Wall clock time and date at job start Sun Mar 7 2021 07:02:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45191 * 109.46999 * 2 1 4 4 C 1.34234 * 117.00006 * 179.97438 * 3 2 1 5 5 O 1.20817 * 119.99793 * 0.02562 * 4 3 2 6 6 C 1.50704 * 120.00031 * 180.02562 * 4 3 2 7 7 H 1.08996 * 112.84814 * 311.19757 * 6 4 3 8 8 C 1.53781 * 113.61535 * 82.50333 * 6 4 3 9 9 C 1.53777 * 87.08093 * 139.97697 * 8 6 4 10 10 O 1.42903 * 113.60728 * 89.12047 * 9 8 6 11 11 C 1.53000 * 113.69269 * 220.00844 * 9 8 6 12 12 N 1.46509 * 109.46687 * 284.06821 * 11 9 8 13 13 C 1.34779 * 119.99062 * 180.02562 * 12 11 9 14 14 O 1.21688 * 120.00535 * 359.97438 * 13 12 11 15 15 C 1.46429 * 119.99158 * 180.02562 * 13 12 11 16 16 C 1.34813 * 119.99770 * 179.97438 * 15 13 12 17 17 C 1.47205 * 120.00018 * 179.97438 * 16 15 13 18 18 C 1.39832 * 120.16981 * 359.72503 * 17 16 15 19 19 C 1.37897 * 119.82535 * 179.78846 * 18 17 16 20 20 C 1.38403 * 120.16991 * 0.46524 * 19 18 17 21 21 C 1.50703 * 119.82598 * 179.76370 * 20 19 18 22 22 O 1.42903 * 109.46563 * 120.02465 * 21 20 19 23 23 Si 1.86297 * 109.47201 * 0.02562 * 21 20 19 24 24 C 1.38398 * 120.34371 * 359.78782 * 20 19 18 25 25 C 1.37885 * 120.17193 * 359.97438 * 24 20 19 26 26 C 1.53774 * 87.08184 * 334.56999 * 9 8 6 27 27 H 1.09000 * 109.47592 * 60.00217 * 1 2 3 28 28 H 1.09006 * 109.46986 * 179.97438 * 1 2 3 29 29 H 1.08995 * 109.47110 * 299.99527 * 1 2 3 30 30 H 1.09004 * 109.46977 * 240.00272 * 2 1 3 31 31 H 1.08996 * 109.47151 * 120.00370 * 2 1 3 32 32 H 1.09007 * 113.61076 * 25.43353 * 8 6 4 33 33 H 1.08997 * 113.61328 * 254.53601 * 8 6 4 34 34 H 0.96700 * 114.00311 * 82.50322 * 10 9 8 35 35 H 1.08991 * 109.47106 * 44.06433 * 11 9 8 36 36 H 1.08994 * 109.46854 * 164.06937 * 11 9 8 37 37 H 0.96996 * 120.00320 * 359.97438 * 12 11 9 38 38 H 1.07999 * 120.00805 * 359.97438 * 15 13 12 39 39 H 1.08002 * 120.00043 * 0.02562 * 16 15 13 40 40 H 1.07994 * 120.08983 * 0.02562 * 18 17 16 41 41 H 1.08002 * 119.91287 * 180.23716 * 19 18 17 42 42 H 1.08996 * 109.47028 * 240.02278 * 21 20 19 43 43 H 0.96701 * 113.99967 * 299.99437 * 22 21 20 44 44 H 1.48499 * 110.00115 * 179.97438 * 23 21 20 45 45 H 1.48499 * 110.00240 * 301.31771 * 23 21 20 46 46 H 1.08003 * 119.91514 * 179.97438 * 24 20 19 47 47 H 1.08008 * 120.08965 * 179.97438 * 25 24 20 48 48 H 1.09002 * 113.61399 * 139.97742 * 26 9 8 49 49 H 1.09001 * 113.61507 * 270.79534 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9207 2.9374 0.0012 7 1 3.4714 3.5816 -0.7546 8 6 3.9858 3.5765 1.3983 9 6 5.3561 4.1421 0.9896 10 8 5.2814 5.4200 0.3544 11 6 6.3992 4.0946 2.1079 12 7 6.1245 5.1582 3.0774 13 6 6.9199 5.3096 4.1548 14 8 7.8659 4.5627 4.3226 15 6 6.6451 6.3722 5.1240 16 6 7.4404 6.5234 6.2021 17 6 7.1644 7.5920 7.1761 18 6 6.0818 8.4559 6.9838 19 6 5.8273 9.4518 7.9030 20 6 6.6457 9.6035 9.0088 21 6 6.3635 10.6978 10.0057 22 8 6.1238 10.1209 11.2910 23 14 4.8609 11.6575 9.4657 24 6 7.7223 8.7558 9.2033 25 6 7.9869 7.7521 8.2957 26 6 5.4582 2.9681 0.0017 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5137 0.8900 30 1 1.8933 -0.5138 -0.8900 31 1 1.8933 -0.5139 0.8899 32 1 4.0376 2.8496 2.2090 33 1 3.2286 4.3429 1.5636 34 1 5.2170 6.1625 0.9706 35 1 6.3526 3.1269 2.6073 36 1 7.3931 4.2372 1.6839 37 1 5.3707 5.7537 2.9434 38 1 5.8053 7.0349 4.9754 39 1 8.2804 5.8611 6.3506 40 1 5.4444 8.3411 6.1196 41 1 4.9892 10.1173 7.7579 42 1 7.2215 11.3677 10.0625 43 1 5.3726 9.5124 11.3150 44 1 4.5717 12.7394 10.4409 45 1 5.0855 12.2360 8.1165 46 1 8.3567 8.8807 10.0684 47 1 8.8277 7.0916 8.4486 48 1 5.8897 3.2435 -0.9606 49 1 5.9139 2.0754 0.4301 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_12360594.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:02:47 Heat of formation + Delta-G solvation = -131.918832 kcal Electronic energy + Delta-G solvation = -30696.768069 eV Core-core repulsion = 26170.818732 eV Total energy + Delta-G solvation = -4525.949337 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.165 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -42.14025 -41.07325 -40.58296 -40.02134 -37.80048 -37.74246 -35.97137 -35.39117 -35.06131 -32.68047 -32.22119 -31.41317 -29.71543 -27.31783 -26.94329 -26.13627 -24.17084 -23.90253 -23.46608 -22.04687 -21.90394 -20.78520 -20.64557 -19.07361 -18.78019 -18.28388 -17.83318 -17.70989 -17.36846 -17.06984 -16.78830 -16.59731 -16.33344 -16.14209 -16.03535 -15.64713 -15.26657 -15.08551 -14.96311 -14.75733 -14.53967 -14.44371 -14.18743 -14.15350 -13.79353 -13.77439 -13.50536 -13.28167 -13.25055 -13.02175 -12.97852 -12.77769 -12.56547 -12.27541 -12.25340 -12.02344 -11.76488 -11.68722 -11.58051 -11.47867 -11.35217 -11.10923 -10.90254 -10.43230 -10.26325 -9.97314 -9.23160 -4.98965 -0.54691 0.40744 0.88678 1.04173 1.32203 1.60506 1.64531 1.98652 2.04883 2.22173 2.82594 2.87072 3.11533 3.36680 3.43134 3.47030 3.51094 3.60867 3.69985 3.83186 3.90767 3.95581 3.95989 4.03158 4.17367 4.20919 4.22707 4.30623 4.32491 4.37197 4.45231 4.52335 4.58458 4.65435 4.69577 4.80627 4.85087 4.87376 4.88580 4.91119 4.98605 5.10046 5.11230 5.13375 5.16368 5.26341 5.39673 5.41386 5.49341 5.60816 5.91277 6.43843 6.63217 6.66201 6.76247 7.16101 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.101 4.101 7 H 0.145 0.855 8 C -0.134 4.134 9 C 0.116 3.884 10 O -0.539 6.539 11 C 0.107 3.893 12 N -0.709 5.709 13 C 0.543 3.457 14 O -0.592 6.592 15 C -0.206 4.206 16 C -0.022 4.022 17 C -0.081 4.081 18 C -0.092 4.092 19 C -0.122 4.122 20 C -0.112 4.112 21 C -0.081 4.081 22 O -0.557 6.557 23 Si 0.783 3.217 24 C -0.109 4.109 25 C -0.104 4.104 26 C -0.110 4.110 27 H 0.068 0.932 28 H 0.095 0.905 29 H 0.070 0.930 30 H 0.066 0.934 31 H 0.067 0.933 32 H 0.094 0.906 33 H 0.115 0.885 34 H 0.395 0.605 35 H 0.073 0.927 36 H 0.067 0.933 37 H 0.419 0.581 38 H 0.170 0.830 39 H 0.119 0.881 40 H 0.162 0.838 41 H 0.151 0.849 42 H 0.104 0.896 43 H 0.396 0.604 44 H -0.305 1.305 45 H -0.280 1.280 46 H 0.126 0.874 47 H 0.134 0.866 48 H 0.092 0.908 49 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.472 3.211 -0.319 9.066 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.314 3.686 5 O -0.430 6.430 6 C -0.120 4.120 7 H 0.163 0.837 8 C -0.171 4.171 9 C 0.074 3.926 10 O -0.348 6.348 11 C -0.018 4.018 12 N -0.362 5.362 13 C 0.334 3.666 14 O -0.474 6.474 15 C -0.226 4.226 16 C -0.042 4.042 17 C -0.082 4.082 18 C -0.109 4.109 19 C -0.139 4.139 20 C -0.113 4.113 21 C -0.190 4.190 22 O -0.365 6.365 23 Si 0.689 3.311 24 C -0.127 4.127 25 C -0.122 4.122 26 C -0.148 4.148 27 H 0.088 0.912 28 H 0.114 0.886 29 H 0.089 0.911 30 H 0.084 0.916 31 H 0.086 0.914 32 H 0.113 0.887 33 H 0.134 0.866 34 H 0.246 0.754 35 H 0.091 0.909 36 H 0.085 0.915 37 H 0.257 0.743 38 H 0.188 0.812 39 H 0.137 0.863 40 H 0.180 0.820 41 H 0.168 0.832 42 H 0.122 0.878 43 H 0.246 0.754 44 H -0.233 1.233 45 H -0.207 1.207 46 H 0.144 0.856 47 H 0.152 0.848 48 H 0.110 0.890 49 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -7.420 3.127 -0.856 8.097 hybrid contribution 0.889 -0.037 0.475 1.009 sum -6.530 3.090 -0.381 7.235 Atomic orbital electron populations 1.21824 0.90582 1.04266 1.03813 1.23259 0.97018 0.79406 1.02415 1.86526 1.24237 1.33418 1.83380 1.24101 0.80549 0.93003 0.70958 1.90670 1.61194 1.44274 1.46836 1.22537 0.96798 0.89643 1.02991 0.83718 1.23634 0.98345 1.01138 0.94022 1.22053 0.93473 0.85332 0.91739 1.86577 1.96202 1.14723 1.37265 1.21819 0.99107 0.91822 0.89031 1.45567 1.32264 1.34786 1.23582 1.18776 0.81517 0.84380 0.81933 1.90841 1.31784 1.47800 1.76985 1.22991 1.03923 1.00138 0.95514 1.22362 0.96798 0.93428 0.91566 1.19110 0.97145 0.96568 0.95337 1.21679 0.96229 0.93322 0.99718 1.21202 0.99645 0.99005 0.94071 1.20619 0.96229 0.97757 0.96669 1.25292 1.10166 0.98296 0.85281 1.86477 1.56170 1.65492 1.28383 0.93682 0.81783 0.79804 0.75822 1.21049 0.97360 0.95024 0.99260 1.21605 0.99189 0.97863 0.93552 1.23074 0.93482 0.97053 1.01194 0.91245 0.88620 0.91070 0.91577 0.91414 0.88732 0.86643 0.75382 0.90855 0.91490 0.74328 0.81234 0.86287 0.82050 0.83169 0.87824 0.75439 1.23304 1.20688 0.85599 0.84835 0.88979 0.87944 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.59 10.29 71.98 0.74 1.34 16 2 C 0.05 0.05 6.19 71.98 0.45 0.49 16 3 O -0.36 -1.13 10.22 -51.46 -0.53 -1.65 16 4 C 0.47 1.94 7.48 71.24 0.53 2.47 16 5 O -0.54 -5.77 15.65 21.99 0.34 -5.43 16 6 C -0.10 0.23 4.20 -11.01 -0.05 0.19 16 7 H 0.15 -0.69 8.14 -2.39 -0.02 -0.71 16 8 C -0.13 0.89 7.02 31.12 0.22 1.11 16 9 C 0.12 -0.62 1.39 -10.27 -0.01 -0.63 16 10 O -0.54 3.35 13.41 -148.98 -2.00 1.35 16 11 C 0.11 -0.25 5.24 86.38 0.45 0.20 16 12 N -0.71 4.05 5.31 -467.34 -2.48 1.56 16 13 C 0.54 0.76 7.74 86.38 0.67 1.43 16 14 O -0.59 -7.17 16.23 -4.31 -0.07 -7.24 16 15 C -0.21 0.87 9.41 23.62 0.22 1.09 16 16 C -0.02 0.02 9.46 23.84 0.23 0.24 16 17 C -0.08 0.15 5.87 -20.15 -0.12 0.04 16 18 C -0.09 0.53 9.41 22.57 0.21 0.75 16 19 C -0.12 0.64 8.65 22.23 0.19 0.84 16 20 C -0.11 0.23 5.40 -19.79 -0.11 0.12 16 21 C -0.08 0.17 2.82 71.24 0.20 0.37 16 22 O -0.56 0.46 12.76 -148.98 -1.90 -1.45 16 23 Si 0.78 -3.54 29.77 68.60 2.04 -1.50 16 24 C -0.11 0.00 9.59 22.22 0.21 0.22 16 25 C -0.10 0.04 9.80 22.57 0.22 0.26 16 26 C -0.11 0.15 6.79 31.12 0.21 0.36 16 27 H 0.07 -0.28 8.14 -2.39 -0.02 -0.29 16 28 H 0.10 -0.65 8.14 -2.38 -0.02 -0.66 16 29 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 30 H 0.07 0.11 8.13 -2.38 -0.02 0.09 16 31 H 0.07 0.09 8.13 -2.39 -0.02 0.07 16 32 H 0.09 -0.50 8.01 -2.38 -0.02 -0.52 16 33 H 0.12 -1.28 8.14 -2.39 -0.02 -1.29 16 34 H 0.40 -5.49 7.70 -74.06 -0.57 -6.06 16 35 H 0.07 0.03 8.09 -2.39 -0.02 0.01 16 36 H 0.07 0.10 8.14 -2.39 -0.02 0.08 16 37 H 0.42 -5.84 7.40 -92.71 -0.69 -6.52 16 38 H 0.17 -2.17 6.07 -2.91 -0.02 -2.19 16 39 H 0.12 0.31 7.52 -2.91 -0.02 0.29 16 40 H 0.16 -2.02 6.17 -2.91 -0.02 -2.04 16 41 H 0.15 -1.49 4.85 -2.91 -0.01 -1.50 16 42 H 0.10 -0.03 7.96 -2.39 -0.02 -0.05 16 43 H 0.40 -3.57 8.70 -74.06 -0.64 -4.22 16 44 H -0.30 -1.19 7.11 99.48 0.71 -0.48 16 45 H -0.28 0.20 7.11 99.48 0.71 0.91 16 46 H 0.13 0.00 8.06 -2.91 -0.02 -0.02 16 47 H 0.13 -0.27 8.06 -2.91 -0.02 -0.29 16 48 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 49 H 0.10 0.12 7.40 -2.39 -0.02 0.11 16 Total: 0.00 -28.24 413.56 -0.97 -29.21 By element: Atomic # 1 Polarization: -24.88 SS G_CDS: -0.85 Total: -25.74 kcal Atomic # 6 Polarization: 6.41 SS G_CDS: 4.47 Total: 10.88 kcal Atomic # 7 Polarization: 4.05 SS G_CDS: -2.48 Total: 1.56 kcal Atomic # 8 Polarization: -10.27 SS G_CDS: -4.15 Total: -14.42 kcal Atomic # 14 Polarization: -3.54 SS G_CDS: 2.04 Total: -1.50 kcal Total: -28.24 -0.97 -29.21 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_12360594.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.710 kcal (2) G-P(sol) polarization free energy of solvation -28.235 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.945 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.974 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.209 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.919 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds