Wall clock time and date at job start Sun Mar 7 2021 07:02:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.45196 * 109.47070 * 2 1 4 4 C 1.34234 * 116.99938 * 179.97438 * 3 2 1 5 5 O 1.20822 * 119.99973 * 0.02562 * 4 3 2 6 6 C 1.50700 * 120.00068 * 179.97438 * 4 3 2 7 7 H 1.08999 * 112.85013 * 48.79797 * 6 4 3 8 8 C 1.53773 * 113.61589 * 180.02562 * 6 4 3 9 9 C 1.53783 * 87.08167 * 139.98020 * 8 6 4 10 10 O 1.42893 * 113.61512 * 89.11778 * 9 8 6 11 11 C 1.53006 * 113.61329 * 220.01849 * 9 8 6 12 12 N 1.46496 * 109.47098 * 180.02562 * 11 9 8 13 13 C 1.34778 * 120.00026 * 180.02562 * 12 11 9 14 14 O 1.21277 * 119.99934 * 359.97438 * 13 12 11 15 15 C 1.50703 * 119.99898 * 179.97438 * 13 12 11 16 16 C 1.50699 * 109.46709 * 179.97438 * 15 13 12 17 17 C 1.38238 * 120.00108 * 269.72438 * 16 15 13 18 18 C 1.38236 * 119.99896 * 179.77265 * 17 16 15 19 19 C 1.38235 * 120.00020 * 0.50092 * 18 17 16 20 20 C 1.50696 * 120.00094 * 179.72750 * 19 18 17 21 21 O 1.42904 * 109.47134 * 245.02848 * 20 19 18 22 22 Si 1.86302 * 109.47068 * 5.02373 * 20 19 18 23 23 C 1.38236 * 119.99879 * 359.75742 * 19 18 17 24 24 C 1.38229 * 120.00182 * 359.97438 * 23 19 18 25 25 C 1.53782 * 87.08248 * 334.56531 * 9 8 6 26 26 H 1.08998 * 109.47592 * 300.00297 * 1 2 3 27 27 H 1.08999 * 109.47084 * 60.00195 * 1 2 3 28 28 H 1.08999 * 109.47659 * 180.02562 * 1 2 3 29 29 H 1.08996 * 109.47090 * 239.99632 * 2 1 3 30 30 H 1.08999 * 109.47084 * 119.99805 * 2 1 3 31 31 H 1.09003 * 113.61414 * 254.52677 * 8 6 4 32 32 H 1.09000 * 113.61305 * 25.43121 * 8 6 4 33 33 H 0.96698 * 114.00284 * 179.97438 * 10 9 8 34 34 H 1.09007 * 109.47034 * 300.00253 * 11 9 8 35 35 H 1.08999 * 109.47156 * 60.00054 * 11 9 8 36 36 H 0.97000 * 119.99877 * 359.97438 * 12 11 9 37 37 H 1.08993 * 109.46909 * 299.99504 * 15 13 12 38 38 H 1.09001 * 109.47111 * 60.00140 * 15 13 12 39 39 H 1.08000 * 119.99989 * 0.02562 * 17 16 15 40 40 H 1.08003 * 119.99987 * 180.23743 * 18 17 16 41 41 H 1.09002 * 109.47196 * 125.02829 * 20 19 18 42 42 H 0.96698 * 114.00151 * 59.99947 * 21 20 19 43 43 H 1.48499 * 109.99933 * 179.97438 * 22 20 19 44 44 H 1.48496 * 110.00146 * 301.32104 * 22 20 19 45 45 H 1.08005 * 120.00078 * 179.97438 * 23 19 18 46 46 H 1.07996 * 120.00351 * 179.97438 * 24 23 19 47 47 H 1.08997 * 113.61322 * 270.88478 * 25 9 8 48 48 H 1.08998 * 113.60983 * 139.97830 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9208 2.9374 0.0000 7 1 3.4708 3.5819 0.7551 8 6 5.4582 2.9681 0.0001 9 6 5.3565 4.1420 -0.9880 10 8 5.2816 5.4199 -0.3530 11 6 6.3988 4.0933 -2.1071 12 7 6.2208 5.2480 -2.9909 13 6 7.0321 5.4142 -4.0542 14 8 7.9098 4.6080 -4.2791 15 6 6.8487 6.6018 -4.9636 16 6 7.8754 6.5537 -6.0657 17 6 9.1003 7.1717 -5.8966 18 6 10.0439 7.1236 -6.9058 19 6 9.7586 6.4664 -8.0880 20 6 10.7848 6.4192 -9.1905 21 8 10.2973 7.1367 -10.3261 22 14 12.3697 7.1984 -8.5973 23 6 8.5316 5.8531 -8.2591 24 6 7.5902 5.8964 -7.2479 25 6 3.9863 3.5763 -1.3974 26 1 -0.3634 0.5139 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3634 -1.0276 0.0005 29 1 1.8933 -0.5139 -0.8899 30 1 1.8933 -0.5138 0.8900 31 1 5.8893 3.2436 0.9625 32 1 5.9127 2.0748 -0.4284 33 1 5.2179 6.1623 -0.9693 34 1 7.3987 4.1185 -1.6737 35 1 6.2742 3.1743 -2.6799 36 1 5.5186 5.8926 -2.8111 37 1 5.8488 6.5766 -5.3967 38 1 6.9737 7.5207 -4.3909 39 1 9.3217 7.6885 -4.9745 40 1 11.0023 7.6031 -6.7722 41 1 10.9717 5.3821 -9.4688 42 1 10.1090 8.0689 -10.1513 43 1 13.3903 7.1576 -9.6753 44 1 12.1218 8.6032 -8.1848 45 1 8.3085 5.3400 -9.1830 46 1 6.6315 5.4176 -7.3817 47 1 4.0386 2.8494 -2.2078 48 1 3.2293 4.3428 -1.5630 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_12335836.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:02:03 Heat of formation + Delta-G solvation = -150.240112 kcal Electronic energy + Delta-G solvation = -29943.259938 eV Core-core repulsion = 25544.742271 eV Total energy + Delta-G solvation = -4398.517666 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -42.14209 -41.22184 -40.54529 -39.82494 -37.82586 -37.73491 -35.99054 -35.28252 -34.06119 -32.68731 -31.92931 -30.56086 -28.96248 -27.00549 -26.45401 -25.35872 -23.81781 -23.76265 -22.31338 -21.89300 -21.39342 -20.77246 -19.11075 -18.62498 -18.45702 -17.80177 -17.60197 -17.37234 -17.16993 -16.82568 -16.59484 -16.25941 -16.19916 -16.03855 -15.75604 -15.27398 -15.01237 -14.82868 -14.71580 -14.54488 -14.39706 -14.15501 -13.98641 -13.80045 -13.51463 -13.30475 -13.26006 -13.08198 -12.97905 -12.84900 -12.71360 -12.57245 -12.27611 -12.26838 -12.00722 -11.73869 -11.60005 -11.58814 -11.46504 -11.01968 -10.88892 -10.60929 -10.19132 -9.86555 -9.62540 -4.93510 0.24217 0.46492 1.03719 1.28908 1.55870 1.60255 1.63790 1.90913 2.07143 2.76947 2.86687 3.12087 3.38876 3.40813 3.45149 3.49588 3.61945 3.79547 3.90708 3.91273 3.94741 4.02283 4.05023 4.06534 4.21621 4.29811 4.33083 4.38997 4.48080 4.55343 4.58481 4.63867 4.67148 4.70712 4.73594 4.80203 4.87304 4.87708 4.91414 5.03625 5.09790 5.10748 5.13279 5.30631 5.38920 5.40737 5.54397 5.59733 6.02737 6.45528 6.46739 6.62706 6.67332 7.24129 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.102 4.102 7 H 0.145 0.855 8 C -0.110 4.110 9 C 0.117 3.883 10 O -0.538 6.538 11 C 0.108 3.892 12 N -0.717 5.717 13 C 0.515 3.485 14 O -0.576 6.576 15 C -0.097 4.097 16 C -0.072 4.072 17 C -0.110 4.110 18 C -0.126 4.126 19 C -0.125 4.125 20 C -0.084 4.084 21 O -0.548 6.548 22 Si 0.763 3.237 23 C -0.108 4.108 24 C -0.116 4.116 25 C -0.135 4.135 26 H 0.069 0.931 27 H 0.070 0.930 28 H 0.095 0.905 29 H 0.067 0.933 30 H 0.066 0.934 31 H 0.092 0.908 32 H 0.102 0.898 33 H 0.394 0.606 34 H 0.066 0.934 35 H 0.071 0.929 36 H 0.416 0.584 37 H 0.132 0.868 38 H 0.137 0.863 39 H 0.142 0.858 40 H 0.139 0.861 41 H 0.118 0.882 42 H 0.386 0.614 43 H -0.302 1.302 44 H -0.277 1.277 45 H 0.122 0.878 46 H 0.133 0.867 47 H 0.093 0.907 48 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.115 4.723 3.042 8.304 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.314 3.686 5 O -0.429 6.429 6 C -0.121 4.121 7 H 0.162 0.838 8 C -0.148 4.148 9 C 0.075 3.925 10 O -0.347 6.347 11 C -0.016 4.016 12 N -0.373 5.373 13 C 0.303 3.697 14 O -0.455 6.455 15 C -0.136 4.136 16 C -0.073 4.073 17 C -0.128 4.128 18 C -0.143 4.143 19 C -0.126 4.126 20 C -0.193 4.193 21 O -0.357 6.357 22 Si 0.668 3.332 23 C -0.127 4.127 24 C -0.134 4.134 25 C -0.172 4.172 26 H 0.088 0.912 27 H 0.089 0.911 28 H 0.114 0.886 29 H 0.086 0.914 30 H 0.085 0.915 31 H 0.110 0.890 32 H 0.120 0.880 33 H 0.246 0.754 34 H 0.084 0.916 35 H 0.089 0.911 36 H 0.255 0.745 37 H 0.150 0.850 38 H 0.154 0.846 39 H 0.160 0.840 40 H 0.156 0.844 41 H 0.135 0.865 42 H 0.235 0.765 43 H -0.230 1.230 44 H -0.203 1.203 45 H 0.140 0.860 46 H 0.151 0.849 47 H 0.112 0.888 48 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges -4.645 3.528 3.037 6.576 hybrid contribution -0.893 0.622 -1.030 1.498 sum -5.538 4.149 2.007 7.205 Atomic orbital electron populations 1.21823 0.90613 1.04267 1.03793 1.23256 0.96997 0.79408 1.02426 1.86528 1.24282 1.33422 1.83390 1.24116 0.80533 0.93036 0.70962 1.90671 1.61177 1.44271 1.46826 1.22549 0.96921 0.89607 1.02989 0.83772 1.23080 0.93346 0.97125 1.01237 1.22047 0.93391 0.85273 0.91779 1.86589 1.96207 1.14690 1.37187 1.21772 0.99359 0.89911 0.90581 1.45729 1.36224 1.27734 1.27566 1.21031 0.80471 0.87140 0.81085 1.90770 1.34854 1.46702 1.73147 1.20770 1.00764 0.97653 0.94434 1.19607 0.95459 0.97470 0.94722 1.21243 0.92843 0.99444 0.99262 1.21200 0.99899 0.99717 0.93501 1.20318 0.96366 0.99896 0.95991 1.25217 1.04123 1.02514 0.87453 1.86565 1.86521 1.27436 1.35133 0.93924 0.74431 0.80937 0.83902 1.21104 0.93361 0.98961 0.99225 1.21252 1.00064 0.98683 0.93391 1.23654 0.98525 1.01073 0.93982 0.91239 0.91121 0.88609 0.91423 0.91539 0.88956 0.87983 0.75438 0.91574 0.91071 0.74543 0.85020 0.84560 0.83986 0.84402 0.86452 0.76505 1.23032 1.20312 0.85972 0.84936 0.88801 0.86874 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.57 10.29 71.98 0.74 1.31 16 2 C 0.05 0.05 6.19 71.98 0.45 0.50 16 3 O -0.36 -1.17 10.22 -51.46 -0.53 -1.69 16 4 C 0.47 1.93 7.48 71.24 0.53 2.46 16 5 O -0.54 -5.73 15.65 21.98 0.34 -5.38 16 6 C -0.10 0.25 4.19 -11.01 -0.05 0.20 16 7 H 0.14 -0.70 8.14 -2.39 -0.02 -0.72 16 8 C -0.11 0.19 6.80 31.12 0.21 0.41 16 9 C 0.12 -0.71 1.49 -10.26 -0.02 -0.72 16 10 O -0.54 3.85 13.41 -148.98 -2.00 1.86 16 11 C 0.11 -0.39 5.32 86.38 0.46 0.07 16 12 N -0.72 5.58 5.34 -463.05 -2.47 3.11 16 13 C 0.51 -0.82 7.82 87.66 0.69 -0.13 16 14 O -0.58 -5.58 16.03 -3.02 -0.05 -5.63 16 15 C -0.10 0.74 5.83 29.10 0.17 0.91 16 16 C -0.07 0.02 4.37 -19.86 -0.09 -0.07 16 17 C -0.11 -0.02 9.70 22.27 0.22 0.20 16 18 C -0.13 -0.16 8.67 22.27 0.19 0.03 16 19 C -0.13 -0.38 5.35 -19.87 -0.11 -0.49 16 20 C -0.08 -0.19 2.80 71.23 0.20 0.01 16 21 O -0.55 -2.55 12.83 -148.98 -1.91 -4.46 16 22 Si 0.76 0.20 29.88 68.60 2.05 2.25 16 23 C -0.11 -0.42 9.69 22.27 0.22 -0.21 16 24 C -0.12 -0.21 9.70 22.27 0.22 0.00 16 25 C -0.13 0.91 7.01 31.12 0.22 1.13 16 26 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 27 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 28 H 0.10 -0.63 8.14 -2.39 -0.02 -0.65 16 29 H 0.07 0.09 8.13 -2.39 -0.02 0.07 16 30 H 0.07 0.11 8.13 -2.39 -0.02 0.09 16 31 H 0.09 -0.14 8.14 -2.39 -0.02 -0.16 16 32 H 0.10 0.09 7.39 -2.39 -0.02 0.07 16 33 H 0.39 -5.99 7.30 -74.06 -0.54 -6.53 16 34 H 0.07 0.02 8.14 -2.38 -0.02 0.00 16 35 H 0.07 -0.04 7.94 -2.39 -0.02 -0.06 16 36 H 0.42 -6.58 7.03 -92.71 -0.65 -7.23 16 37 H 0.13 -1.67 8.09 -2.39 -0.02 -1.69 16 38 H 0.14 -1.84 8.08 -2.39 -0.02 -1.86 16 39 H 0.14 -0.60 8.06 -2.91 -0.02 -0.62 16 40 H 0.14 -0.29 4.85 -2.91 -0.01 -0.30 16 41 H 0.12 0.20 7.96 -2.39 -0.02 0.18 16 42 H 0.39 -0.53 8.70 -74.06 -0.64 -1.18 16 43 H -0.30 -2.32 7.11 99.48 0.71 -1.61 16 44 H -0.28 -0.79 7.01 99.48 0.70 -0.10 16 45 H 0.12 0.42 8.06 -2.91 -0.02 0.39 16 46 H 0.13 -0.19 8.06 -2.91 -0.02 -0.21 16 47 H 0.09 -0.50 7.91 -2.39 -0.02 -0.52 16 48 H 0.11 -1.22 8.14 -2.39 -0.02 -1.24 16 Total: 0.00 -27.70 402.88 -1.12 -28.81 By element: Atomic # 1 Polarization: -23.68 SS G_CDS: -0.81 Total: -24.49 kcal Atomic # 6 Polarization: 1.37 SS G_CDS: 4.25 Total: 5.62 kcal Atomic # 7 Polarization: 5.58 SS G_CDS: -2.47 Total: 3.11 kcal Atomic # 8 Polarization: -11.16 SS G_CDS: -4.14 Total: -15.31 kcal Atomic # 14 Polarization: 0.20 SS G_CDS: 2.05 Total: 2.25 kcal Total: -27.70 -1.12 -28.81 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_12335836.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.428 kcal (2) G-P(sol) polarization free energy of solvation -27.696 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -149.123 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.117 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.812 kcal (6) G-S(sol) free energy of system = (1) + (5) -150.240 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds