Wall clock time and date at job start Sun Mar 7 2021 07:02:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.45199 * 109.47194 * 2 1 4 4 C 1.34225 * 117.00127 * 180.02562 * 3 2 1 5 5 O 1.20826 * 119.99933 * 0.02562 * 4 3 2 6 6 C 1.50707 * 120.00267 * 180.02562 * 4 3 2 7 7 H 1.08999 * 112.84558 * 48.80293 * 6 4 3 8 8 C 1.53778 * 113.61478 * 180.02562 * 6 4 3 9 9 C 1.53774 * 87.07981 * 139.97904 * 8 6 4 10 10 O 1.42903 * 113.61673 * 89.11770 * 9 8 6 11 11 C 1.52996 * 113.61287 * 219.93089 * 9 8 6 12 12 N 1.46501 * 109.47188 * 178.47165 * 11 9 8 13 13 C 1.34781 * 120.00140 * 180.02562 * 12 11 9 14 14 O 1.21591 * 119.99731 * 359.97438 * 13 12 11 15 15 C 1.47533 * 120.00012 * 180.02562 * 13 12 11 16 16 C 1.40139 * 120.19130 * 179.97438 * 15 13 12 17 17 O 1.35653 * 120.15234 * 359.95940 * 16 15 13 18 18 C 1.42897 * 117.00264 * 179.97438 * 17 16 15 19 19 C 1.38706 * 119.70068 * 179.97438 * 16 15 13 20 20 C 1.38059 * 120.08556 * 359.97438 * 19 16 15 21 21 C 1.38550 * 120.38445 * 0.04179 * 20 19 16 22 22 C 1.50702 * 119.84513 * 180.02562 * 21 20 19 23 23 O 1.42900 * 109.47146 * 119.99940 * 22 21 20 24 24 Si 1.86304 * 109.47076 * 0.02562 * 22 21 20 25 25 C 1.37779 * 120.30495 * 359.69947 * 21 20 19 26 26 C 1.53776 * 87.08537 * 334.56708 * 9 8 6 27 27 H 1.08991 * 109.47399 * 179.97438 * 1 2 3 28 28 H 1.09008 * 109.47178 * 299.99972 * 1 2 3 29 29 H 1.09001 * 109.47398 * 59.99394 * 1 2 3 30 30 H 1.08997 * 109.46784 * 240.00622 * 2 1 3 31 31 H 1.08993 * 109.46949 * 119.99909 * 2 1 3 32 32 H 1.08996 * 113.61425 * 25.42877 * 8 6 4 33 33 H 1.09001 * 113.68433 * 254.53711 * 8 6 4 34 34 H 0.96700 * 114.00311 * 179.97438 * 10 9 8 35 35 H 1.09006 * 109.47403 * 298.47194 * 11 9 8 36 36 H 1.08996 * 109.47040 * 58.47202 * 11 9 8 37 37 H 0.97003 * 120.00323 * 0.02562 * 12 11 9 38 38 H 1.08996 * 109.47051 * 299.99611 * 18 17 16 39 39 H 1.09000 * 109.47180 * 59.99876 * 18 17 16 40 40 H 1.09002 * 109.47019 * 179.97438 * 18 17 16 41 41 H 1.07997 * 119.96212 * 180.02562 * 19 16 15 42 42 H 1.07992 * 119.80793 * 180.02562 * 20 19 16 43 43 H 1.08998 * 109.47593 * 240.00264 * 22 21 20 44 44 H 0.96700 * 113.99976 * 179.97438 * 23 22 21 45 45 H 1.48494 * 110.00097 * 298.67908 * 24 22 21 46 46 H 1.48496 * 110.00238 * 60.00073 * 24 22 21 47 47 H 1.08010 * 120.05033 * 180.30001 * 25 21 20 48 48 H 1.09002 * 113.61807 * 139.98218 * 26 9 8 49 49 H 1.09003 * 113.61352 * 270.88748 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5866 -0.0015 6 6 3.9208 2.9374 0.0000 7 1 3.4716 3.5809 0.7564 8 6 5.4583 2.9681 -0.0013 9 6 5.3556 4.1431 -0.9879 10 8 5.2814 5.4204 -0.3513 11 6 6.3981 4.0968 -2.1068 12 7 6.1958 5.2322 -3.0102 13 6 7.0030 5.3969 -4.0769 14 8 7.8994 4.6033 -4.2892 15 6 6.7995 6.5406 -4.9863 16 6 7.6368 6.7160 -6.0964 17 8 8.6392 5.8350 -6.3397 18 6 9.4514 6.0779 -7.4900 19 6 7.4360 7.7946 -6.9450 20 6 6.4152 8.6903 -6.6963 21 6 5.5856 8.5205 -5.5997 22 6 4.4747 9.5052 -5.3401 23 8 3.2194 8.8227 -5.3578 24 14 4.4862 10.8172 -6.6627 25 6 5.7673 7.4518 -4.7493 26 6 3.9851 3.5780 -1.3966 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3634 0.5139 0.8900 29 1 -0.3634 0.5139 -0.8899 30 1 1.8933 -0.5137 -0.8900 31 1 1.8933 -0.5138 0.8899 32 1 5.9124 2.0753 -0.4313 33 1 5.8916 3.2421 0.9606 34 1 5.2171 6.1635 -0.9667 35 1 7.3975 4.1498 -1.6747 36 1 6.2921 3.1659 -2.6638 37 1 5.4809 5.8655 -2.8406 38 1 8.8280 6.0663 -8.3840 39 1 9.9332 7.0511 -7.3957 40 1 10.2129 5.3019 -7.5675 41 1 8.0784 7.9336 -7.8019 42 1 6.2627 9.5282 -7.3602 43 1 4.6218 9.9702 -4.3653 44 1 2.4576 9.3962 -5.1970 45 1 5.7743 11.5557 -6.6344 46 1 4.2863 10.1958 -7.9965 47 1 5.1151 7.3207 -3.8984 48 1 3.2279 4.3447 -1.5606 49 1 4.0365 2.8519 -2.2080 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_12496546.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:02:57 Heat of formation + Delta-G solvation = -174.821618 kcal Electronic energy + Delta-G solvation = -33362.206206 eV Core-core repulsion = 28643.940414 eV Total energy + Delta-G solvation = -4718.265793 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.20548 -41.82278 -40.73100 -39.80556 -39.17856 -37.77402 -37.16067 -36.03177 -35.40286 -33.01616 -32.66601 -32.03653 -29.70850 -28.59032 -27.03460 -26.51865 -26.13358 -24.99497 -23.77039 -22.60134 -21.91250 -21.61554 -20.78832 -19.81654 -18.97300 -18.59136 -18.32595 -17.91252 -17.76015 -17.39089 -17.34800 -17.00017 -16.77739 -16.46280 -16.20407 -16.00271 -15.96590 -15.52022 -15.23201 -15.01238 -14.80063 -14.59619 -14.49786 -14.17501 -14.12621 -13.90289 -13.80559 -13.60747 -13.52446 -13.26029 -13.00481 -12.98052 -12.77969 -12.57427 -12.53478 -12.36815 -12.28698 -12.19236 -11.92535 -11.75640 -11.58571 -11.47895 -11.08665 -10.92471 -10.46274 -10.27851 -10.18560 -9.38616 -4.90639 -0.43534 0.09033 1.03592 1.34399 1.59206 1.61995 1.68850 1.88988 2.00267 2.14257 2.53997 2.83249 3.09933 3.28439 3.35829 3.39681 3.42764 3.48985 3.55401 3.74378 3.89005 3.92767 3.95011 4.02581 4.05987 4.17734 4.20061 4.23712 4.26996 4.29967 4.30693 4.47046 4.57010 4.57399 4.59952 4.64802 4.67216 4.78852 4.80003 4.85424 4.87795 4.89541 4.92544 5.09748 5.12317 5.14250 5.17892 5.40767 5.41144 6.14549 6.33124 6.60075 6.62828 6.98466 7.07722 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.099 4.099 7 H 0.147 0.853 8 C -0.107 4.107 9 C 0.115 3.885 10 O -0.536 6.536 11 C 0.109 3.891 12 N -0.712 5.712 13 C 0.562 3.438 14 O -0.560 6.560 15 C -0.192 4.192 16 C 0.171 3.829 17 O -0.309 6.309 18 C 0.011 3.989 19 C -0.214 4.214 20 C -0.065 4.065 21 C -0.133 4.133 22 C -0.065 4.065 23 O -0.561 6.561 24 Si 0.761 3.239 25 C -0.009 4.009 26 C -0.137 4.137 27 H 0.095 0.905 28 H 0.069 0.931 29 H 0.069 0.931 30 H 0.066 0.934 31 H 0.067 0.933 32 H 0.102 0.898 33 H 0.095 0.905 34 H 0.392 0.608 35 H 0.070 0.930 36 H 0.074 0.926 37 H 0.411 0.589 38 H 0.069 0.931 39 H 0.071 0.929 40 H 0.112 0.888 41 H 0.157 0.843 42 H 0.129 0.871 43 H 0.106 0.894 44 H 0.405 0.595 45 H -0.289 1.289 46 H -0.300 1.300 47 H 0.167 0.833 48 H 0.113 0.887 49 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.024 8.208 -0.233 10.806 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.275 6.275 4 C 0.314 3.686 5 O -0.429 6.429 6 C -0.118 4.118 7 H 0.165 0.835 8 C -0.145 4.145 9 C 0.073 3.927 10 O -0.344 6.344 11 C -0.015 4.015 12 N -0.368 5.368 13 C 0.350 3.650 14 O -0.439 6.439 15 C -0.196 4.196 16 C 0.122 3.878 17 O -0.221 6.221 18 C -0.083 4.083 19 C -0.232 4.232 20 C -0.083 4.083 21 C -0.133 4.133 22 C -0.176 4.176 23 O -0.371 6.371 24 Si 0.668 3.332 25 C -0.027 4.027 26 C -0.174 4.174 27 H 0.114 0.886 28 H 0.088 0.912 29 H 0.088 0.912 30 H 0.085 0.915 31 H 0.085 0.915 32 H 0.121 0.879 33 H 0.113 0.887 34 H 0.243 0.757 35 H 0.088 0.912 36 H 0.092 0.908 37 H 0.250 0.750 38 H 0.088 0.912 39 H 0.090 0.910 40 H 0.130 0.870 41 H 0.174 0.826 42 H 0.146 0.854 43 H 0.124 0.876 44 H 0.257 0.743 45 H -0.216 1.216 46 H -0.228 1.228 47 H 0.185 0.815 48 H 0.132 0.868 49 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -5.346 6.570 -0.558 8.489 hybrid contribution 0.471 -0.222 -0.668 0.847 sum -4.874 6.348 -1.226 8.097 Atomic orbital electron populations 1.21824 0.90576 1.04262 1.03816 1.23261 0.97027 0.79407 1.02414 1.86525 1.24216 1.33422 1.83370 1.24085 0.80563 0.92981 0.70962 1.90671 1.61188 1.44250 1.46831 1.22525 0.96832 0.89663 1.02743 0.83502 1.23065 0.93471 0.96822 1.01162 1.22083 0.93347 0.85510 0.91737 1.86577 1.96201 1.14600 1.37005 1.21869 0.99758 0.89789 0.90121 1.45568 1.34976 1.29683 1.26530 1.18142 0.81328 0.84600 0.80901 1.90836 1.33448 1.45876 1.73710 1.19450 1.01468 1.00359 0.98295 1.19356 0.87395 0.88452 0.92594 1.86336 1.41076 1.47805 1.46847 1.23452 0.94601 1.04170 0.86095 1.21356 1.02949 0.96206 1.02719 1.21093 0.93999 0.97617 0.95576 1.19538 0.98493 0.98791 0.96519 1.24584 0.83989 0.98781 1.10208 1.86430 1.15315 1.39797 1.95608 0.94355 0.84193 0.79245 0.75369 1.21188 0.92759 0.90196 0.98561 1.23660 0.98409 1.01145 0.94230 0.88608 0.91151 0.91167 0.91515 0.91467 0.87917 0.88656 0.75669 0.91175 0.90757 0.74983 0.91207 0.91000 0.86950 0.82578 0.85361 0.87585 0.74303 1.21635 1.22807 0.81529 0.86811 0.88906 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.46 10.29 71.98 0.74 1.20 16 2 C 0.05 0.10 6.19 71.98 0.45 0.54 16 3 O -0.36 -1.53 10.22 -51.37 -0.53 -2.06 16 4 C 0.47 2.50 7.48 71.24 0.53 3.04 16 5 O -0.54 -6.36 15.65 21.96 0.34 -6.02 16 6 C -0.10 0.10 4.20 -11.01 -0.05 0.05 16 7 H 0.15 -0.56 8.14 -2.39 -0.02 -0.58 16 8 C -0.11 0.01 6.80 31.12 0.21 0.22 16 9 C 0.12 -0.36 1.46 -10.27 -0.02 -0.38 16 10 O -0.54 2.43 13.41 -148.98 -2.00 0.43 16 11 C 0.11 0.08 5.31 86.38 0.46 0.54 16 12 N -0.71 0.34 5.28 -466.27 -2.46 -2.12 16 13 C 0.56 4.70 7.76 86.69 0.67 5.37 16 14 O -0.56 -9.92 15.16 16.92 0.26 -9.66 16 15 C -0.19 -1.15 5.89 -20.01 -0.12 -1.26 16 16 C 0.17 1.34 6.70 22.84 0.15 1.49 16 17 O -0.31 -3.23 8.57 -68.77 -0.59 -3.82 16 18 C 0.01 0.01 9.81 113.37 1.11 1.12 16 19 C -0.21 -0.74 9.03 22.34 0.20 -0.53 16 20 C -0.07 -0.15 8.66 22.30 0.19 0.04 16 21 C -0.13 -0.02 5.42 -19.90 -0.11 -0.13 16 22 C -0.06 0.40 2.81 71.24 0.20 0.60 16 23 O -0.56 3.69 12.73 -148.98 -1.90 1.79 16 24 Si 0.76 -4.26 29.77 68.60 2.04 -2.22 16 25 C -0.01 0.00 9.08 22.52 0.20 0.21 16 26 C -0.14 0.58 7.01 31.12 0.22 0.79 16 27 H 0.10 -0.56 8.14 -2.39 -0.02 -0.58 16 28 H 0.07 -0.23 8.14 -2.38 -0.02 -0.25 16 29 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 30 H 0.07 0.16 8.13 -2.39 -0.02 0.14 16 31 H 0.07 0.16 8.13 -2.39 -0.02 0.15 16 32 H 0.10 0.26 7.39 -2.39 -0.02 0.24 16 33 H 0.09 -0.02 8.14 -2.39 -0.02 -0.04 16 34 H 0.39 -4.57 7.39 -74.06 -0.55 -5.11 16 35 H 0.07 0.27 8.14 -2.38 -0.02 0.26 16 36 H 0.07 0.24 7.98 -2.39 -0.02 0.23 16 37 H 0.41 -3.30 5.15 -92.71 -0.48 -3.77 16 38 H 0.07 -0.13 7.66 -2.39 -0.02 -0.15 16 39 H 0.07 -0.16 7.66 -2.39 -0.02 -0.18 16 40 H 0.11 -0.10 8.14 -2.39 -0.02 -0.12 16 41 H 0.16 -0.18 6.30 -2.91 -0.02 -0.19 16 42 H 0.13 0.10 4.85 -2.91 -0.01 0.09 16 43 H 0.11 -1.22 7.96 -2.39 -0.02 -1.24 16 44 H 0.41 -6.69 8.74 -74.06 -0.65 -7.34 16 45 H -0.29 -0.01 7.11 99.48 0.71 0.70 16 46 H -0.30 -0.79 7.11 99.48 0.71 -0.08 16 47 H 0.17 -1.32 6.40 -2.91 -0.02 -1.34 16 48 H 0.11 -0.94 8.14 -2.39 -0.02 -0.96 16 49 H 0.09 -0.23 7.94 -2.39 -0.02 -0.25 16 Total: 0.00 -31.02 405.73 -0.39 -31.41 By element: Atomic # 1 Polarization: -20.03 SS G_CDS: -0.61 Total: -20.64 kcal Atomic # 6 Polarization: 7.85 SS G_CDS: 5.06 Total: 12.91 kcal Atomic # 7 Polarization: 0.34 SS G_CDS: -2.46 Total: -2.12 kcal Atomic # 8 Polarization: -14.92 SS G_CDS: -4.41 Total: -19.33 kcal Atomic # 14 Polarization: -4.26 SS G_CDS: 2.04 Total: -2.22 kcal Total: -31.02 -0.39 -31.41 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_12496546.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -143.414 kcal (2) G-P(sol) polarization free energy of solvation -31.023 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -174.436 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.385 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.408 kcal (6) G-S(sol) free energy of system = (1) + (5) -174.822 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds