Wall clock time and date at job start Sun Mar 7 2021 07:03:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45201 * 109.47183 * 2 1 4 4 C 1.34218 * 117.00604 * 179.97438 * 3 2 1 5 5 O 1.20830 * 119.99813 * 0.02562 * 4 3 2 6 6 C 1.50699 * 120.00516 * 179.97438 * 4 3 2 7 7 H 1.08993 * 112.85036 * 48.80074 * 6 4 3 8 8 C 1.53781 * 113.61439 * 180.02562 * 6 4 3 9 9 C 1.53787 * 87.07955 * 140.06644 * 8 6 4 10 10 O 1.42895 * 113.61802 * 89.19952 * 9 8 6 11 11 C 1.53006 * 113.61055 * 220.01695 * 9 8 6 12 12 N 1.46500 * 109.46998 * 178.46922 * 11 9 8 13 13 C 1.34769 * 120.00237 * 180.02562 * 12 11 9 14 14 O 1.21573 * 120.00109 * 359.97438 * 13 12 11 15 15 C 1.47728 * 120.00444 * 180.02562 * 13 12 11 16 16 C 1.39626 * 120.12200 * 179.72243 * 15 13 12 17 17 C 1.37855 * 119.88208 * 179.67314 * 16 15 13 18 18 C 1.50700 * 119.94366 * 180.34045 * 17 16 15 19 19 O 1.42900 * 109.47143 * 255.28182 * 18 17 16 20 20 Si 1.86308 * 109.46744 * 135.28337 * 18 17 16 21 21 C 1.38641 * 120.11570 * 0.62492 * 17 16 15 22 22 F 1.35094 * 119.88078 * 179.69553 * 21 17 16 23 23 C 1.38677 * 120.23592 * 359.67182 * 21 17 16 24 24 C 1.37812 * 120.12226 * 0.02562 * 23 21 17 25 25 C 1.53780 * 87.17190 * 334.60431 * 9 8 6 26 26 H 1.08997 * 109.47261 * 60.00223 * 1 2 3 27 27 H 1.09009 * 109.46571 * 179.97438 * 1 2 3 28 28 H 1.09000 * 109.47586 * 299.99819 * 1 2 3 29 29 H 1.08992 * 109.47362 * 239.99984 * 2 1 3 30 30 H 1.09000 * 109.46814 * 119.99565 * 2 1 3 31 31 H 1.08991 * 113.61661 * 25.51822 * 8 6 4 32 32 H 1.09001 * 113.61116 * 254.61089 * 8 6 4 33 33 H 0.96694 * 114.00383 * 181.52650 * 10 9 8 34 34 H 1.08993 * 109.46955 * 298.47147 * 11 9 8 35 35 H 1.09000 * 109.47050 * 58.46976 * 11 9 8 36 36 H 0.97010 * 119.99909 * 359.97438 * 12 11 9 37 37 H 1.08004 * 120.05988 * 359.97438 * 16 15 13 38 38 H 1.08996 * 109.46988 * 15.28346 * 18 17 16 39 39 H 0.96702 * 113.99692 * 180.02562 * 19 18 17 40 40 H 1.48498 * 110.00160 * 60.00253 * 20 18 17 41 41 H 1.48503 * 109.99301 * 181.32129 * 20 18 17 42 42 H 1.08006 * 119.93707 * 180.02562 * 23 21 17 43 43 H 1.08005 * 120.05960 * 179.97438 * 24 23 21 44 44 H 1.09006 * 113.61092 * 139.93608 * 25 9 8 45 45 H 1.08997 * 113.61844 * 270.84293 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3446 1.5449 0.0005 5 8 4.0807 0.5868 0.0005 6 6 3.9206 2.9375 0.0000 7 1 3.4707 3.5819 0.7551 8 6 5.4581 2.9682 0.0001 9 6 5.3563 4.1437 -0.9863 10 8 5.2834 5.4208 -0.3494 11 6 6.3986 4.0966 -2.1054 12 7 6.1971 5.2324 -3.0085 13 6 7.0041 5.3965 -4.0753 14 8 7.8997 4.6023 -4.2880 15 6 6.8013 6.5421 -4.9857 16 6 7.6396 6.7178 -6.0884 17 6 7.4416 7.7848 -6.9386 18 6 8.3408 7.9714 -8.1334 19 8 9.2587 9.0363 -7.8772 20 14 7.3090 8.3871 -9.6280 21 6 6.4205 8.6899 -6.6929 22 9 6.2347 9.7372 -7.5257 23 6 5.5889 8.5235 -5.5957 24 6 5.7741 7.4569 -4.7429 25 6 3.9855 3.5809 -1.3972 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0278 -0.0005 28 1 -0.3634 0.5138 0.8900 29 1 1.8933 -0.5138 -0.8899 30 1 1.8933 -0.5138 0.8900 31 1 5.9127 2.0757 -0.4297 32 1 5.8892 3.2423 0.9629 33 1 5.1957 6.1623 -0.9638 34 1 7.3980 4.1486 -1.6735 35 1 6.2916 3.1659 -2.6626 36 1 5.4823 5.8659 -2.8391 37 1 8.4386 6.0163 -6.2778 38 1 8.8945 7.0511 -8.3187 39 1 9.8695 9.2129 -8.6058 40 1 6.5490 9.6401 -9.3881 41 1 8.1812 8.5422 -10.8199 42 1 4.7947 9.2313 -5.4091 43 1 5.1261 7.3285 -3.8884 44 1 3.2294 4.3489 -1.5607 45 1 4.0367 2.8562 -2.2097 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_12496548.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:03:01 Heat of formation + Delta-G solvation = -177.519724 kcal Electronic energy + Delta-G solvation = -30853.354071 eV Core-core repulsion = 26139.737115 eV Total energy + Delta-G solvation = -4713.616956 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.140 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -50.38875 -42.14253 -41.40862 -40.41124 -39.46178 -37.80074 -37.74614 -36.03547 -35.44347 -33.11071 -32.66425 -32.08843 -29.59728 -27.07205 -26.94766 -26.42102 -24.60951 -23.66217 -23.35185 -21.92683 -21.54790 -20.75225 -19.43438 -18.92384 -18.76122 -18.65221 -18.17365 -17.75510 -17.37337 -17.33363 -17.08957 -16.81663 -16.52204 -16.13656 -16.02658 -15.43582 -15.33389 -15.12924 -14.97092 -14.81034 -14.66831 -14.48435 -14.17596 -14.04029 -13.89073 -13.78131 -13.49707 -13.46587 -13.23471 -12.96370 -12.89007 -12.72581 -12.55466 -12.31496 -12.26047 -11.73877 -11.56645 -11.48822 -11.41249 -11.17669 -10.89487 -10.78747 -10.34897 -10.10795 -9.80782 -4.97878 -0.50124 0.02234 1.06281 1.20478 1.53790 1.57312 1.61837 1.89646 1.96215 2.53507 2.87701 3.03879 3.13132 3.18960 3.37155 3.44426 3.47780 3.58930 3.60923 3.67349 3.91877 3.96827 3.98935 4.04317 4.12349 4.23243 4.27221 4.31918 4.35546 4.61593 4.62338 4.69003 4.71923 4.77516 4.81707 4.88655 4.89492 4.92332 4.93064 5.00046 5.07743 5.12647 5.15023 5.18823 5.43191 5.60553 6.31873 6.46637 6.65205 6.66515 7.05162 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.102 4.102 7 H 0.144 0.856 8 C -0.109 4.109 9 C 0.115 3.885 10 O -0.538 6.538 11 C 0.107 3.893 12 N -0.708 5.708 13 C 0.565 3.435 14 O -0.573 6.573 15 C -0.155 4.155 16 C -0.020 4.020 17 C -0.127 4.127 18 C -0.085 4.085 19 O -0.556 6.556 20 Si 0.746 3.254 21 C 0.113 3.887 22 F -0.133 7.133 23 C -0.151 4.151 24 C -0.035 4.035 25 C -0.135 4.135 26 H 0.070 0.930 27 H 0.095 0.905 28 H 0.068 0.932 29 H 0.068 0.932 30 H 0.066 0.934 31 H 0.104 0.896 32 H 0.091 0.909 33 H 0.394 0.606 34 H 0.070 0.930 35 H 0.080 0.920 36 H 0.415 0.585 37 H 0.142 0.858 38 H 0.098 0.902 39 H 0.396 0.604 40 H -0.269 1.269 41 H -0.292 1.292 42 H 0.172 0.828 43 H 0.182 0.818 44 H 0.116 0.884 45 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.192 1.085 0.169 7.276 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.314 3.686 5 O -0.430 6.430 6 C -0.121 4.121 7 H 0.162 0.838 8 C -0.147 4.147 9 C 0.073 3.927 10 O -0.346 6.346 11 C -0.017 4.017 12 N -0.362 5.362 13 C 0.353 3.647 14 O -0.454 6.454 15 C -0.158 4.158 16 C -0.039 4.039 17 C -0.128 4.128 18 C -0.193 4.193 19 O -0.366 6.366 20 Si 0.649 3.351 21 C 0.093 3.907 22 F -0.111 7.111 23 C -0.170 4.170 24 C -0.053 4.053 25 C -0.172 4.172 26 H 0.089 0.911 27 H 0.113 0.887 28 H 0.087 0.913 29 H 0.086 0.914 30 H 0.084 0.916 31 H 0.122 0.878 32 H 0.110 0.890 33 H 0.245 0.755 34 H 0.088 0.912 35 H 0.098 0.902 36 H 0.254 0.746 37 H 0.159 0.841 38 H 0.116 0.884 39 H 0.247 0.753 40 H -0.195 1.195 41 H -0.220 1.220 42 H 0.190 0.810 43 H 0.199 0.801 44 H 0.134 0.866 45 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -6.833 0.469 0.488 6.866 hybrid contribution 1.215 0.930 -0.635 1.657 sum -5.618 1.399 -0.147 5.791 Atomic orbital electron populations 1.21825 0.90654 1.04241 1.03793 1.23252 0.96964 0.79427 1.02424 1.86523 1.24301 1.33390 1.83382 1.24107 0.80520 0.93031 0.70961 1.90675 1.61176 1.44281 1.46835 1.22572 0.96861 0.89594 1.03067 0.83790 1.23070 0.93408 0.97029 1.01183 1.22081 0.93478 0.85377 0.91736 1.86599 1.96006 1.14805 1.37227 1.21900 0.99711 0.89985 0.90139 1.45554 1.34864 1.29515 1.26277 1.18268 0.81038 0.84504 0.80853 1.90822 1.33951 1.46401 1.74184 1.19899 1.00262 0.97773 0.97862 1.21014 0.96971 0.95219 0.90719 1.19284 0.97288 0.96960 0.99233 1.24860 0.96583 0.94078 1.03820 1.86553 1.49740 1.54496 1.45803 0.94666 0.82734 0.85351 0.72311 1.18275 0.96665 0.85013 0.90698 1.91537 1.94511 1.55850 1.69209 1.21434 1.01068 1.01018 0.93451 1.21540 0.94634 0.90510 0.98610 1.23708 0.98305 1.01186 0.94044 0.91081 0.88655 0.91276 0.91365 0.91601 0.87800 0.88997 0.75520 0.91150 0.90201 0.74589 0.84055 0.88356 0.75277 1.19541 1.21963 0.81009 0.80093 0.86605 0.88509 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.64 10.29 71.98 0.74 1.38 16 2 C 0.05 0.02 6.19 71.98 0.45 0.47 16 3 O -0.36 -0.90 10.22 -51.30 -0.52 -1.43 16 4 C 0.47 1.54 7.49 71.24 0.53 2.08 16 5 O -0.54 -5.31 15.65 21.95 0.34 -4.97 16 6 C -0.10 0.35 4.19 -10.95 -0.05 0.30 16 7 H 0.14 -0.82 8.14 -2.39 -0.02 -0.84 16 8 C -0.11 0.29 6.80 31.12 0.21 0.50 16 9 C 0.12 -0.79 1.46 -10.26 -0.01 -0.80 16 10 O -0.54 4.18 13.40 -148.98 -2.00 2.18 16 11 C 0.11 -0.45 5.30 86.38 0.46 0.01 16 12 N -0.71 4.94 5.29 -466.09 -2.47 2.47 16 13 C 0.56 0.39 7.77 86.75 0.67 1.07 16 14 O -0.57 -5.90 16.34 -3.95 -0.06 -5.97 16 15 C -0.15 0.31 5.87 -20.09 -0.12 0.20 16 16 C -0.02 -0.03 9.21 22.51 0.21 0.18 16 17 C -0.13 -0.23 4.80 -19.86 -0.10 -0.32 16 18 C -0.09 -0.07 2.79 71.24 0.20 0.13 16 19 O -0.56 -2.13 12.86 -148.98 -1.92 -4.05 16 20 Si 0.75 0.10 30.77 68.60 2.11 2.21 16 21 C 0.11 0.15 6.67 22.47 0.15 0.30 16 22 F -0.13 -0.76 12.84 44.97 0.58 -0.18 16 23 C -0.15 0.83 10.01 22.27 0.22 1.06 16 24 C -0.03 0.30 9.54 22.52 0.21 0.51 16 25 C -0.13 1.08 7.03 31.18 0.22 1.30 16 26 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 27 H 0.09 -0.67 8.14 -2.38 -0.02 -0.69 16 28 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 29 H 0.07 0.05 8.13 -2.39 -0.02 0.03 16 30 H 0.07 0.08 8.13 -2.39 -0.02 0.06 16 31 H 0.10 -0.02 7.39 -2.39 -0.02 -0.04 16 32 H 0.09 -0.19 8.14 -2.39 -0.02 -0.21 16 33 H 0.39 -6.23 7.42 -74.06 -0.55 -6.78 16 34 H 0.07 -0.04 8.14 -2.39 -0.02 -0.05 16 35 H 0.08 -0.17 7.98 -2.39 -0.02 -0.19 16 36 H 0.41 -6.29 5.15 -92.70 -0.48 -6.77 16 37 H 0.14 0.32 7.59 -2.91 -0.02 0.30 16 38 H 0.10 -0.30 7.77 -2.39 -0.02 -0.31 16 39 H 0.40 -1.59 8.74 -74.06 -0.65 -2.24 16 40 H -0.27 -1.84 5.33 99.48 0.53 -1.31 16 41 H -0.29 -1.29 7.11 99.48 0.71 -0.59 16 42 H 0.17 -1.82 8.06 -2.91 -0.02 -1.84 16 43 H 0.18 -3.31 6.40 -2.91 -0.02 -3.32 16 44 H 0.12 -1.44 8.14 -2.38 -0.02 -1.46 16 45 H 0.10 -0.66 7.94 -2.39 -0.02 -0.68 16 Total: 0.00 -28.29 382.92 -0.68 -28.97 By element: Atomic # 1 Polarization: -26.85 SS G_CDS: -0.75 Total: -27.60 kcal Atomic # 6 Polarization: 4.35 SS G_CDS: 4.00 Total: 8.35 kcal Atomic # 7 Polarization: 4.94 SS G_CDS: -2.47 Total: 2.47 kcal Atomic # 8 Polarization: -10.07 SS G_CDS: -4.16 Total: -14.23 kcal Atomic # 9 Polarization: -0.76 SS G_CDS: 0.58 Total: -0.18 kcal Atomic # 14 Polarization: 0.10 SS G_CDS: 2.11 Total: 2.21 kcal Total: -28.29 -0.68 -28.97 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_12496548.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -148.550 kcal (2) G-P(sol) polarization free energy of solvation -28.285 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -176.836 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.684 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.970 kcal (6) G-S(sol) free energy of system = (1) + (5) -177.520 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds