Wall clock time and date at job start Sun Mar 7 2021 07:02:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45191 * 109.46999 * 2 1 4 4 C 1.34234 * 117.00006 * 179.97438 * 3 2 1 5 5 O 1.20817 * 119.99793 * 0.02562 * 4 3 2 6 6 C 1.50704 * 120.00031 * 180.02562 * 4 3 2 7 7 H 1.08996 * 112.84814 * 311.19757 * 6 4 3 8 8 C 1.53781 * 113.61535 * 82.50333 * 6 4 3 9 9 C 1.53777 * 87.08093 * 139.97697 * 8 6 4 10 10 O 1.42903 * 113.60728 * 89.12047 * 9 8 6 11 11 C 1.53000 * 113.69269 * 220.00844 * 9 8 6 12 12 N 1.46509 * 109.46687 * 284.06821 * 11 9 8 13 13 C 1.34779 * 119.99062 * 180.02562 * 12 11 9 14 14 O 1.21688 * 120.00535 * 359.97438 * 13 12 11 15 15 C 1.46429 * 119.99158 * 180.02562 * 13 12 11 16 16 C 1.34813 * 119.99770 * 179.97438 * 15 13 12 17 17 C 1.47205 * 120.00018 * 179.97438 * 16 15 13 18 18 C 1.39832 * 120.16981 * 359.72503 * 17 16 15 19 19 C 1.37897 * 119.82535 * 179.78846 * 18 17 16 20 20 C 1.38403 * 120.16991 * 0.46524 * 19 18 17 21 21 C 1.50703 * 119.82598 * 179.76370 * 20 19 18 22 22 O 1.42903 * 109.46563 * 120.02465 * 21 20 19 23 23 Si 1.86297 * 109.47201 * 0.02562 * 21 20 19 24 24 C 1.38398 * 120.34371 * 359.78782 * 20 19 18 25 25 C 1.37885 * 120.17193 * 359.97438 * 24 20 19 26 26 C 1.53774 * 87.08184 * 334.56999 * 9 8 6 27 27 H 1.09000 * 109.47592 * 60.00217 * 1 2 3 28 28 H 1.09006 * 109.46986 * 179.97438 * 1 2 3 29 29 H 1.08995 * 109.47110 * 299.99527 * 1 2 3 30 30 H 1.09004 * 109.46977 * 240.00272 * 2 1 3 31 31 H 1.08996 * 109.47151 * 120.00370 * 2 1 3 32 32 H 1.09007 * 113.61076 * 25.43353 * 8 6 4 33 33 H 1.08997 * 113.61328 * 254.53601 * 8 6 4 34 34 H 0.96700 * 114.00311 * 82.50322 * 10 9 8 35 35 H 1.08991 * 109.47106 * 44.06433 * 11 9 8 36 36 H 1.08994 * 109.46854 * 164.06937 * 11 9 8 37 37 H 0.96996 * 120.00320 * 359.97438 * 12 11 9 38 38 H 1.07999 * 120.00805 * 359.97438 * 15 13 12 39 39 H 1.08002 * 120.00043 * 0.02562 * 16 15 13 40 40 H 1.07994 * 120.08983 * 0.02562 * 18 17 16 41 41 H 1.08002 * 119.91287 * 180.23716 * 19 18 17 42 42 H 1.08996 * 109.47028 * 240.02278 * 21 20 19 43 43 H 0.96701 * 113.99967 * 299.99437 * 22 21 20 44 44 H 1.48499 * 110.00115 * 179.97438 * 23 21 20 45 45 H 1.48499 * 110.00240 * 301.31771 * 23 21 20 46 46 H 1.08003 * 119.91514 * 179.97438 * 24 20 19 47 47 H 1.08008 * 120.08965 * 179.97438 * 25 24 20 48 48 H 1.09002 * 113.61399 * 139.97742 * 26 9 8 49 49 H 1.09001 * 113.61507 * 270.79534 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9207 2.9374 0.0012 7 1 3.4714 3.5816 -0.7546 8 6 3.9858 3.5765 1.3983 9 6 5.3561 4.1421 0.9896 10 8 5.2814 5.4200 0.3544 11 6 6.3992 4.0946 2.1079 12 7 6.1245 5.1582 3.0774 13 6 6.9199 5.3096 4.1548 14 8 7.8659 4.5627 4.3226 15 6 6.6451 6.3722 5.1240 16 6 7.4404 6.5234 6.2021 17 6 7.1644 7.5920 7.1761 18 6 6.0818 8.4559 6.9838 19 6 5.8273 9.4518 7.9030 20 6 6.6457 9.6035 9.0088 21 6 6.3635 10.6978 10.0057 22 8 6.1238 10.1209 11.2910 23 14 4.8609 11.6575 9.4657 24 6 7.7223 8.7558 9.2033 25 6 7.9869 7.7521 8.2957 26 6 5.4582 2.9681 0.0017 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5137 0.8900 30 1 1.8933 -0.5138 -0.8900 31 1 1.8933 -0.5139 0.8899 32 1 4.0376 2.8496 2.2090 33 1 3.2286 4.3429 1.5636 34 1 5.2170 6.1625 0.9706 35 1 6.3526 3.1269 2.6073 36 1 7.3931 4.2372 1.6839 37 1 5.3707 5.7537 2.9434 38 1 5.8053 7.0349 4.9754 39 1 8.2804 5.8611 6.3506 40 1 5.4444 8.3411 6.1196 41 1 4.9892 10.1173 7.7579 42 1 7.2215 11.3677 10.0625 43 1 5.3726 9.5124 11.3150 44 1 4.5717 12.7394 10.4409 45 1 5.0855 12.2360 8.1165 46 1 8.3567 8.8807 10.0684 47 1 8.8277 7.0916 8.4486 48 1 5.8897 3.2435 -0.9606 49 1 5.9139 2.0754 0.4301 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_12360594.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:02:48 Heat of formation + Delta-G solvation = -129.578152 kcal Electronic energy + Delta-G solvation = -30696.666569 eV Core-core repulsion = 26170.818732 eV Total energy + Delta-G solvation = -4525.847837 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.165 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.12764 -41.04978 -40.68104 -40.01587 -37.86867 -37.64429 -36.03312 -35.46072 -35.10516 -32.72491 -32.35106 -31.50821 -29.77981 -27.39121 -27.07476 -26.17311 -24.28218 -23.99364 -23.51770 -22.09758 -21.90843 -20.86781 -20.72365 -19.11745 -18.77108 -18.34988 -17.84603 -17.68087 -17.40981 -17.13507 -16.83746 -16.68542 -16.39040 -16.23425 -16.10418 -15.75024 -15.28835 -15.13735 -15.02610 -14.75670 -14.67760 -14.44285 -14.25014 -14.19460 -13.92211 -13.88209 -13.62642 -13.38682 -13.28997 -13.08545 -12.98920 -12.82115 -12.62644 -12.37416 -12.32580 -12.08664 -11.81670 -11.77831 -11.52989 -11.45460 -11.42332 -11.06264 -10.97938 -10.52628 -10.27584 -10.10609 -9.34837 -5.12715 -0.64131 0.27082 0.82612 1.15642 1.19856 1.54201 1.61921 1.89339 1.97291 2.20565 2.66715 2.71981 3.01461 3.24733 3.32445 3.34816 3.38092 3.47392 3.54969 3.69799 3.77230 3.84843 3.93268 3.98759 4.03239 4.06698 4.09871 4.21569 4.26109 4.27611 4.33338 4.41631 4.44892 4.47721 4.63422 4.69226 4.71546 4.72857 4.78197 4.81680 4.84791 4.96690 4.98881 5.00147 5.01602 5.18598 5.28015 5.37134 5.45864 5.49693 5.77470 6.25614 6.33716 6.47446 6.74436 7.11807 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.470 3.530 5 O -0.504 6.504 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.145 4.145 9 C 0.097 3.903 10 O -0.531 6.531 11 C 0.104 3.896 12 N -0.729 5.729 13 C 0.550 3.450 14 O -0.538 6.538 15 C -0.217 4.217 16 C -0.011 4.011 17 C -0.075 4.075 18 C -0.095 4.095 19 C -0.120 4.120 20 C -0.107 4.107 21 C -0.072 4.072 22 O -0.539 6.539 23 Si 0.689 3.311 24 C -0.095 4.095 25 C -0.091 4.091 26 C -0.101 4.101 27 H 0.067 0.933 28 H 0.081 0.919 29 H 0.067 0.933 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.098 0.902 33 H 0.091 0.909 34 H 0.379 0.621 35 H 0.085 0.915 36 H 0.083 0.917 37 H 0.398 0.602 38 H 0.131 0.869 39 H 0.138 0.862 40 H 0.132 0.868 41 H 0.130 0.870 42 H 0.115 0.885 43 H 0.380 0.620 44 H -0.254 1.254 45 H -0.257 1.257 46 H 0.131 0.869 47 H 0.132 0.868 48 H 0.094 0.906 49 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.187 1.979 0.303 6.503 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.392 6.392 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.182 4.182 9 C 0.056 3.944 10 O -0.337 6.337 11 C -0.020 4.020 12 N -0.382 5.382 13 C 0.340 3.660 14 O -0.416 6.416 15 C -0.238 4.238 16 C -0.031 4.031 17 C -0.075 4.075 18 C -0.112 4.112 19 C -0.137 4.137 20 C -0.107 4.107 21 C -0.182 4.182 22 O -0.344 6.344 23 Si 0.591 3.409 24 C -0.113 4.113 25 C -0.109 4.109 26 C -0.138 4.138 27 H 0.086 0.914 28 H 0.100 0.900 29 H 0.086 0.914 30 H 0.089 0.911 31 H 0.089 0.911 32 H 0.117 0.883 33 H 0.109 0.891 34 H 0.227 0.773 35 H 0.103 0.897 36 H 0.101 0.899 37 H 0.233 0.767 38 H 0.149 0.851 39 H 0.156 0.844 40 H 0.150 0.850 41 H 0.148 0.852 42 H 0.133 0.867 43 H 0.227 0.773 44 H -0.179 1.179 45 H -0.182 1.182 46 H 0.149 0.851 47 H 0.150 0.850 48 H 0.113 0.887 49 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -5.088 1.892 -0.222 5.433 hybrid contribution 0.157 0.346 0.282 0.473 sum -4.931 2.238 0.060 5.415 Atomic orbital electron populations 1.21821 0.92310 1.03278 1.03651 1.23093 0.95632 0.79860 1.02772 1.86517 1.24367 1.32751 1.83675 1.23528 0.80702 0.92304 0.72163 1.90687 1.60516 1.42916 1.45064 1.22416 0.97267 0.91034 1.01400 0.85020 1.23654 0.98247 1.01005 0.95335 1.22365 0.93684 0.85475 0.92905 1.86595 1.96258 1.14395 1.36417 1.21933 0.99401 0.92002 0.88691 1.45755 1.32389 1.35187 1.24879 1.18321 0.82057 0.84453 0.81213 1.90859 1.29359 1.45692 1.75684 1.22844 1.03284 1.00750 0.96917 1.22430 0.96742 0.93210 0.90728 1.19060 0.96561 0.96294 0.95582 1.21348 0.96651 0.94246 0.98993 1.20962 0.99390 0.98735 0.94646 1.20541 0.96107 0.97888 0.96172 1.25112 1.09650 0.98137 0.85332 1.86518 1.55003 1.64893 1.28002 0.94723 0.84065 0.82613 0.79471 1.20997 0.96774 0.94424 0.99087 1.21475 0.98685 0.97621 0.93124 1.23052 0.93236 0.96664 1.00895 0.91350 0.89991 0.91380 0.91059 0.91106 0.88344 0.89052 0.77271 0.89727 0.89880 0.76704 0.85090 0.84429 0.85046 0.85239 0.86723 0.77288 1.17886 1.18245 0.85117 0.85026 0.88735 0.86723 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.27 10.29 37.16 0.38 0.65 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.54 10.22 -39.27 -0.40 -0.94 16 4 C 0.47 0.84 7.48 36.01 0.27 1.11 16 5 O -0.50 -2.32 15.65 -18.74 -0.29 -2.61 16 6 C -0.10 0.10 4.20 -90.96 -0.38 -0.28 16 7 H 0.13 -0.23 8.14 -51.93 -0.42 -0.65 16 8 C -0.14 0.38 7.02 -25.92 -0.18 0.20 16 9 C 0.10 -0.22 1.39 -89.81 -0.12 -0.35 16 10 O -0.53 1.14 13.41 -35.23 -0.47 0.67 16 11 C 0.10 -0.13 5.24 -4.04 -0.02 -0.15 16 12 N -0.73 1.68 5.31 -61.70 -0.33 1.35 16 13 C 0.55 0.44 7.74 -12.96 -0.10 0.34 16 14 O -0.54 -2.83 16.23 5.20 0.08 -2.74 16 15 C -0.22 0.31 9.41 -37.50 -0.35 -0.04 16 16 C -0.01 0.01 9.46 -37.16 -0.35 -0.35 16 17 C -0.07 0.05 5.87 -105.06 -0.62 -0.56 16 18 C -0.09 0.17 9.41 -39.11 -0.37 -0.20 16 19 C -0.12 0.21 8.65 -39.65 -0.34 -0.13 16 20 C -0.11 0.09 5.40 -104.50 -0.56 -0.47 16 21 C -0.07 0.08 2.82 36.01 0.10 0.18 16 22 O -0.54 0.27 12.76 -35.23 -0.45 -0.18 16 23 Si 0.69 -1.34 29.77 -169.99 -5.06 -6.40 16 24 C -0.09 0.04 9.59 -39.65 -0.38 -0.34 16 25 C -0.09 0.05 9.80 -39.11 -0.38 -0.33 16 26 C -0.10 0.09 6.79 -25.93 -0.18 -0.08 16 27 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 28 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 29 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 30 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 31 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 32 H 0.10 -0.22 8.01 -51.92 -0.42 -0.64 16 33 H 0.09 -0.36 8.14 -51.93 -0.42 -0.78 16 34 H 0.38 -2.11 7.70 45.56 0.35 -1.76 16 35 H 0.08 -0.03 8.09 -51.93 -0.42 -0.45 16 36 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 37 H 0.40 -2.23 7.40 -40.82 -0.30 -2.53 16 38 H 0.13 -0.59 6.07 -52.49 -0.32 -0.91 16 39 H 0.14 0.04 7.52 -52.49 -0.39 -0.35 16 40 H 0.13 -0.55 6.17 -52.49 -0.32 -0.88 16 41 H 0.13 -0.47 4.85 -52.49 -0.25 -0.72 16 42 H 0.12 -0.07 7.96 -51.93 -0.41 -0.48 16 43 H 0.38 -1.65 8.70 45.56 0.40 -1.26 16 44 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 45 H -0.26 -0.07 7.11 56.52 0.40 0.34 16 46 H 0.13 -0.11 8.06 -52.48 -0.42 -0.53 16 47 H 0.13 -0.25 8.06 -52.48 -0.42 -0.67 16 48 H 0.09 -0.08 8.14 -51.93 -0.42 -0.50 16 49 H 0.11 -0.03 7.40 -51.93 -0.38 -0.42 16 LS Contribution 413.56 15.07 6.23 6.23 Total: 0.00 -10.95 413.56 -10.38 -21.32 By element: Atomic # 1 Polarization: -9.82 SS G_CDS: -6.33 Total: -16.15 kcal Atomic # 6 Polarization: 2.80 SS G_CDS: -3.36 Total: -0.56 kcal Atomic # 7 Polarization: 1.68 SS G_CDS: -0.33 Total: 1.35 kcal Atomic # 8 Polarization: -4.27 SS G_CDS: -1.53 Total: -5.80 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: -5.06 Total: -6.40 kcal Total LS contribution 6.23 Total: 6.23 kcal Total: -10.95 -10.38 -21.32 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_12360594.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.254 kcal (2) G-P(sol) polarization free energy of solvation -10.946 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.199 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.379 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.324 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.578 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds