Wall clock time and date at job start Sun Mar 7 2021 07:02:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45198 * 109.47372 * 2 1 4 4 C 1.34230 * 117.00173 * 180.02562 * 3 2 1 5 5 O 1.20818 * 119.99983 * 0.27497 * 4 3 2 6 6 C 1.50706 * 119.99763 * 179.97438 * 4 3 2 7 7 H 1.08996 * 112.84772 * 48.80658 * 6 4 3 8 8 C 1.53781 * 113.61083 * 179.97438 * 6 4 3 9 9 C 1.53779 * 87.07868 * 139.98291 * 8 6 4 10 10 O 1.42896 * 113.61763 * 89.20025 * 9 8 6 11 11 C 1.53012 * 113.61472 * 220.01913 * 9 8 6 12 12 N 1.46491 * 109.47122 * 180.02562 * 11 9 8 13 13 C 1.34776 * 119.99944 * 180.02562 * 12 11 9 14 14 O 1.21546 * 120.00222 * 359.97438 * 13 12 11 15 15 C 1.47849 * 119.99848 * 179.97438 * 13 12 11 16 16 C 1.39541 * 120.14335 * 359.72496 * 15 13 12 17 17 C 1.38072 * 119.84237 * 179.71588 * 16 15 13 18 18 Br 1.89100 * 119.93914 * 180.27373 * 17 16 15 19 19 C 1.38425 * 120.12060 * 0.56036 * 17 16 15 20 20 C 1.38354 * 120.28986 * 359.71450 * 19 17 16 21 21 C 1.50695 * 119.92757 * 179.97438 * 20 19 17 22 22 O 1.42894 * 109.47397 * 245.02450 * 21 20 19 23 23 Si 1.86303 * 109.46963 * 5.02556 * 21 20 19 24 24 C 1.37940 * 120.15269 * 0.02562 * 20 19 17 25 25 C 1.53775 * 113.61422 * 277.49401 * 6 4 3 26 26 H 1.08997 * 109.46822 * 300.00275 * 1 2 3 27 27 H 1.08998 * 109.47020 * 59.99843 * 1 2 3 28 28 H 1.08999 * 109.47195 * 179.97438 * 1 2 3 29 29 H 1.09003 * 109.46945 * 240.00450 * 2 1 3 30 30 H 1.08998 * 109.47020 * 120.00157 * 2 1 3 31 31 H 1.08996 * 113.61907 * 254.53124 * 8 6 4 32 32 H 1.09003 * 113.61408 * 25.43496 * 8 6 4 33 33 H 0.96695 * 114.00513 * 179.97438 * 10 9 8 34 34 H 1.09001 * 109.46597 * 300.00560 * 11 9 8 35 35 H 1.09000 * 109.46821 * 59.99607 * 11 9 8 36 36 H 0.97005 * 120.00590 * 359.97438 * 12 11 9 37 37 H 1.08001 * 120.07443 * 359.97438 * 16 15 13 38 38 H 1.08009 * 119.85361 * 179.73650 * 19 17 16 39 39 H 1.09003 * 109.46977 * 125.01878 * 21 20 19 40 40 H 0.96695 * 114.00413 * 60.00115 * 22 21 20 41 41 H 1.48502 * 110.00053 * 58.67831 * 23 21 20 42 42 H 1.48501 * 109.99911 * 179.97438 * 23 21 20 43 43 H 1.08001 * 120.06687 * 179.97438 * 24 20 19 44 44 H 1.08996 * 113.61809 * 334.57079 * 25 6 4 45 45 H 1.09007 * 113.61519 * 105.47437 * 25 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5448 -0.0005 5 8 4.0807 0.5866 -0.0060 6 6 3.9208 2.9374 -0.0012 7 1 3.4715 3.5816 0.7547 8 6 5.4583 2.9680 -0.0011 9 6 5.3565 4.1420 -0.9892 10 8 5.2836 5.4200 -0.3542 11 6 6.3988 4.0932 -2.1084 12 7 6.2208 5.2479 -2.9920 13 6 7.0320 5.4141 -4.0554 14 8 7.9116 4.6062 -4.2810 15 6 6.8520 6.5792 -4.9476 16 6 5.8395 7.5056 -4.6948 17 6 5.6806 8.5945 -5.5286 18 35 4.3144 9.8557 -5.1841 19 6 6.5159 8.7616 -6.6198 20 6 7.5178 7.8433 -6.8787 21 6 8.4221 8.0329 -8.0691 22 8 8.2148 6.9680 -8.9992 23 14 8.0343 9.6594 -8.8907 24 6 7.6903 6.7540 -6.0502 25 6 3.9859 3.5765 -1.3983 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0276 -0.0005 29 1 1.8933 -0.5138 -0.8901 30 1 1.8933 -0.5138 0.8900 31 1 5.8895 3.2435 0.9613 32 1 5.9128 2.0748 -0.4296 33 1 5.2199 6.1624 -0.9705 34 1 7.3986 4.1184 -1.6749 35 1 6.2742 3.1742 -2.6810 36 1 5.5186 5.8926 -2.8124 37 1 5.1843 7.3732 -3.8464 38 1 6.3851 9.6128 -7.2717 39 1 9.4613 8.0308 -7.7400 40 1 7.3099 6.9095 -9.3348 41 1 8.2154 10.7724 -7.9245 42 1 8.9199 9.8586 -10.0661 43 1 8.4727 6.0378 -6.2538 44 1 4.0377 2.8497 -2.2089 45 1 3.2287 4.3431 -1.5636 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_12335870.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:02:37 Heat of formation + Delta-G solvation = -138.923268 kcal Electronic energy + Delta-G solvation = -30501.810655 eV Core-core repulsion = 25919.503340 eV Total energy + Delta-G solvation = -4582.307315 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.060 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.19624 -41.59122 -40.57935 -39.77251 -37.78205 -37.68535 -36.11551 -35.49893 -33.61531 -33.20176 -32.67209 -30.45522 -29.75630 -27.10672 -27.00070 -26.56874 -24.83481 -23.69365 -22.83471 -21.95593 -21.67251 -20.79272 -19.59505 -18.83863 -18.23715 -17.82219 -17.70964 -17.49155 -17.38254 -17.09788 -16.67571 -16.43111 -16.21851 -16.11629 -15.65993 -15.28140 -15.08873 -14.96042 -14.79887 -14.61628 -14.30670 -14.23546 -14.02774 -13.80593 -13.53348 -13.29381 -13.28082 -13.03070 -12.98552 -12.79339 -12.57257 -12.29253 -12.22883 -11.98217 -11.93568 -11.79299 -11.58642 -11.54580 -11.41441 -11.22686 -10.94673 -10.58107 -10.45573 -10.17989 -9.90872 -5.05745 -0.53193 -0.16282 0.44551 1.03842 1.21057 1.48140 1.58651 1.59751 1.81062 1.94806 2.44478 2.82418 3.08883 3.25556 3.26507 3.39033 3.42705 3.47504 3.55218 3.79662 3.86488 3.88895 3.95171 3.96076 4.02638 4.19343 4.19838 4.27659 4.29923 4.30370 4.47614 4.57531 4.62369 4.66775 4.75205 4.79202 4.84974 4.87845 4.89380 4.91455 5.06834 5.08721 5.10911 5.12708 5.36700 5.41102 6.20167 6.58605 6.62958 6.71687 6.94274 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.539 6.539 6 C -0.101 4.101 7 H 0.145 0.855 8 C -0.108 4.108 9 C 0.114 3.886 10 O -0.537 6.537 11 C 0.106 3.894 12 N -0.708 5.708 13 C 0.563 3.437 14 O -0.570 6.570 15 C -0.136 4.136 16 C -0.042 4.042 17 C -0.099 4.099 18 Br -0.025 7.025 19 C -0.059 4.059 20 C -0.117 4.117 21 C -0.075 4.075 22 O -0.553 6.553 23 Si 0.771 3.229 24 C -0.031 4.031 25 C -0.136 4.136 26 H 0.069 0.931 27 H 0.070 0.930 28 H 0.095 0.905 29 H 0.068 0.932 30 H 0.066 0.934 31 H 0.093 0.907 32 H 0.104 0.896 33 H 0.392 0.608 34 H 0.072 0.928 35 H 0.080 0.920 36 H 0.413 0.587 37 H 0.167 0.833 38 H 0.158 0.842 39 H 0.111 0.889 40 H 0.397 0.603 41 H -0.277 1.277 42 H -0.295 1.295 43 H 0.129 0.871 44 H 0.096 0.904 45 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.968 4.556 -0.682 9.204 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.314 3.686 5 O -0.429 6.429 6 C -0.120 4.120 7 H 0.163 0.837 8 C -0.146 4.146 9 C 0.072 3.928 10 O -0.345 6.345 11 C -0.018 4.018 12 N -0.363 5.363 13 C 0.351 3.649 14 O -0.450 6.450 15 C -0.140 4.140 16 C -0.062 4.062 17 C -0.178 4.178 18 Br 0.060 6.940 19 C -0.078 4.078 20 C -0.118 4.118 21 C -0.185 4.185 22 O -0.361 6.361 23 Si 0.676 3.324 24 C -0.050 4.050 25 C -0.174 4.174 26 H 0.088 0.912 27 H 0.089 0.911 28 H 0.114 0.886 29 H 0.086 0.914 30 H 0.085 0.915 31 H 0.112 0.888 32 H 0.122 0.878 33 H 0.243 0.757 34 H 0.091 0.909 35 H 0.098 0.902 36 H 0.252 0.748 37 H 0.184 0.816 38 H 0.175 0.825 39 H 0.129 0.871 40 H 0.247 0.753 41 H -0.203 1.203 42 H -0.223 1.223 43 H 0.147 0.853 44 H 0.114 0.886 45 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -6.751 4.447 -0.255 8.088 hybrid contribution 0.735 -0.588 0.035 0.942 sum -6.016 3.859 -0.220 7.151 Atomic orbital electron populations 1.21824 0.90625 1.04264 1.03794 1.23259 0.96991 0.79400 1.02433 1.86526 1.24268 1.33426 1.83378 1.24089 0.80545 0.92995 0.70979 1.90671 1.61172 1.44249 1.46811 1.22532 0.96898 0.89661 1.02889 0.83725 1.23077 0.93417 0.96938 1.01159 1.22106 0.93437 0.85421 0.91805 1.86600 1.96215 1.14608 1.37035 1.21934 0.99952 0.89391 0.90516 1.45597 1.35542 1.27994 1.27127 1.18317 0.80952 0.84867 0.80786 1.90827 1.34771 1.46004 1.73380 1.19807 0.99555 0.96627 0.97983 1.21474 0.95483 0.90792 0.98476 1.21751 0.98858 0.97539 0.99663 1.96880 1.46733 1.54953 1.95388 1.21385 0.92384 0.98385 0.95655 1.20316 0.97830 0.95281 0.98389 1.25247 1.00688 1.02897 0.89662 1.86516 1.36657 1.52456 1.60477 0.93910 0.88593 0.72199 0.77712 1.21262 0.96677 0.95941 0.91135 1.23682 0.98338 1.01176 0.94176 0.91243 0.91121 0.88610 0.91403 0.91539 0.88832 0.87757 0.75704 0.90926 0.90161 0.74791 0.81560 0.82499 0.87118 0.75266 1.20316 1.22282 0.85347 0.88560 0.86793 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.58 10.29 71.98 0.74 1.32 16 2 C 0.05 0.05 6.19 71.98 0.45 0.49 16 3 O -0.36 -1.12 10.22 -51.41 -0.53 -1.65 16 4 C 0.47 1.85 7.48 71.24 0.53 2.38 16 5 O -0.54 -5.60 15.65 21.99 0.34 -5.26 16 6 C -0.10 0.26 4.20 -11.01 -0.05 0.21 16 7 H 0.15 -0.72 8.14 -2.39 -0.02 -0.74 16 8 C -0.11 0.21 6.80 31.12 0.21 0.42 16 9 C 0.11 -0.65 1.49 -10.25 -0.02 -0.66 16 10 O -0.54 3.52 13.41 -148.98 -2.00 1.53 16 11 C 0.11 -0.31 5.32 86.38 0.46 0.15 16 12 N -0.71 3.67 5.29 -465.98 -2.46 1.21 16 13 C 0.56 1.27 7.77 86.79 0.67 1.95 16 14 O -0.57 -6.77 16.35 -3.86 -0.06 -6.83 16 15 C -0.14 0.14 5.87 -20.09 -0.12 0.02 16 16 C -0.04 0.27 9.28 22.54 0.21 0.47 16 17 C -0.10 0.51 6.22 22.28 0.14 0.64 16 18 Br -0.03 0.14 33.69 -20.37 -0.69 -0.55 16 19 C -0.06 0.28 8.40 22.34 0.19 0.47 16 20 C -0.12 0.27 5.34 -19.91 -0.11 0.16 16 21 C -0.08 0.17 2.80 71.23 0.20 0.37 16 22 O -0.55 0.47 12.83 -148.98 -1.91 -1.44 16 23 Si 0.77 -3.32 29.79 68.60 2.04 -1.27 16 24 C -0.03 -0.04 9.23 22.53 0.21 0.17 16 25 C -0.14 0.91 7.02 31.13 0.22 1.13 16 26 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 27 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 28 H 0.10 -0.64 8.14 -2.39 -0.02 -0.65 16 29 H 0.07 0.09 8.13 -2.39 -0.02 0.07 16 30 H 0.07 0.11 8.14 -2.39 -0.02 0.09 16 31 H 0.09 -0.16 8.14 -2.39 -0.02 -0.18 16 32 H 0.10 0.04 7.39 -2.39 -0.02 0.03 16 33 H 0.39 -5.49 7.30 -74.06 -0.54 -6.03 16 34 H 0.07 0.03 8.14 -2.39 -0.02 0.01 16 35 H 0.08 -0.07 7.94 -2.39 -0.02 -0.09 16 36 H 0.41 -5.20 5.07 -92.70 -0.47 -5.67 16 37 H 0.17 -2.19 6.40 -2.91 -0.02 -2.21 16 38 H 0.16 -1.32 4.89 -2.91 -0.01 -1.33 16 39 H 0.11 -0.07 7.96 -2.39 -0.02 -0.09 16 40 H 0.40 -3.75 8.70 -74.06 -0.64 -4.39 16 41 H -0.28 0.07 7.11 99.48 0.71 0.77 16 42 H -0.30 -1.07 7.11 99.48 0.71 -0.36 16 43 H 0.13 0.64 7.65 -2.91 -0.02 0.62 16 44 H 0.10 -0.53 7.92 -2.39 -0.02 -0.55 16 45 H 0.11 -1.22 8.14 -2.38 -0.02 -1.24 16 Total: 0.00 -25.26 399.62 -1.86 -27.12 By element: Atomic # 1 Polarization: -22.00 SS G_CDS: -0.54 Total: -22.54 kcal Atomic # 6 Polarization: 5.75 SS G_CDS: 3.94 Total: 9.69 kcal Atomic # 7 Polarization: 3.67 SS G_CDS: -2.46 Total: 1.21 kcal Atomic # 8 Polarization: -9.50 SS G_CDS: -4.15 Total: -13.65 kcal Atomic # 14 Polarization: -3.32 SS G_CDS: 2.04 Total: -1.27 kcal Atomic # 35 Polarization: 0.14 SS G_CDS: -0.69 Total: -0.55 kcal Total: -25.26 -1.86 -27.12 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_12335870.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.801 kcal (2) G-P(sol) polarization free energy of solvation -25.258 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.059 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.864 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.123 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.923 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds