Wall clock time and date at job start Sun Mar 7 2021 07:02:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.45199 * 109.47194 * 2 1 4 4 C 1.34225 * 117.00127 * 180.02562 * 3 2 1 5 5 O 1.20826 * 119.99933 * 0.02562 * 4 3 2 6 6 C 1.50707 * 120.00267 * 180.02562 * 4 3 2 7 7 H 1.08999 * 112.84558 * 48.80293 * 6 4 3 8 8 C 1.53778 * 113.61478 * 180.02562 * 6 4 3 9 9 C 1.53774 * 87.07981 * 139.97904 * 8 6 4 10 10 O 1.42903 * 113.61673 * 89.11770 * 9 8 6 11 11 C 1.52996 * 113.61287 * 219.93089 * 9 8 6 12 12 N 1.46501 * 109.47188 * 178.47165 * 11 9 8 13 13 C 1.34781 * 120.00140 * 180.02562 * 12 11 9 14 14 O 1.21591 * 119.99731 * 359.97438 * 13 12 11 15 15 C 1.47533 * 120.00012 * 180.02562 * 13 12 11 16 16 C 1.40139 * 120.19130 * 179.97438 * 15 13 12 17 17 O 1.35653 * 120.15234 * 359.95940 * 16 15 13 18 18 C 1.42897 * 117.00264 * 179.97438 * 17 16 15 19 19 C 1.38706 * 119.70068 * 179.97438 * 16 15 13 20 20 C 1.38059 * 120.08556 * 359.97438 * 19 16 15 21 21 C 1.38550 * 120.38445 * 0.04179 * 20 19 16 22 22 C 1.50702 * 119.84513 * 180.02562 * 21 20 19 23 23 O 1.42900 * 109.47146 * 119.99940 * 22 21 20 24 24 Si 1.86304 * 109.47076 * 0.02562 * 22 21 20 25 25 C 1.37779 * 120.30495 * 359.69947 * 21 20 19 26 26 C 1.53776 * 87.08537 * 334.56708 * 9 8 6 27 27 H 1.08991 * 109.47399 * 179.97438 * 1 2 3 28 28 H 1.09008 * 109.47178 * 299.99972 * 1 2 3 29 29 H 1.09001 * 109.47398 * 59.99394 * 1 2 3 30 30 H 1.08997 * 109.46784 * 240.00622 * 2 1 3 31 31 H 1.08993 * 109.46949 * 119.99909 * 2 1 3 32 32 H 1.08996 * 113.61425 * 25.42877 * 8 6 4 33 33 H 1.09001 * 113.68433 * 254.53711 * 8 6 4 34 34 H 0.96700 * 114.00311 * 179.97438 * 10 9 8 35 35 H 1.09006 * 109.47403 * 298.47194 * 11 9 8 36 36 H 1.08996 * 109.47040 * 58.47202 * 11 9 8 37 37 H 0.97003 * 120.00323 * 0.02562 * 12 11 9 38 38 H 1.08996 * 109.47051 * 299.99611 * 18 17 16 39 39 H 1.09000 * 109.47180 * 59.99876 * 18 17 16 40 40 H 1.09002 * 109.47019 * 179.97438 * 18 17 16 41 41 H 1.07997 * 119.96212 * 180.02562 * 19 16 15 42 42 H 1.07992 * 119.80793 * 180.02562 * 20 19 16 43 43 H 1.08998 * 109.47593 * 240.00264 * 22 21 20 44 44 H 0.96700 * 113.99976 * 179.97438 * 23 22 21 45 45 H 1.48494 * 110.00097 * 298.67908 * 24 22 21 46 46 H 1.48496 * 110.00238 * 60.00073 * 24 22 21 47 47 H 1.08010 * 120.05033 * 180.30001 * 25 21 20 48 48 H 1.09002 * 113.61807 * 139.98218 * 26 9 8 49 49 H 1.09003 * 113.61352 * 270.88748 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5866 -0.0015 6 6 3.9208 2.9374 0.0000 7 1 3.4716 3.5809 0.7564 8 6 5.4583 2.9681 -0.0013 9 6 5.3556 4.1431 -0.9879 10 8 5.2814 5.4204 -0.3513 11 6 6.3981 4.0968 -2.1068 12 7 6.1958 5.2322 -3.0102 13 6 7.0030 5.3969 -4.0769 14 8 7.8994 4.6033 -4.2892 15 6 6.7995 6.5406 -4.9863 16 6 7.6368 6.7160 -6.0964 17 8 8.6392 5.8350 -6.3397 18 6 9.4514 6.0779 -7.4900 19 6 7.4360 7.7946 -6.9450 20 6 6.4152 8.6903 -6.6963 21 6 5.5856 8.5205 -5.5997 22 6 4.4747 9.5052 -5.3401 23 8 3.2194 8.8227 -5.3578 24 14 4.4862 10.8172 -6.6627 25 6 5.7673 7.4518 -4.7493 26 6 3.9851 3.5780 -1.3966 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3634 0.5139 0.8900 29 1 -0.3634 0.5139 -0.8899 30 1 1.8933 -0.5137 -0.8900 31 1 1.8933 -0.5138 0.8899 32 1 5.9124 2.0753 -0.4313 33 1 5.8916 3.2421 0.9606 34 1 5.2171 6.1635 -0.9667 35 1 7.3975 4.1498 -1.6747 36 1 6.2921 3.1659 -2.6638 37 1 5.4809 5.8655 -2.8406 38 1 8.8280 6.0663 -8.3840 39 1 9.9332 7.0511 -7.3957 40 1 10.2129 5.3019 -7.5675 41 1 8.0784 7.9336 -7.8019 42 1 6.2627 9.5282 -7.3602 43 1 4.6218 9.9702 -4.3653 44 1 2.4576 9.3962 -5.1970 45 1 5.7743 11.5557 -6.6344 46 1 4.2863 10.1958 -7.9965 47 1 5.1151 7.3207 -3.8984 48 1 3.2279 4.3447 -1.5606 49 1 4.0365 2.8519 -2.2080 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_12496546.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:02:58 Heat of formation + Delta-G solvation = -170.681290 kcal Electronic energy + Delta-G solvation = -33362.026668 eV Core-core repulsion = 28643.940414 eV Total energy + Delta-G solvation = -4718.086254 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.12499 -41.71435 -40.64092 -39.64621 -39.16986 -37.60178 -37.29957 -35.99801 -35.30544 -32.94977 -32.66721 -32.03268 -29.66708 -28.60289 -27.08664 -26.45181 -26.20780 -24.91959 -23.76635 -22.56173 -21.83264 -21.49214 -20.81541 -19.74858 -18.87609 -18.59852 -18.41283 -17.85700 -17.64191 -17.39336 -17.29394 -16.89334 -16.67910 -16.46048 -16.16343 -15.98224 -15.92597 -15.61155 -15.17137 -14.98900 -14.77129 -14.52391 -14.41869 -14.16206 -14.13151 -13.96003 -13.88588 -13.58851 -13.57466 -13.20274 -13.03498 -12.94207 -12.75252 -12.59033 -12.57115 -12.32661 -12.32226 -12.16610 -11.99798 -11.73074 -11.49243 -11.39804 -10.98023 -10.84190 -10.44274 -10.31970 -10.11974 -9.32131 -5.08487 -0.33344 0.13132 1.15968 1.20096 1.52350 1.65947 1.79220 1.84807 1.98103 2.16431 2.63396 2.72373 3.07264 3.20719 3.29806 3.37884 3.41604 3.47556 3.52076 3.69453 3.89148 3.92717 3.96661 3.99737 4.02405 4.12176 4.13275 4.16235 4.18715 4.30683 4.34049 4.37261 4.51036 4.51372 4.54562 4.57722 4.69332 4.73246 4.77186 4.81429 4.81442 4.86670 4.97576 5.02841 5.04710 5.17185 5.26602 5.41239 5.49823 6.20073 6.30893 6.40906 6.48972 6.78751 7.23538 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.471 3.529 5 O -0.505 6.505 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.100 4.100 9 C 0.097 3.903 10 O -0.530 6.530 11 C 0.106 3.894 12 N -0.732 5.732 13 C 0.565 3.435 14 O -0.510 6.510 15 C -0.174 4.174 16 C 0.194 3.806 17 O -0.278 6.278 18 C 0.018 3.982 19 C -0.211 4.211 20 C -0.053 4.053 21 C -0.123 4.123 22 C -0.066 4.066 23 O -0.547 6.547 24 Si 0.681 3.319 25 C -0.016 4.016 26 C -0.145 4.145 27 H 0.081 0.919 28 H 0.067 0.933 29 H 0.067 0.933 30 H 0.070 0.930 31 H 0.071 0.929 32 H 0.115 0.885 33 H 0.094 0.906 34 H 0.377 0.623 35 H 0.083 0.917 36 H 0.085 0.915 37 H 0.394 0.606 38 H 0.058 0.942 39 H 0.058 0.942 40 H 0.107 0.893 41 H 0.141 0.859 42 H 0.125 0.875 43 H 0.077 0.923 44 H 0.384 0.616 45 H -0.254 1.254 46 H -0.250 1.250 47 H 0.136 0.864 48 H 0.091 0.909 49 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.041 6.452 -0.934 8.241 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.392 6.392 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.138 4.138 9 C 0.056 3.944 10 O -0.336 6.336 11 C -0.018 4.018 12 N -0.388 5.388 13 C 0.353 3.647 14 O -0.384 6.384 15 C -0.178 4.178 16 C 0.145 3.855 17 O -0.188 6.188 18 C -0.077 4.077 19 C -0.230 4.230 20 C -0.071 4.071 21 C -0.123 4.123 22 C -0.176 4.176 23 O -0.353 6.353 24 Si 0.582 3.418 25 C -0.035 4.035 26 C -0.183 4.183 27 H 0.100 0.900 28 H 0.087 0.913 29 H 0.086 0.914 30 H 0.089 0.911 31 H 0.089 0.911 32 H 0.133 0.867 33 H 0.113 0.887 34 H 0.226 0.774 35 H 0.102 0.898 36 H 0.103 0.897 37 H 0.230 0.770 38 H 0.077 0.923 39 H 0.077 0.923 40 H 0.125 0.875 41 H 0.159 0.841 42 H 0.143 0.857 43 H 0.095 0.905 44 H 0.232 0.768 45 H -0.179 1.179 46 H -0.175 1.175 47 H 0.154 0.846 48 H 0.110 0.890 49 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -3.287 4.760 -1.293 5.927 hybrid contribution -0.130 0.300 -0.395 0.513 sum -3.417 5.060 -1.688 6.335 Atomic orbital electron populations 1.21821 0.92331 1.03250 1.03657 1.23088 0.95620 0.79895 1.02754 1.86517 1.24377 1.32713 1.83675 1.23534 0.80690 0.92314 0.72136 1.90687 1.60516 1.42920 1.45097 1.22418 0.97263 0.90999 1.01423 0.85018 1.23052 0.93220 0.96645 1.00863 1.22377 0.93723 0.85452 0.92878 1.86593 1.96278 1.14380 1.36317 1.21923 0.99794 0.90147 0.89890 1.45769 1.35454 1.29739 1.27839 1.17873 0.81685 0.84833 0.80345 1.90868 1.31183 1.44073 1.72322 1.19295 1.00368 0.99935 0.98202 1.19048 0.86988 0.87813 0.91671 1.86379 1.40326 1.46829 1.45302 1.23248 0.94545 1.03200 0.86674 1.21183 1.02598 0.96719 1.02489 1.20863 0.93759 0.97462 0.95019 1.19116 0.97934 0.98273 0.97014 1.24568 0.84494 0.99904 1.08667 1.86480 1.14673 1.38684 1.95475 0.95188 0.86708 0.81444 0.78412 1.20905 0.93468 0.91207 0.97897 1.23674 0.98289 1.01018 0.95301 0.90018 0.91347 0.91379 0.91120 0.91071 0.86720 0.88723 0.77435 0.89842 0.89724 0.77006 0.92315 0.92305 0.87498 0.84107 0.85727 0.90535 0.76837 1.17938 1.17489 0.84595 0.89013 0.88322 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.20 10.29 37.16 0.38 0.58 16 2 C 0.06 0.04 6.19 37.16 0.23 0.27 16 3 O -0.36 -0.74 10.22 -39.24 -0.40 -1.14 16 4 C 0.47 1.13 7.48 36.01 0.27 1.40 16 5 O -0.50 -2.60 15.65 -18.75 -0.29 -2.90 16 6 C -0.10 0.03 4.20 -90.96 -0.38 -0.35 16 7 H 0.13 -0.16 8.14 -51.93 -0.42 -0.58 16 8 C -0.10 0.02 6.80 -25.92 -0.18 -0.15 16 9 C 0.10 -0.13 1.46 -89.82 -0.13 -0.26 16 10 O -0.53 0.72 13.41 -35.23 -0.47 0.25 16 11 C 0.11 0.01 5.31 -4.04 -0.02 -0.02 16 12 N -0.73 0.12 5.28 -61.35 -0.32 -0.20 16 13 C 0.57 2.05 7.76 -12.47 -0.10 1.95 16 14 O -0.51 -3.88 15.16 -16.59 -0.25 -4.14 16 15 C -0.17 -0.47 5.89 -104.84 -0.62 -1.08 16 16 C 0.19 0.63 6.70 -38.70 -0.26 0.37 16 17 O -0.28 -1.16 8.57 -40.54 -0.35 -1.51 16 18 C 0.02 0.00 9.81 101.05 0.99 0.99 16 19 C -0.21 -0.28 9.03 -39.47 -0.36 -0.64 16 20 C -0.05 -0.06 8.66 -39.53 -0.34 -0.40 16 21 C -0.12 -0.08 5.42 -104.67 -0.57 -0.64 16 22 C -0.07 0.13 2.81 36.01 0.10 0.23 16 23 O -0.55 1.07 12.73 -35.23 -0.45 0.62 16 24 Si 0.68 -1.65 29.77 -169.99 -5.06 -6.71 16 25 C -0.02 -0.01 9.08 -39.20 -0.36 -0.36 16 26 C -0.15 0.23 7.01 -25.92 -0.18 0.05 16 27 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 28 H 0.07 -0.09 8.14 -51.92 -0.42 -0.51 16 29 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.07 0.05 8.13 -51.93 -0.42 -0.37 16 31 H 0.07 0.05 8.13 -51.93 -0.42 -0.37 16 32 H 0.11 0.05 7.39 -51.93 -0.38 -0.34 16 33 H 0.09 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.38 -1.71 7.39 45.56 0.34 -1.37 16 35 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 36 H 0.08 0.07 7.98 -51.93 -0.41 -0.34 16 37 H 0.39 -1.25 5.15 -40.82 -0.21 -1.46 16 38 H 0.06 -0.08 7.66 -51.93 -0.40 -0.48 16 39 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 40 H 0.11 -0.13 8.14 -51.93 -0.42 -0.55 16 41 H 0.14 -0.13 6.30 -52.49 -0.33 -0.46 16 42 H 0.13 0.02 4.85 -52.49 -0.25 -0.23 16 43 H 0.08 -0.30 7.96 -51.93 -0.41 -0.71 16 44 H 0.38 -2.58 8.74 45.56 0.40 -2.18 16 45 H -0.25 0.00 7.11 56.52 0.40 0.40 16 46 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 47 H 0.14 -0.35 6.40 -52.48 -0.34 -0.69 16 48 H 0.09 -0.25 8.14 -51.93 -0.42 -0.68 16 49 H 0.10 -0.11 7.94 -51.93 -0.41 -0.52 16 LS Contribution 405.73 15.07 6.11 6.11 Total: 0.00 -12.10 405.73 -9.24 -21.34 By element: Atomic # 1 Polarization: -7.43 SS G_CDS: -6.24 Total: -13.67 kcal Atomic # 6 Polarization: 3.45 SS G_CDS: -1.51 Total: 1.94 kcal Atomic # 7 Polarization: 0.12 SS G_CDS: -0.32 Total: -0.20 kcal Atomic # 8 Polarization: -6.60 SS G_CDS: -2.21 Total: -8.81 kcal Atomic # 14 Polarization: -1.65 SS G_CDS: -5.06 Total: -6.71 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -12.10 -9.24 -21.34 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_12496546.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -149.340 kcal (2) G-P(sol) polarization free energy of solvation -12.102 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -161.442 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.239 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.341 kcal (6) G-S(sol) free energy of system = (1) + (5) -170.681 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds