Wall clock time and date at job start Sun Mar 7 2021 07:02:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.45202 * 109.46867 * 2 1 4 4 C 1.34232 * 116.99450 * 179.97438 * 3 2 1 5 5 O 1.20825 * 120.00145 * 359.97438 * 4 3 2 6 6 C 1.50701 * 119.99784 * 179.97438 * 4 3 2 7 7 H 1.09003 * 112.85270 * 48.80256 * 6 4 3 8 8 C 1.53782 * 113.61507 * 179.97438 * 6 4 3 9 9 C 1.53781 * 87.08004 * 139.98142 * 8 6 4 10 10 O 1.42896 * 113.61670 * 89.19991 * 9 8 6 11 11 C 1.52996 * 113.61599 * 220.01935 * 9 8 6 12 12 N 1.46499 * 109.47279 * 179.97438 * 11 9 8 13 13 C 1.34783 * 119.99982 * 180.02562 * 12 11 9 14 14 O 1.21567 * 120.00183 * 359.97438 * 13 12 11 15 15 C 1.47697 * 119.99978 * 180.02562 * 13 12 11 16 16 C 1.39799 * 120.15371 * 179.72009 * 15 13 12 17 17 F 1.35099 * 120.08497 * 359.97438 * 16 15 13 18 18 C 1.38315 * 119.82878 * 179.74264 * 16 15 13 19 19 C 1.38191 * 120.14549 * 0.56057 * 18 16 15 20 20 C 1.50702 * 119.84151 * 179.72024 * 19 18 16 21 21 O 1.42900 * 109.46871 * 254.97548 * 20 19 18 22 22 Si 1.86298 * 109.47088 * 14.97428 * 20 19 18 23 23 C 1.38649 * 120.31259 * 359.69281 * 19 18 16 24 24 F 1.35102 * 119.91634 * 180.02562 * 23 19 18 25 25 C 1.38070 * 120.16838 * 0.02562 * 23 19 18 26 26 C 1.53783 * 87.08468 * 334.56789 * 9 8 6 27 27 H 1.09001 * 109.46998 * 59.99993 * 1 2 3 28 28 H 1.09000 * 109.47050 * 180.02562 * 1 2 3 29 29 H 1.09001 * 109.46801 * 300.00397 * 1 2 3 30 30 H 1.09001 * 109.47002 * 119.99449 * 2 1 3 31 31 H 1.08993 * 109.46955 * 239.99886 * 2 1 3 32 32 H 1.08994 * 113.61782 * 254.52788 * 8 6 4 33 33 H 1.08997 * 113.61119 * 25.35258 * 8 6 4 34 34 H 0.96702 * 114.00700 * 179.97438 * 10 9 8 35 35 H 1.08996 * 109.47451 * 300.00146 * 11 9 8 36 36 H 1.09001 * 109.47222 * 60.00217 * 11 9 8 37 37 H 0.96997 * 120.00068 * 0.02562 * 12 11 9 38 38 H 1.08005 * 119.92741 * 180.27143 * 18 16 15 39 39 H 1.09000 * 109.47026 * 134.97785 * 20 19 18 40 40 H 0.96701 * 113.99923 * 180.02562 * 21 20 19 41 41 H 1.48506 * 110.00114 * 299.99733 * 22 20 19 42 42 H 1.48494 * 110.00197 * 61.32197 * 22 20 19 43 43 H 1.07996 * 120.07355 * 180.02562 * 25 23 19 44 44 H 1.08998 * 113.61367 * 270.88614 * 26 9 8 45 45 H 1.08999 * 113.61782 * 139.97912 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5866 0.0015 6 6 3.9208 2.9374 0.0000 7 1 3.4709 3.5819 0.7552 8 6 5.4583 2.9681 0.0013 9 6 5.3574 4.1417 -0.9872 10 8 5.2839 5.4199 -0.3527 11 6 6.4005 4.0926 -2.1054 12 7 6.2225 5.2465 -2.9904 13 6 7.0345 5.4122 -4.0533 14 8 7.9150 4.6045 -4.2774 15 6 6.8553 6.5757 -4.9452 16 6 7.6995 6.7539 -6.0452 17 9 8.6828 5.8620 -6.2958 18 6 7.5223 7.8431 -6.8791 19 6 6.5212 8.7599 -6.6201 20 6 6.3383 9.9475 -7.5295 21 8 6.8353 11.1220 -6.8850 22 14 7.2751 9.6656 -9.1150 23 6 5.6840 8.5918 -5.5277 24 9 4.7075 9.4927 -5.2823 25 6 5.8456 7.5062 -4.6902 26 6 3.9876 3.5759 -1.3975 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5139 0.8900 30 1 1.8934 -0.5138 0.8900 31 1 1.8933 -0.5138 -0.8899 32 1 5.8887 3.2439 0.9640 33 1 5.9132 2.0741 -0.4252 34 1 5.2207 6.1622 -0.9693 35 1 7.4000 4.1180 -1.6713 36 1 6.2764 3.1735 -2.6780 37 1 5.5202 5.8911 -2.8114 38 1 8.1707 7.9800 -7.7319 39 1 5.2788 10.0755 -7.7513 40 1 6.7494 11.9271 -7.4137 41 1 8.7212 9.4897 -8.8261 42 1 6.7464 8.4651 -9.8108 43 1 5.1923 7.3766 -3.8400 44 1 4.0404 2.8487 -2.2077 45 1 3.2306 4.3423 -1.5640 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_12360598.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:02:52 Heat of formation + Delta-G solvation = -225.216122 kcal Electronic energy + Delta-G solvation = -33649.842454 eV Core-core repulsion = 28464.703252 eV Total energy + Delta-G solvation = -5185.139202 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.131 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -50.29598 -50.16944 -42.21165 -41.49046 -40.49501 -39.77864 -37.80008 -37.63447 -36.16090 -35.55140 -33.65165 -32.69424 -31.53882 -29.96879 -27.86788 -27.01498 -26.21563 -24.54877 -23.98784 -23.47764 -22.07086 -21.98551 -20.81506 -20.14866 -18.98764 -18.78061 -18.60881 -18.53668 -17.97496 -17.79991 -17.41278 -17.38601 -17.30284 -16.76821 -16.61664 -16.45013 -16.27049 -16.12219 -15.75364 -15.51394 -15.36421 -15.23148 -14.91131 -14.64415 -14.50858 -14.20680 -13.97583 -13.89736 -13.82231 -13.64868 -13.54292 -13.33135 -13.15853 -13.00071 -12.81617 -12.58930 -12.41765 -12.30866 -12.12727 -11.81715 -11.60193 -11.54418 -11.33257 -10.97382 -10.77607 -10.44007 -10.41773 -9.96060 -5.01705 -0.95498 -0.46940 1.02174 1.15973 1.23076 1.53257 1.60486 1.67396 1.88445 2.08790 2.62078 2.69809 2.80508 2.93170 3.06495 3.15757 3.27916 3.36283 3.40065 3.45854 3.58853 3.73474 3.86448 3.93589 3.99712 4.01075 4.18054 4.19275 4.24187 4.26887 4.28706 4.38554 4.52319 4.55778 4.59927 4.61964 4.64857 4.77059 4.82559 4.86290 4.87760 5.00227 5.08567 5.11002 5.23522 5.39491 6.08130 6.56592 6.61322 6.80727 6.82688 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.539 6.539 6 C -0.101 4.101 7 H 0.146 0.854 8 C -0.108 4.108 9 C 0.115 3.885 10 O -0.536 6.536 11 C 0.106 3.894 12 N -0.702 5.702 13 C 0.563 3.437 14 O -0.558 6.558 15 C -0.147 4.147 16 C 0.136 3.864 17 F -0.126 7.126 18 C -0.148 4.148 19 C -0.062 4.062 20 C -0.085 4.085 21 O -0.558 6.558 22 Si 0.778 3.222 23 C 0.110 3.890 24 F -0.118 7.118 25 C -0.070 4.070 26 C -0.137 4.137 27 H 0.070 0.930 28 H 0.095 0.905 29 H 0.069 0.931 30 H 0.066 0.934 31 H 0.067 0.933 32 H 0.094 0.906 33 H 0.104 0.896 34 H 0.393 0.607 35 H 0.074 0.926 36 H 0.081 0.919 37 H 0.415 0.585 38 H 0.149 0.851 39 H 0.106 0.894 40 H 0.410 0.590 41 H -0.288 1.288 42 H -0.283 1.283 43 H 0.195 0.805 44 H 0.096 0.904 45 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.886 7.136 -2.200 10.861 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.314 3.686 5 O -0.429 6.429 6 C -0.120 4.120 7 H 0.164 0.836 8 C -0.146 4.146 9 C 0.073 3.927 10 O -0.344 6.344 11 C -0.018 4.018 12 N -0.357 5.357 13 C 0.350 3.650 14 O -0.437 6.437 15 C -0.151 4.151 16 C 0.116 3.884 17 F -0.104 7.104 18 C -0.166 4.166 19 C -0.063 4.063 20 C -0.194 4.194 21 O -0.369 6.369 22 Si 0.683 3.317 23 C 0.090 3.910 24 F -0.096 7.096 25 C -0.089 4.089 26 C -0.174 4.174 27 H 0.089 0.911 28 H 0.114 0.886 29 H 0.088 0.912 30 H 0.085 0.915 31 H 0.086 0.914 32 H 0.112 0.888 33 H 0.122 0.878 34 H 0.244 0.756 35 H 0.093 0.907 36 H 0.100 0.900 37 H 0.255 0.745 38 H 0.166 0.834 39 H 0.124 0.876 40 H 0.262 0.738 41 H -0.216 1.216 42 H -0.210 1.210 43 H 0.212 0.788 44 H 0.114 0.886 45 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -6.441 4.922 -1.776 8.298 hybrid contribution -0.108 -0.250 0.021 0.273 sum -6.549 4.671 -1.755 8.234 Atomic orbital electron populations 1.21826 0.90616 1.04266 1.03795 1.23261 0.96998 0.79400 1.02431 1.86528 1.24264 1.33420 1.83380 1.24095 0.80546 0.93006 0.70977 1.90674 1.61176 1.44261 1.46809 1.22535 0.96885 0.89659 1.02889 0.83643 1.23077 0.93438 0.96910 1.01174 1.22090 0.93376 0.85501 0.91747 1.86608 1.96205 1.14575 1.37026 1.21979 1.00169 0.89208 0.90451 1.45514 1.35264 1.28213 1.26730 1.17925 0.81541 0.84472 0.81083 1.90895 1.34260 1.45466 1.73065 1.19772 0.99392 0.98547 0.97368 1.17789 0.87295 0.88363 0.94985 1.91594 1.59109 1.66284 1.93441 1.20935 1.00010 0.94417 1.01270 1.19763 0.94177 0.96554 0.95838 1.24797 1.06303 0.85357 1.02985 1.86439 1.85008 1.17913 1.47500 0.93900 0.75868 0.85394 0.76571 1.17242 0.89071 0.89217 0.95444 1.91585 1.59003 1.65450 1.93558 1.21450 0.96644 0.90663 1.00144 1.23687 0.98317 1.01216 0.94200 0.91132 0.88610 0.91224 0.91523 0.91427 0.88778 0.87767 0.75630 0.90739 0.90029 0.74541 0.83352 0.87638 0.73792 1.21613 1.21007 0.78809 0.88570 0.86684 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.55 10.29 71.98 0.74 1.29 16 2 C 0.05 0.06 6.19 71.98 0.45 0.50 16 3 O -0.36 -1.18 10.22 -51.44 -0.53 -1.71 16 4 C 0.47 1.93 7.48 71.24 0.53 2.46 16 5 O -0.54 -5.73 15.65 21.97 0.34 -5.38 16 6 C -0.10 0.25 4.20 -11.01 -0.05 0.21 16 7 H 0.15 -0.73 8.14 -2.39 -0.02 -0.74 16 8 C -0.11 0.20 6.80 31.12 0.21 0.41 16 9 C 0.11 -0.65 1.49 -10.27 -0.02 -0.66 16 10 O -0.54 3.58 13.41 -148.98 -2.00 1.58 16 11 C 0.11 -0.28 5.32 86.38 0.46 0.18 16 12 N -0.70 3.32 5.29 -466.12 -2.46 0.86 16 13 C 0.56 2.30 7.77 86.74 0.67 2.98 16 14 O -0.56 -7.94 15.34 -3.93 -0.06 -8.00 16 15 C -0.15 -0.27 5.88 -20.06 -0.12 -0.38 16 16 C 0.14 0.90 7.28 22.67 0.17 1.06 16 17 F -0.13 -1.60 15.55 44.97 0.70 -0.90 16 18 C -0.15 -0.54 8.62 22.28 0.19 -0.35 16 19 C -0.06 -0.04 5.30 -19.78 -0.10 -0.15 16 20 C -0.08 0.35 2.43 71.24 0.17 0.52 16 21 O -0.56 2.03 12.86 -148.98 -1.92 0.12 16 22 Si 0.78 -3.88 30.18 68.60 2.07 -1.81 16 23 C 0.11 -0.17 7.23 22.33 0.16 -0.01 16 24 F -0.12 0.15 16.73 44.97 0.75 0.91 16 25 C -0.07 0.35 9.51 22.57 0.21 0.56 16 26 C -0.14 0.91 7.01 31.12 0.22 1.13 16 27 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 28 H 0.10 -0.62 8.14 -2.39 -0.02 -0.64 16 29 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 30 H 0.07 0.12 8.13 -2.39 -0.02 0.10 16 31 H 0.07 0.10 8.13 -2.39 -0.02 0.08 16 32 H 0.09 -0.15 8.14 -2.39 -0.02 -0.17 16 33 H 0.10 0.07 7.39 -2.39 -0.02 0.05 16 34 H 0.39 -5.66 7.30 -74.06 -0.54 -6.20 16 35 H 0.07 0.05 8.14 -2.39 -0.02 0.03 16 36 H 0.08 -0.05 7.94 -2.39 -0.02 -0.07 16 37 H 0.42 -5.40 5.06 -92.71 -0.47 -5.87 16 38 H 0.15 0.49 4.87 -2.91 -0.01 0.48 16 39 H 0.11 -0.86 7.89 -2.39 -0.02 -0.87 16 40 H 0.41 -5.77 8.74 -74.06 -0.65 -6.42 16 41 H -0.29 -0.62 6.74 99.48 0.67 0.05 16 42 H -0.28 -0.19 7.11 99.48 0.71 0.51 16 43 H 0.19 -2.81 6.40 -2.91 -0.02 -2.83 16 44 H 0.10 -0.52 7.91 -2.39 -0.02 -0.54 16 45 H 0.11 -1.25 8.14 -2.39 -0.02 -1.27 16 Total: 0.00 -29.72 388.67 0.25 -29.47 By element: Atomic # 1 Polarization: -24.33 SS G_CDS: -0.56 Total: -24.89 kcal Atomic # 6 Polarization: 5.84 SS G_CDS: 3.91 Total: 9.75 kcal Atomic # 7 Polarization: 3.32 SS G_CDS: -2.46 Total: 0.86 kcal Atomic # 8 Polarization: -9.23 SS G_CDS: -4.16 Total: -13.39 kcal Atomic # 9 Polarization: -1.44 SS G_CDS: 1.45 Total: 0.01 kcal Atomic # 14 Polarization: -3.88 SS G_CDS: 2.07 Total: -1.81 kcal Total: -29.72 0.25 -29.47 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_12360598.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -195.743 kcal (2) G-P(sol) polarization free energy of solvation -29.719 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -225.461 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.245 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.474 kcal (6) G-S(sol) free energy of system = (1) + (5) -225.216 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds