9.34 SS G_CDS: -6.55 Total: -15.88 kcal Atomic # 6 Polarization: 0.85 SS G_CDS: -2.68 Total: -1.83 kcal Atomic # 7 Polarization: 2.35 SS G_CDS: -0.32 Total: 2.03 kcal Atomic # 8 Polarization: -4.71 SS G_CDS: -1.53 Total: -6.24 kcal Atomic # 14 Polarization: -0.11 SS G_CDS: -5.08 Total: -5.19 kcal Total LS contribution 6.07 Total: 6.07 kcal Total: -10.95 -10.09 -21.04 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_12335836.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.511 kcal (2) G-P(sol) polarization free energy of solvation -10.952 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.463 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.088 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.040 kcal (6) G-S(sol) free energy of system = (1) + (5) -147.551 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds