Wall clock time and date at job start Sun Mar 7 2021 07:02:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.45205 * 109.47507 * 2 1 4 4 C 1.34226 * 116.99951 * 179.97438 * 3 2 1 5 5 O 1.20823 * 120.00537 * 0.02562 * 4 3 2 6 6 C 1.50703 * 119.99889 * 179.97438 * 4 3 2 7 7 H 1.09010 * 112.84442 * 48.80654 * 6 4 3 8 8 C 1.53775 * 113.61724 * 180.02562 * 6 4 3 9 9 C 1.53786 * 87.08112 * 140.06992 * 8 6 4 10 10 O 1.42896 * 113.61350 * 89.20303 * 9 8 6 11 11 C 1.53000 * 113.61264 * 220.02310 * 9 8 6 12 12 N 1.46497 * 109.46754 * 178.47114 * 11 9 8 13 13 C 1.34781 * 119.99680 * 179.97438 * 12 11 9 14 14 O 1.21586 * 120.00294 * 359.97438 * 13 12 11 15 15 C 1.47580 * 119.99765 * 179.97438 * 13 12 11 16 16 C 1.40195 * 119.83306 * 359.97438 * 15 13 12 17 17 C 1.36231 * 120.37664 * 180.02562 * 16 15 13 18 18 C 1.39869 * 119.96189 * 359.95460 * 17 16 15 19 19 C 1.40927 * 120.16797 * 0.04313 * 18 17 16 20 20 C 1.38645 * 119.48930 * 359.97438 * 19 18 17 21 21 N 1.37834 * 107.12711 * 179.97438 * 19 18 17 22 22 C 1.36563 * 109.86053 * 359.74028 * 21 19 18 23 23 C 1.34458 * 109.98312 * 0.43973 * 22 21 19 24 24 C 1.50702 * 126.47904 * 179.83050 * 23 22 21 25 25 O 1.42903 * 109.47007 * 104.69735 * 24 23 22 26 26 Si 1.86300 * 109.47301 * 344.69222 * 24 23 22 27 27 C 1.53782 * 87.17244 * 334.61108 * 9 8 6 28 28 H 1.09000 * 109.46824 * 59.99925 * 1 2 3 29 29 H 1.09000 * 109.47191 * 180.02562 * 1 2 3 30 30 H 1.08997 * 109.46960 * 300.00115 * 1 2 3 31 31 H 1.09003 * 109.47276 * 239.99627 * 2 1 3 32 32 H 1.09006 * 109.46989 * 119.99644 * 2 1 3 33 33 H 1.09001 * 113.61102 * 25.52033 * 8 6 4 34 34 H 1.09000 * 113.61848 * 254.61959 * 8 6 4 35 35 H 0.96701 * 113.99430 * 181.52770 * 10 9 8 36 36 H 1.09002 * 109.47274 * 58.47072 * 11 9 8 37 37 H 1.09004 * 109.46970 * 298.47047 * 11 9 8 38 38 H 0.96996 * 120.00285 * 359.97438 * 12 11 9 39 39 H 1.07998 * 119.81374 * 0.02562 * 16 15 13 40 40 H 1.08008 * 120.02069 * 180.02562 * 17 16 15 41 41 H 1.08006 * 120.16338 * 180.02562 * 20 19 18 42 42 H 0.96998 * 125.07005 * 179.97438 * 21 19 18 43 43 H 1.07999 * 125.00962 * 180.30965 * 22 21 19 44 44 H 1.09004 * 109.46923 * 224.69304 * 24 23 22 45 45 H 0.96695 * 113.99582 * 179.97438 * 25 24 23 46 46 H 1.48495 * 109.99824 * 60.00286 * 26 24 23 47 47 H 1.48498 * 109.99663 * 181.31925 * 26 24 23 48 48 H 1.09001 * 113.61565 * 139.93960 * 27 9 8 49 49 H 1.09002 * 113.61344 * 270.84714 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3690 0.0000 4 6 3.3448 1.5447 0.0005 5 8 4.0808 0.5866 0.0005 6 6 3.9209 2.9373 0.0000 7 1 3.4709 3.5817 0.7553 8 6 5.4584 2.9680 0.0001 9 6 5.3566 4.1435 -0.9862 10 8 5.2838 5.4205 -0.3492 11 6 6.3988 4.0964 -2.1054 12 7 6.1973 5.2323 -3.0083 13 6 7.0050 5.3970 -4.0747 14 8 7.9011 4.6032 -4.2870 15 6 6.8016 6.5410 -4.9846 16 6 5.7669 7.4539 -4.7368 17 6 5.5689 8.5135 -5.5698 18 6 6.4014 8.6952 -6.6790 19 6 7.4448 7.7841 -6.9382 20 6 7.6390 6.7082 -6.0854 21 7 8.0849 8.2142 -8.0805 22 6 7.4855 9.3483 -8.5492 23 6 6.4655 9.6950 -7.7446 24 6 5.5564 10.8851 -7.9126 25 8 4.2865 10.4491 -8.4019 26 14 6.3135 12.0785 -9.1265 27 6 3.9857 3.5809 -1.3971 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5138 0.8900 31 1 1.8934 -0.5139 -0.8900 32 1 1.8933 -0.5138 0.8901 33 1 5.9129 2.0754 -0.4298 34 1 5.8896 3.2419 0.9629 35 1 5.1962 6.1621 -0.9636 36 1 6.2917 3.1658 -2.6627 37 1 7.3983 4.1483 -1.6736 38 1 5.4826 5.8658 -2.8388 39 1 5.1231 7.3164 -3.8806 40 1 4.7703 9.2136 -5.3732 41 1 8.4356 6.0035 -6.2735 42 1 8.8454 7.7749 -8.4923 43 1 7.7876 9.8883 -9.4343 44 1 5.4245 11.3802 -6.9505 45 1 3.6493 11.1643 -8.5337 46 1 6.4984 11.4155 -10.4423 47 1 5.4418 13.2713 -9.2768 48 1 3.2297 4.3489 -1.5606 49 1 4.0368 2.8561 -2.2096 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_12335838.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:02:08 Heat of formation + Delta-G solvation = -110.283599 kcal Electronic energy + Delta-G solvation = -33194.665673 eV Core-core repulsion = 28476.002459 eV Total energy + Delta-G solvation = -4718.663214 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.161 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -42.45713 -42.12553 -41.07596 -40.13701 -37.91707 -37.76977 -37.52639 -36.02675 -35.40809 -33.34946 -32.69015 -31.18627 -30.75315 -29.30023 -27.02328 -26.58994 -26.24345 -24.45502 -23.64799 -23.63549 -21.93778 -21.60050 -20.77302 -20.60509 -19.49995 -18.93297 -18.53454 -18.41296 -17.79455 -17.65127 -17.37942 -17.14451 -17.07584 -16.51104 -16.10651 -15.85910 -15.70784 -15.45693 -15.18219 -14.99556 -14.94008 -14.75870 -14.72760 -14.51362 -14.38981 -14.17383 -13.83873 -13.80058 -13.51795 -13.28009 -13.14507 -12.98486 -12.79314 -12.61961 -12.57931 -12.57465 -12.28798 -12.17970 -11.86513 -11.74557 -11.58653 -11.48679 -11.15624 -10.91383 -10.76563 -10.31815 -10.30488 -9.35610 -8.78841 -4.84186 -0.32114 0.39398 1.03845 1.35892 1.40324 1.59565 1.66284 1.83888 1.87455 2.02174 2.19812 2.83940 2.88558 3.11327 3.35685 3.43173 3.46818 3.57449 3.62542 3.73168 3.83888 3.90022 3.94799 4.02329 4.05909 4.11604 4.21184 4.29786 4.30557 4.32871 4.39112 4.51844 4.58538 4.59311 4.66049 4.69093 4.79398 4.81172 4.86589 4.87496 4.90707 4.99119 5.10298 5.12679 5.19209 5.22086 5.40835 5.42510 5.52554 5.62783 5.99212 6.34289 6.52045 6.62716 6.63482 6.72191 7.07421 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.360 6.360 4 C 0.469 3.531 5 O -0.539 6.539 6 C -0.101 4.101 7 H 0.146 0.854 8 C -0.107 4.107 9 C 0.115 3.885 10 O -0.537 6.537 11 C 0.107 3.893 12 N -0.709 5.709 13 C 0.565 3.435 14 O -0.580 6.580 15 C -0.136 4.136 16 C -0.105 4.105 17 C -0.081 4.081 18 C -0.081 4.081 19 C 0.066 3.934 20 C -0.068 4.068 21 N -0.578 5.578 22 C 0.087 3.913 23 C -0.189 4.189 24 C -0.048 4.048 25 O -0.562 6.562 26 Si 0.766 3.234 27 C -0.137 4.137 28 H 0.069 0.931 29 H 0.095 0.905 30 H 0.069 0.931 31 H 0.067 0.933 32 H 0.067 0.933 33 H 0.103 0.897 34 H 0.094 0.906 35 H 0.393 0.607 36 H 0.076 0.924 37 H 0.071 0.929 38 H 0.414 0.586 39 H 0.160 0.840 40 H 0.145 0.855 41 H 0.127 0.873 42 H 0.434 0.566 43 H 0.202 0.798 44 H 0.086 0.914 45 H 0.391 0.609 46 H -0.289 1.289 47 H -0.290 1.290 48 H 0.113 0.887 49 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.055 7.186 -0.645 7.835 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.314 3.686 5 O -0.429 6.429 6 C -0.119 4.119 7 H 0.164 0.836 8 C -0.145 4.145 9 C 0.073 3.927 10 O -0.345 6.345 11 C -0.017 4.017 12 N -0.363 5.363 13 C 0.354 3.646 14 O -0.461 6.461 15 C -0.140 4.140 16 C -0.125 4.125 17 C -0.099 4.099 18 C -0.086 4.086 19 C -0.041 4.041 20 C -0.089 4.089 21 N -0.181 5.181 22 C -0.043 4.043 23 C -0.196 4.196 24 C -0.157 4.157 25 O -0.371 6.371 26 Si 0.670 3.330 27 C -0.175 4.175 28 H 0.088 0.912 29 H 0.114 0.886 30 H 0.088 0.912 31 H 0.085 0.915 32 H 0.085 0.915 33 H 0.122 0.878 34 H 0.113 0.887 35 H 0.244 0.756 36 H 0.094 0.906 37 H 0.090 0.910 38 H 0.253 0.747 39 H 0.177 0.823 40 H 0.163 0.837 41 H 0.145 0.855 42 H 0.274 0.726 43 H 0.218 0.782 44 H 0.104 0.896 45 H 0.241 0.759 46 H -0.216 1.216 47 H -0.217 1.217 48 H 0.132 0.868 49 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -1.888 5.727 -1.015 6.115 hybrid contribution -1.050 -0.285 -0.703 1.296 sum -2.938 5.442 -1.718 6.419 Atomic orbital electron populations 1.21824 0.90626 1.04264 1.03783 1.23262 0.96991 0.79409 1.02433 1.86528 1.24274 1.33427 1.83384 1.24089 0.80536 0.93000 0.70967 1.90670 1.61166 1.44247 1.46819 1.22565 0.96911 0.89630 1.02842 0.83647 1.23061 0.93372 0.96879 1.01185 1.22083 0.93359 0.85472 0.91768 1.86583 1.95996 1.14777 1.37171 1.21895 0.99795 0.89893 0.90166 1.45564 1.34887 1.29447 1.26397 1.18349 0.80859 0.84563 0.80844 1.90788 1.34222 1.46708 1.74410 1.19415 1.00008 0.97424 0.97142 1.20927 0.97032 0.93752 1.00740 1.20435 0.98611 0.98221 0.92641 1.19572 0.96430 0.95484 0.97087 1.18146 0.96901 0.97691 0.91321 1.20131 0.99837 0.95732 0.93220 1.41775 1.30325 1.23711 1.22328 1.22196 0.94617 0.88441 0.99018 1.19804 1.01061 1.00530 0.98227 1.24276 0.85987 0.99268 1.06182 1.86593 1.23909 1.38762 1.87862 0.94235 0.87750 0.74486 0.76501 1.23706 0.98424 1.01154 0.94182 0.91180 0.88592 0.91206 0.91460 0.91476 0.87829 0.88735 0.75559 0.90564 0.91047 0.74706 0.82296 0.83739 0.85487 0.72587 0.78189 0.89567 0.75907 1.21567 1.21725 0.86821 0.88766 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.46 10.29 71.98 0.74 1.21 16 2 C 0.05 0.09 6.19 71.98 0.45 0.54 16 3 O -0.36 -1.46 10.22 -51.37 -0.53 -1.99 16 4 C 0.47 2.32 7.49 71.24 0.53 2.86 16 5 O -0.54 -6.11 15.65 21.97 0.34 -5.76 16 6 C -0.10 0.15 4.19 -10.95 -0.05 0.10 16 7 H 0.15 -0.59 8.14 -2.38 -0.02 -0.61 16 8 C -0.11 0.08 6.80 31.12 0.21 0.29 16 9 C 0.12 -0.48 1.46 -10.27 -0.01 -0.49 16 10 O -0.54 2.79 13.40 -148.98 -2.00 0.80 16 11 C 0.11 -0.09 5.30 86.38 0.46 0.36 16 12 N -0.71 1.80 5.29 -466.22 -2.47 -0.66 16 13 C 0.56 3.04 7.76 86.71 0.67 3.71 16 14 O -0.58 -8.31 16.31 -3.99 -0.07 -8.37 16 15 C -0.14 -0.44 5.87 -20.08 -0.12 -0.56 16 16 C -0.11 0.22 9.46 22.28 0.21 0.43 16 17 C -0.08 -0.01 10.03 22.20 0.22 0.21 16 18 C -0.08 -0.28 6.35 -20.14 -0.13 -0.41 16 19 C 0.07 0.24 7.26 38.96 0.28 0.52 16 20 C -0.07 -0.35 9.61 22.63 0.22 -0.13 16 21 N -0.58 0.86 6.07 -187.71 -1.14 -0.28 16 22 C 0.09 -0.19 10.43 83.09 0.87 0.68 16 23 C -0.19 -0.21 5.60 -18.64 -0.10 -0.32 16 24 C -0.05 0.10 3.05 71.24 0.22 0.32 16 25 O -0.56 -0.62 12.86 -148.98 -1.92 -2.53 16 26 Si 0.77 -3.68 30.80 68.60 2.11 -1.57 16 27 C -0.14 0.70 7.03 31.18 0.22 0.92 16 28 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 29 H 0.10 -0.57 8.14 -2.39 -0.02 -0.59 16 30 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 31 H 0.07 0.14 8.13 -2.39 -0.02 0.13 16 32 H 0.07 0.15 8.13 -2.38 -0.02 0.13 16 33 H 0.10 0.17 7.39 -2.39 -0.02 0.15 16 34 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 35 H 0.39 -4.94 7.42 -74.06 -0.55 -5.49 16 36 H 0.08 0.11 7.98 -2.39 -0.02 0.09 16 37 H 0.07 0.16 8.14 -2.39 -0.02 0.14 16 38 H 0.41 -4.12 5.11 -92.71 -0.47 -4.59 16 39 H 0.16 -1.67 6.36 -2.91 -0.02 -1.69 16 40 H 0.14 -0.52 8.06 -2.91 -0.02 -0.54 16 41 H 0.13 0.76 7.62 -2.91 -0.02 0.74 16 42 H 0.43 -3.06 8.96 -92.71 -0.83 -3.89 16 43 H 0.20 -1.63 6.31 -2.91 -0.02 -1.65 16 44 H 0.09 -0.45 7.96 -2.38 -0.02 -0.47 16 45 H 0.39 -2.69 8.74 -74.06 -0.65 -3.34 16 46 H -0.29 -0.21 7.03 99.48 0.70 0.49 16 47 H -0.29 -0.06 7.11 99.48 0.71 0.65 16 48 H 0.11 -1.04 8.14 -2.39 -0.02 -1.06 16 49 H 0.09 -0.34 7.94 -2.39 -0.02 -0.36 16 Total: 0.00 -30.27 412.03 -2.19 -32.46 By element: Atomic # 1 Polarization: -20.92 SS G_CDS: -1.43 Total: -22.34 kcal Atomic # 6 Polarization: 5.36 SS G_CDS: 4.89 Total: 10.24 kcal Atomic # 7 Polarization: 2.67 SS G_CDS: -3.61 Total: -0.94 kcal Atomic # 8 Polarization: -13.70 SS G_CDS: -4.16 Total: -17.86 kcal Atomic # 14 Polarization: -3.68 SS G_CDS: 2.11 Total: -1.57 kcal Total: -30.27 -2.19 -32.46 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_12335838.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.822 kcal (2) G-P(sol) polarization free energy of solvation -30.272 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.094 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.190 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.462 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.284 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds