Wall clock time and date at job start Sun Mar 7 2021 07:03:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.45199 * 109.47010 * 2 1 4 4 C 1.34225 * 116.99974 * 180.02562 * 3 2 1 5 5 O 1.20829 * 119.99927 * 359.97438 * 4 3 2 6 6 C 1.50699 * 120.00112 * 179.97438 * 4 3 2 7 7 H 1.09000 * 112.84775 * 48.80149 * 6 4 3 8 8 C 1.53781 * 113.61463 * 179.97438 * 6 4 3 9 9 C 1.53783 * 87.07994 * 140.06737 * 8 6 4 10 10 O 1.42901 * 113.61809 * 89.20158 * 9 8 6 11 11 C 1.53002 * 113.61404 * 220.02113 * 9 8 6 12 12 N 1.46499 * 109.47215 * 179.97438 * 11 9 8 13 13 C 1.34781 * 120.00040 * 179.97438 * 12 11 9 14 14 O 1.21628 * 119.99671 * 0.02562 * 13 12 11 15 15 C 1.47293 * 119.99895 * 180.02562 * 13 12 11 16 16 C 1.40365 * 120.04235 * 180.02562 * 15 13 12 17 17 O 1.35679 * 120.14174 * 0.02562 * 16 15 13 18 18 C 1.38327 * 119.72357 * 179.72549 * 16 15 13 19 19 C 1.39563 * 119.80855 * 0.52645 * 18 16 15 20 20 C 1.47569 * 119.95441 * 179.72634 * 19 18 16 21 21 C 1.36109 * 125.94733 * 179.72557 * 20 19 18 22 22 C 1.40795 * 106.73337 * 180.24168 * 21 20 19 23 23 C 1.34832 * 107.04964 * 359.60553 * 22 21 20 24 24 C 1.50703 * 125.65080 * 180.14040 * 23 22 21 25 25 O 1.42898 * 109.47270 * 65.27787 * 24 23 22 26 26 Si 1.86303 * 109.47105 * 185.27311 * 24 23 22 27 27 O 1.34226 * 108.69723 * 0.39803 * 23 22 21 28 28 C 1.39963 * 120.09136 * 359.45008 * 19 18 16 29 29 C 1.36384 * 120.27969 * 0.29363 * 28 19 18 30 30 C 1.53778 * 87.08187 * 334.56500 * 9 8 6 31 31 H 1.09005 * 109.47154 * 300.00027 * 1 2 3 32 32 H 1.08997 * 109.47265 * 60.00214 * 1 2 3 33 33 H 1.09000 * 109.47095 * 180.02562 * 1 2 3 34 34 H 1.08997 * 109.46926 * 239.99806 * 2 1 3 35 35 H 1.08997 * 109.47265 * 119.99786 * 2 1 3 36 36 H 1.08999 * 113.61823 * 25.52017 * 8 6 4 37 37 H 1.08996 * 113.61425 * 254.61316 * 8 6 4 38 38 H 0.96695 * 114.00026 * 181.53132 * 10 9 8 39 39 H 1.09000 * 109.47546 * 59.99721 * 11 9 8 40 40 H 1.09005 * 109.46768 * 299.99740 * 11 9 8 41 41 H 0.96996 * 119.99953 * 0.02562 * 12 11 9 42 42 H 0.96699 * 113.99887 * 90.00199 * 17 16 15 43 43 H 1.08001 * 120.09520 * 180.27322 * 18 16 15 44 44 H 1.08002 * 126.62860 * 359.97242 * 21 20 19 45 45 H 1.08005 * 126.47526 * 179.74314 * 22 21 20 46 46 H 1.08995 * 109.47549 * 305.27249 * 24 23 22 47 47 H 0.96702 * 114.00045 * 59.99417 * 25 24 23 48 48 H 1.48501 * 109.99680 * 58.68177 * 26 24 23 49 49 H 1.48500 * 110.00258 * 179.97438 * 26 24 23 50 50 H 1.08003 * 119.85708 * 180.27548 * 28 19 18 51 51 H 1.07994 * 119.90876 * 179.97438 * 29 28 19 52 52 H 1.09004 * 113.61339 * 139.98009 * 30 9 8 53 53 H 1.09001 * 113.61769 * 270.88645 * 30 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0807 0.5866 -0.0005 6 6 3.9207 2.9374 -0.0012 7 1 3.4713 3.5816 0.7546 8 6 5.4582 2.9681 -0.0011 9 6 5.3564 4.1435 -0.9875 10 8 5.2835 5.4207 -0.3506 11 6 6.3986 4.0964 -2.1067 12 7 6.2198 5.2518 -2.9894 13 6 7.0315 5.4200 -4.0522 14 8 7.9122 4.6122 -4.2785 15 6 6.8520 6.5819 -4.9394 16 6 7.6965 6.7577 -6.0467 17 8 8.6795 5.8583 -6.3034 18 6 7.5185 7.8482 -6.8788 19 6 6.5083 8.7716 -6.6057 20 6 6.3194 9.9395 -7.4878 21 6 5.3745 10.9079 -7.3400 22 6 5.5550 11.8157 -8.4010 23 6 6.5955 11.3675 -9.1321 24 6 7.1496 12.0278 -10.3682 25 8 7.7068 13.2971 -10.0212 26 14 8.4762 10.9485 -11.1072 27 8 7.0523 10.2326 -8.5797 28 6 5.6704 8.5885 -5.4996 29 6 5.8393 7.5118 -4.6798 30 6 3.9863 3.5784 -1.3975 31 1 -0.3634 0.5139 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 -0.3633 -1.0277 0.0005 34 1 1.8933 -0.5139 -0.8900 35 1 1.8934 -0.5138 0.8900 36 1 5.9128 2.0755 -0.4309 37 1 5.8894 3.2422 0.9617 38 1 5.1958 6.1621 -0.9651 39 1 6.2740 3.1783 -2.6808 40 1 7.3985 4.1211 -1.6733 41 1 5.5177 5.8962 -2.8087 42 1 8.4061 5.1301 -6.8778 43 1 8.1620 7.9869 -7.7350 44 1 4.6277 10.9661 -6.5620 45 1 4.9718 12.7046 -8.5917 46 1 6.3493 12.1687 -11.0947 47 1 8.4263 13.2479 -9.3770 48 1 7.9169 9.6145 -11.4431 49 1 9.0303 11.5882 -12.3274 50 1 4.8870 9.3031 -5.2944 51 1 5.1896 7.3766 -3.8278 52 1 3.2292 4.3451 -1.5620 53 1 4.0384 2.8526 -2.2091 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_12807986.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:03:18 Heat of formation + Delta-G solvation = -163.430883 kcal Electronic energy + Delta-G solvation = -38925.927145 eV Core-core repulsion = 33504.794678 eV Total energy + Delta-G solvation = -5421.132467 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.164 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -43.73355 -42.16971 -41.55530 -40.53723 -39.49193 -38.09423 -37.83397 -37.74960 -36.01144 -35.37637 -34.23743 -33.45441 -32.67635 -31.34047 -30.70142 -29.47907 -27.21594 -26.93607 -26.11808 -24.38918 -24.04819 -23.70235 -22.44413 -22.03477 -21.91512 -21.34328 -20.77354 -19.94397 -19.25125 -18.74701 -18.52421 -17.80632 -17.69558 -17.67252 -17.47407 -17.37393 -17.09980 -16.69044 -16.44446 -16.32074 -16.09810 -15.89373 -15.74689 -15.43139 -15.21562 -14.94125 -14.70265 -14.49030 -14.38111 -14.29216 -14.12882 -13.97746 -13.86963 -13.79738 -13.59355 -13.50578 -13.49325 -13.25298 -12.97841 -12.82547 -12.75397 -12.70157 -12.56927 -12.27828 -12.26309 -11.90228 -11.73819 -11.58105 -11.46128 -11.12244 -11.00622 -10.88398 -10.73053 -10.58484 -10.25410 -9.93916 -9.00693 -5.04995 -0.78755 0.16355 0.64942 1.04568 1.13308 1.40170 1.46273 1.60244 1.74288 1.86646 1.90546 1.93533 2.64821 2.85676 3.02896 3.11232 3.29192 3.35729 3.41725 3.44243 3.47203 3.62407 3.68792 3.88122 3.91063 3.95344 3.99983 4.02538 4.02877 4.21518 4.23050 4.30431 4.31677 4.33567 4.41356 4.59088 4.61508 4.67278 4.69974 4.71010 4.79351 4.80897 4.86975 4.88094 4.90425 4.91291 5.07135 5.10580 5.11774 5.13503 5.20273 5.23008 5.41500 5.43750 5.54976 5.97709 6.34435 6.59548 6.63485 6.64631 6.70342 7.10446 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.101 4.101 7 H 0.146 0.854 8 C -0.110 4.110 9 C 0.116 3.884 10 O -0.537 6.537 11 C 0.108 3.892 12 N -0.710 5.710 13 C 0.558 3.442 14 O -0.562 6.562 15 C -0.179 4.179 16 C 0.160 3.840 17 O -0.496 6.496 18 C -0.153 4.153 19 C 0.026 3.974 20 C 0.005 3.995 21 C -0.172 4.172 22 C -0.184 4.184 23 C -0.054 4.054 24 C -0.024 4.024 25 O -0.540 6.540 26 Si 0.766 3.234 27 O -0.175 6.175 28 C -0.109 4.109 29 C -0.049 4.049 30 C -0.135 4.135 31 H 0.069 0.931 32 H 0.070 0.930 33 H 0.095 0.905 34 H 0.067 0.933 35 H 0.066 0.934 36 H 0.103 0.897 37 H 0.092 0.908 38 H 0.393 0.607 39 H 0.077 0.923 40 H 0.067 0.933 41 H 0.413 0.587 42 H 0.408 0.592 43 H 0.138 0.862 44 H 0.183 0.817 45 H 0.165 0.835 46 H 0.139 0.861 47 H 0.399 0.601 48 H -0.295 1.295 49 H -0.278 1.278 50 H 0.171 0.829 51 H 0.177 0.823 52 H 0.115 0.885 53 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.397 4.674 1.500 8.878 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.314 3.686 5 O -0.430 6.430 6 C -0.120 4.120 7 H 0.163 0.837 8 C -0.147 4.147 9 C 0.074 3.926 10 O -0.345 6.345 11 C -0.016 4.016 12 N -0.366 5.366 13 C 0.347 3.653 14 O -0.441 6.441 15 C -0.183 4.183 16 C 0.114 3.886 17 O -0.309 6.309 18 C -0.172 4.172 19 C 0.025 3.975 20 C -0.045 4.045 21 C -0.190 4.190 22 C -0.203 4.203 23 C -0.104 4.104 24 C -0.134 4.134 25 O -0.349 6.349 26 Si 0.671 3.329 27 O -0.073 6.073 28 C -0.127 4.127 29 C -0.068 4.068 30 C -0.172 4.172 31 H 0.088 0.912 32 H 0.089 0.911 33 H 0.113 0.887 34 H 0.086 0.914 35 H 0.084 0.916 36 H 0.121 0.879 37 H 0.111 0.889 38 H 0.244 0.756 39 H 0.095 0.905 40 H 0.085 0.915 41 H 0.252 0.748 42 H 0.268 0.732 43 H 0.156 0.844 44 H 0.201 0.799 45 H 0.183 0.817 46 H 0.156 0.844 47 H 0.250 0.750 48 H -0.222 1.222 49 H -0.204 1.204 50 H 0.188 0.812 51 H 0.194 0.806 52 H 0.134 0.866 53 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -6.139 3.343 1.024 7.065 hybrid contribution -0.852 -0.135 -0.798 1.175 sum -6.991 3.208 0.226 7.695 Atomic orbital electron populations 1.21824 0.90623 1.04245 1.03802 1.23254 0.96985 0.79424 1.02413 1.86525 1.24266 1.33390 1.83383 1.24107 0.80537 0.93025 0.70967 1.90675 1.61185 1.44276 1.46822 1.22539 0.96822 0.89626 1.02993 0.83654 1.23077 0.93464 0.96992 1.01201 1.22073 0.93437 0.85405 0.91723 1.86598 1.96004 1.14770 1.37159 1.21857 0.99680 0.89497 0.90554 1.45568 1.35750 1.27918 1.27315 1.18225 0.81040 0.85082 0.80982 1.90849 1.34098 1.45974 1.73140 1.20472 1.00273 0.98466 0.99055 1.18513 0.86937 0.90664 0.92530 1.84735 1.34858 1.38768 1.72551 1.21587 0.99440 0.95261 1.00906 1.17968 0.95709 0.90252 0.93569 1.20610 0.95852 0.98381 0.89633 1.22246 1.01037 0.94091 1.01643 1.21839 0.99322 1.02632 0.96516 1.23214 0.99102 0.88021 1.00038 1.24397 1.05328 0.90404 0.93309 1.86532 1.55655 1.26347 1.66333 0.93356 0.83114 0.74367 0.82053 1.83924 1.50887 1.37291 1.35162 1.21076 0.99774 0.99201 0.92638 1.21184 0.94737 0.91408 0.99426 1.23669 0.98330 1.01163 0.94075 0.91229 0.91105 0.88653 0.91432 0.91564 0.87900 0.88920 0.75550 0.90481 0.91457 0.74771 0.73197 0.84378 0.79937 0.81734 0.84441 0.75008 1.22195 1.20407 0.81155 0.80571 0.86613 0.88671 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.61 10.29 71.98 0.74 1.35 16 2 C 0.05 0.04 6.19 71.98 0.45 0.48 16 3 O -0.36 -1.03 10.22 -51.36 -0.52 -1.55 16 4 C 0.47 1.76 7.49 71.24 0.53 2.30 16 5 O -0.54 -5.59 15.65 21.96 0.34 -5.24 16 6 C -0.10 0.29 4.19 -11.01 -0.05 0.24 16 7 H 0.15 -0.79 8.14 -2.39 -0.02 -0.81 16 8 C -0.11 0.20 6.80 31.12 0.21 0.41 16 9 C 0.12 -0.68 1.48 -10.27 -0.02 -0.69 16 10 O -0.54 3.79 13.40 -148.98 -2.00 1.79 16 11 C 0.11 -0.29 5.32 86.38 0.46 0.17 16 12 N -0.71 3.79 5.30 -466.48 -2.47 1.32 16 13 C 0.56 1.56 7.75 86.62 0.67 2.23 16 14 O -0.56 -6.94 15.14 16.88 0.26 -6.69 16 15 C -0.18 0.06 5.89 -19.97 -0.12 -0.05 16 16 C 0.16 0.53 6.71 22.81 0.15 0.69 16 17 O -0.50 -3.16 11.56 -68.97 -0.80 -3.96 16 18 C -0.15 -0.23 9.65 22.61 0.22 -0.01 16 19 C 0.03 -0.04 5.87 -20.08 -0.12 -0.16 16 20 C 0.00 0.00 7.02 24.24 0.17 0.17 16 21 C -0.17 0.49 10.26 22.40 0.23 0.72 16 22 C -0.18 0.19 10.78 22.11 0.24 0.43 16 23 C -0.05 -0.01 6.21 24.90 0.15 0.15 16 24 C -0.02 0.04 2.98 71.24 0.21 0.26 16 25 O -0.54 1.13 12.88 -148.98 -1.92 -0.79 16 26 Si 0.77 -0.93 32.11 68.60 2.20 1.28 16 27 O -0.17 -0.35 8.79 -6.02 -0.05 -0.40 16 28 C -0.11 0.83 9.48 22.26 0.21 1.04 16 29 C -0.05 0.42 9.47 22.24 0.21 0.63 16 30 C -0.13 0.97 7.02 31.12 0.22 1.19 16 31 H 0.07 -0.28 8.14 -2.38 -0.02 -0.30 16 32 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 33 H 0.09 -0.65 8.14 -2.39 -0.02 -0.66 16 34 H 0.07 0.08 8.13 -2.39 -0.02 0.06 16 35 H 0.07 0.10 8.13 -2.39 -0.02 0.08 16 36 H 0.10 0.07 7.39 -2.39 -0.02 0.05 16 37 H 0.09 -0.14 8.14 -2.39 -0.02 -0.16 16 38 H 0.39 -5.94 7.33 -74.06 -0.54 -6.49 16 39 H 0.08 -0.04 7.94 -2.39 -0.02 -0.06 16 40 H 0.07 0.09 8.14 -2.38 -0.02 0.07 16 41 H 0.41 -5.65 5.04 -92.71 -0.47 -6.12 16 42 H 0.41 -0.20 9.06 -74.06 -0.67 -0.87 16 43 H 0.14 0.22 7.90 -2.91 -0.02 0.19 16 44 H 0.18 -1.70 7.24 -2.91 -0.02 -1.72 16 45 H 0.17 -0.58 8.06 -2.91 -0.02 -0.60 16 46 H 0.14 -0.41 7.96 -2.39 -0.02 -0.43 16 47 H 0.40 -3.77 8.70 -74.06 -0.64 -4.42 16 48 H -0.29 -1.69 7.11 99.48 0.71 -0.98 16 49 H -0.28 -1.13 7.11 99.48 0.71 -0.42 16 50 H 0.17 -2.37 6.95 -2.91 -0.02 -2.39 16 51 H 0.18 -3.11 6.38 -2.91 -0.02 -3.13 16 52 H 0.12 -1.35 8.14 -2.38 -0.02 -1.37 16 53 H 0.09 -0.55 7.92 -2.39 -0.02 -0.57 16 Total: 0.00 -32.64 451.24 -1.45 -34.09 By element: Atomic # 1 Polarization: -30.11 SS G_CDS: -1.27 Total: -31.37 kcal Atomic # 6 Polarization: 6.75 SS G_CDS: 4.78 Total: 11.54 kcal Atomic # 7 Polarization: 3.79 SS G_CDS: -2.47 Total: 1.32 kcal Atomic # 8 Polarization: -12.16 SS G_CDS: -4.69 Total: -16.85 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: 2.20 Total: 1.28 kcal Total: -32.64 -1.45 -34.09 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_12807986.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -129.342 kcal (2) G-P(sol) polarization free energy of solvation -32.643 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -161.985 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.446 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.089 kcal (6) G-S(sol) free energy of system = (1) + (5) -163.431 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds