Wall clock time and date at job start Sun Mar 7 2021 07:03:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45199 * 109.47074 * 2 1 4 4 C 1.34229 * 117.00168 * 179.97438 * 3 2 1 5 5 O 1.20820 * 120.00129 * 0.02562 * 4 3 2 6 6 C 1.50705 * 120.00149 * 179.97438 * 4 3 2 7 7 H 1.08996 * 112.84997 * 309.67377 * 6 4 3 8 8 C 1.53782 * 113.61178 * 80.86927 * 6 4 3 9 9 C 1.53953 * 87.01933 * 139.95231 * 8 6 4 10 10 O 1.42900 * 113.53635 * 89.18754 * 9 8 6 11 11 C 1.52995 * 113.74338 * 220.05536 * 9 8 6 12 12 N 1.46506 * 109.47290 * 282.59797 * 11 9 8 13 13 C 1.34767 * 120.00181 * 179.97438 * 12 11 9 14 14 O 1.21578 * 120.00251 * 359.97438 * 13 12 11 15 15 C 1.47672 * 120.00218 * 179.97438 * 13 12 11 16 16 C 1.40006 * 120.45072 * 353.98915 * 15 13 12 17 17 N 1.31303 * 121.37723 * 179.97438 * 16 15 13 18 18 C 1.32818 * 121.89104 * 0.02562 * 17 16 15 19 19 N 1.37158 * 132.96782 * 179.97438 * 18 17 16 20 20 C 1.36948 * 110.11384 * 180.02562 * 19 18 17 21 21 C 1.34178 * 109.95312 * 0.02562 * 20 19 18 22 22 C 1.50698 * 126.59765 * 179.97438 * 21 20 19 23 23 O 1.42902 * 109.47143 * 105.02503 * 22 21 20 24 24 Si 1.86304 * 109.47168 * 345.02464 * 22 21 20 25 25 C 1.41018 * 120.08316 * 0.02562 * 18 17 16 26 26 C 1.39282 * 119.61730 * 359.71970 * 25 18 17 27 27 C 1.50703 * 121.03136 * 180.29829 * 26 25 18 28 28 C 1.53774 * 113.61420 * 178.47612 * 6 4 3 29 29 H 1.08998 * 109.46751 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47004 * 299.99630 * 1 2 3 31 31 H 1.08999 * 109.46808 * 59.99934 * 1 2 3 32 32 H 1.09004 * 109.47480 * 240.00445 * 2 1 3 33 33 H 1.09000 * 109.47325 * 120.00067 * 2 1 3 34 34 H 1.09000 * 113.61074 * 254.53076 * 8 6 4 35 35 H 1.08995 * 113.61421 * 25.42829 * 8 6 4 36 36 H 0.96697 * 114.00152 * 82.50395 * 10 9 8 37 37 H 1.09004 * 109.47361 * 42.59664 * 11 9 8 38 38 H 1.08993 * 109.47501 * 162.59910 * 11 9 8 39 39 H 0.97002 * 119.99676 * 0.02562 * 12 11 9 40 40 H 1.08004 * 119.30990 * 359.96879 * 16 15 13 41 41 H 0.97000 * 124.94398 * 359.96827 * 19 18 17 42 42 H 1.08004 * 125.02257 * 180.02562 * 20 19 18 43 43 H 1.09002 * 109.46849 * 225.02372 * 22 21 20 44 44 H 0.96704 * 113.99637 * 299.99736 * 23 22 21 45 45 H 1.48497 * 109.99739 * 180.02562 * 24 22 21 46 46 H 1.48500 * 109.99807 * 301.32047 * 24 22 21 47 47 H 1.08999 * 109.47122 * 263.92102 * 27 26 25 48 48 H 1.08996 * 109.47131 * 23.92674 * 27 26 25 49 49 H 1.09001 * 109.47010 * 143.92866 * 27 26 25 50 50 H 1.09002 * 113.61871 * 334.56525 * 28 6 4 51 51 H 1.09003 * 113.61604 * 105.38894 * 28 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5868 0.0005 6 6 3.9207 2.9375 0.0000 7 1 3.4903 3.5733 -0.7737 8 6 3.9488 3.5930 1.3908 9 6 5.3314 4.1533 1.0103 10 8 5.2726 5.4241 0.3593 11 6 6.3465 4.1183 2.1544 12 7 6.0704 5.2148 3.0860 13 6 6.8422 5.3817 4.1781 14 8 7.7673 4.6220 4.3906 15 6 6.5642 6.4873 5.1168 16 6 5.5835 7.4411 4.8192 17 7 5.3212 8.4312 5.6408 18 6 5.9692 8.5792 6.7907 19 7 5.8847 9.5054 7.7989 20 6 6.7872 9.2107 8.7859 21 6 7.4764 8.1062 8.4613 22 6 8.5609 7.4516 9.2776 23 8 8.0475 6.2661 9.8883 24 14 9.1405 8.6300 10.5991 25 6 6.9719 7.6593 7.1606 26 6 7.2734 6.5934 6.3163 27 6 8.3343 5.5878 6.6830 28 6 5.4577 2.9684 0.0382 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 1.8934 -0.5138 -0.8900 33 1 1.8934 -0.5138 0.8900 34 1 3.1877 4.3612 1.5269 35 1 3.9790 2.8757 2.2110 36 1 5.1931 6.1732 0.9654 37 1 6.2687 3.1666 2.6802 38 1 7.3528 4.2292 1.7509 39 1 5.3316 5.8203 2.9171 40 1 5.0314 7.3610 3.8945 41 1 5.2751 10.2598 7.8107 42 1 6.9239 9.7829 9.6917 43 1 9.3979 7.1929 8.6289 44 1 7.2989 6.4213 10.4805 45 1 10.2105 7.9964 11.4107 46 1 9.6474 9.8801 9.9781 47 1 9.2760 5.8636 6.2083 48 1 8.4633 5.5741 7.7652 49 1 8.0310 4.5984 6.3406 50 1 5.9013 2.0801 0.4879 51 1 5.9130 3.2318 -0.9165 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_12890568.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:03:25 Heat of formation + Delta-G solvation = -94.322663 kcal Electronic energy + Delta-G solvation = -36164.529006 eV Core-core repulsion = 31225.594380 eV Total energy + Delta-G solvation = -4938.934626 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.172 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.88945 -42.09103 -41.04215 -40.19416 -38.72555 -37.80340 -37.61746 -36.08077 -35.61569 -34.81717 -32.70746 -32.02780 -31.49097 -29.51340 -28.67954 -27.10917 -26.66714 -26.12239 -24.61234 -24.00483 -23.59157 -21.91802 -21.87313 -20.84275 -20.72200 -19.46597 -19.24820 -18.64234 -18.01448 -17.68198 -17.57521 -17.39544 -17.26004 -17.00724 -16.74428 -16.40400 -16.37222 -16.07161 -15.67227 -15.53961 -15.29096 -15.11723 -14.78277 -14.67559 -14.50924 -14.24573 -14.08903 -13.92727 -13.87958 -13.75732 -13.60079 -13.54943 -13.29213 -13.18751 -12.99031 -12.95579 -12.77917 -12.60392 -12.34766 -12.29793 -12.08416 -11.74730 -11.50683 -11.42083 -11.11128 -11.07525 -10.97854 -10.54139 -10.25689 -10.21713 -9.63713 -9.17661 -5.15172 -0.27656 -0.10102 1.18559 1.21467 1.34434 1.53501 1.61872 1.64203 1.86189 1.92589 1.93899 2.69168 2.81045 3.03821 3.19412 3.30938 3.37801 3.39538 3.41781 3.48662 3.57457 3.67503 3.72934 3.87405 3.95333 4.00924 4.05046 4.10045 4.18980 4.24270 4.29140 4.30171 4.47122 4.48324 4.51893 4.61271 4.65648 4.71317 4.73315 4.75765 4.80223 4.84588 4.92505 5.00891 5.01386 5.02464 5.14429 5.20963 5.40038 5.48323 5.52388 5.73923 6.05996 6.26198 6.34555 6.58065 6.77023 6.80656 7.13941 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.470 3.530 5 O -0.505 6.505 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.146 4.146 9 C 0.097 3.903 10 O -0.530 6.530 11 C 0.105 3.895 12 N -0.731 5.731 13 C 0.574 3.426 14 O -0.524 6.524 15 C -0.235 4.235 16 C 0.180 3.820 17 N -0.503 5.503 18 C 0.308 3.692 19 N -0.570 5.570 20 C 0.071 3.929 21 C -0.181 4.181 22 C -0.036 4.036 23 O -0.538 6.538 24 Si 0.687 3.313 25 C -0.149 4.149 26 C 0.086 3.914 27 C -0.135 4.135 28 C -0.100 4.100 29 H 0.081 0.919 30 H 0.067 0.933 31 H 0.067 0.933 32 H 0.071 0.929 33 H 0.071 0.929 34 H 0.091 0.909 35 H 0.098 0.902 36 H 0.378 0.622 37 H 0.086 0.914 38 H 0.084 0.916 39 H 0.395 0.605 40 H 0.161 0.839 41 H 0.426 0.574 42 H 0.187 0.813 43 H 0.116 0.884 44 H 0.378 0.622 45 H -0.252 1.252 46 H -0.255 1.255 47 H 0.081 0.919 48 H 0.085 0.915 49 H 0.098 0.902 50 H 0.114 0.886 51 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.319 4.621 3.558 7.894 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.392 6.392 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.183 4.183 9 C 0.055 3.945 10 O -0.336 6.336 11 C -0.018 4.018 12 N -0.385 5.385 13 C 0.362 3.638 14 O -0.400 6.400 15 C -0.242 4.242 16 C 0.011 3.989 17 N -0.216 5.216 18 C 0.075 3.925 19 N -0.175 5.175 20 C -0.056 4.056 21 C -0.188 4.188 22 C -0.148 4.148 23 O -0.343 6.343 24 Si 0.588 3.412 25 C -0.156 4.156 26 C 0.078 3.922 27 C -0.190 4.190 28 C -0.138 4.138 29 H 0.100 0.900 30 H 0.086 0.914 31 H 0.086 0.914 32 H 0.089 0.911 33 H 0.089 0.911 34 H 0.110 0.890 35 H 0.117 0.883 36 H 0.227 0.773 37 H 0.104 0.896 38 H 0.103 0.897 39 H 0.230 0.770 40 H 0.178 0.822 41 H 0.265 0.735 42 H 0.203 0.797 43 H 0.133 0.867 44 H 0.226 0.774 45 H -0.177 1.177 46 H -0.180 1.180 47 H 0.099 0.901 48 H 0.103 0.897 49 H 0.117 0.883 50 H 0.133 0.867 51 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -3.936 4.309 3.053 6.586 hybrid contribution -0.267 0.166 -0.186 0.366 sum -4.204 4.475 2.867 6.776 Atomic orbital electron populations 1.21820 0.92329 1.03262 1.03651 1.23092 0.95621 0.79878 1.02762 1.86518 1.24381 1.32728 1.83677 1.23535 0.80695 0.92315 0.72153 1.90687 1.60508 1.42924 1.45076 1.22419 0.97267 0.90939 1.01493 0.85002 1.23697 0.98246 1.00957 0.95434 1.22417 0.93799 0.85632 0.92627 1.86598 1.96169 1.14421 1.36412 1.21940 0.99682 0.91086 0.89112 1.45770 1.34439 1.33172 1.25136 1.17844 0.81749 0.83820 0.80365 1.90786 1.29869 1.45862 1.73530 1.20392 1.04510 1.00937 0.98385 1.22457 0.92533 0.87489 0.96410 1.66422 1.28528 1.23960 1.02641 1.18490 0.94146 0.90344 0.89549 1.41520 1.34772 1.25460 1.15752 1.21740 0.92009 0.98029 0.93789 1.20686 1.03365 0.98643 0.96148 1.24465 0.96317 0.93503 1.00477 1.86518 1.53123 1.30576 1.64104 0.95312 0.86685 0.77905 0.81347 1.19478 1.01077 0.97842 0.97181 1.19925 0.91777 0.91398 0.89112 1.21283 0.96074 0.98600 1.03066 1.23043 0.93291 0.96479 1.00944 0.90005 0.91381 0.91355 0.91068 0.91109 0.89009 0.88322 0.77336 0.89619 0.89739 0.76957 0.82231 0.73537 0.79673 0.86707 0.77447 1.17668 1.17955 0.90108 0.89663 0.88343 0.86742 0.88717 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.23 10.29 37.16 0.38 0.61 16 2 C 0.06 0.03 6.19 37.16 0.23 0.26 16 3 O -0.36 -0.64 10.22 -39.25 -0.40 -1.04 16 4 C 0.47 0.95 7.48 36.01 0.27 1.22 16 5 O -0.50 -2.42 15.66 -18.75 -0.29 -2.71 16 6 C -0.10 0.07 4.19 -90.96 -0.38 -0.31 16 7 H 0.13 -0.20 8.14 -51.93 -0.42 -0.62 16 8 C -0.15 0.34 7.03 -25.83 -0.18 0.16 16 9 C 0.10 -0.20 1.41 -89.72 -0.13 -0.33 16 10 O -0.53 1.04 13.41 -35.23 -0.47 0.57 16 11 C 0.11 -0.12 5.27 -4.04 -0.02 -0.15 16 12 N -0.73 1.25 5.27 -61.31 -0.32 0.92 16 13 C 0.57 1.01 7.72 -12.41 -0.10 0.91 16 14 O -0.52 -2.65 13.50 5.30 0.07 -2.58 16 15 C -0.23 -0.37 5.89 -104.82 -0.62 -0.99 16 16 C 0.18 0.01 10.67 -17.12 -0.18 -0.17 16 17 N -0.50 -0.89 10.37 -11.96 -0.12 -1.01 16 18 C 0.31 0.49 8.42 -155.71 -1.31 -0.82 16 19 N -0.57 0.92 6.04 -12.12 -0.07 0.85 16 20 C 0.07 -0.19 10.44 -16.70 -0.17 -0.37 16 21 C -0.18 0.07 5.57 -102.73 -0.57 -0.50 16 22 C -0.04 0.03 1.88 36.00 0.07 0.10 16 23 O -0.54 0.29 11.64 -35.23 -0.41 -0.12 16 24 Si 0.69 -1.72 30.77 -169.99 -5.23 -6.95 16 25 C -0.15 -0.30 6.16 -105.13 -0.65 -0.95 16 26 C 0.09 0.24 5.98 -103.67 -0.62 -0.38 16 27 C -0.13 -0.38 8.45 36.01 0.30 -0.08 16 28 C -0.10 0.08 6.79 -25.92 -0.18 -0.10 16 29 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 30 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 31 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 32 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 33 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 34 H 0.09 -0.33 8.14 -51.93 -0.42 -0.75 16 35 H 0.10 -0.19 8.00 -51.93 -0.42 -0.61 16 36 H 0.38 -2.00 7.60 45.56 0.35 -1.65 16 37 H 0.09 -0.04 8.06 -51.93 -0.42 -0.46 16 38 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 39 H 0.40 -1.85 5.41 -40.82 -0.22 -2.07 16 40 H 0.16 -0.64 6.43 -52.48 -0.34 -0.98 16 41 H 0.43 -1.78 8.96 -40.82 -0.37 -2.14 16 42 H 0.19 -1.26 6.36 -52.48 -0.33 -1.59 16 43 H 0.12 0.02 7.15 -51.93 -0.37 -0.35 16 44 H 0.38 -1.70 8.70 45.56 0.40 -1.30 16 45 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 46 H -0.25 0.01 7.11 56.52 0.40 0.41 16 47 H 0.08 0.24 8.14 -51.93 -0.42 -0.19 16 48 H 0.08 0.22 4.80 -51.93 -0.25 -0.03 16 49 H 0.10 0.41 5.96 -51.93 -0.31 0.10 16 50 H 0.11 -0.02 7.41 -51.93 -0.38 -0.41 16 51 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 LS Contribution 417.14 15.07 6.29 6.29 Total: 0.00 -12.67 417.14 -10.91 -23.58 By element: Atomic # 1 Polarization: -9.82 SS G_CDS: -6.09 Total: -15.91 kcal Atomic # 6 Polarization: 1.97 SS G_CDS: -3.85 Total: -1.89 kcal Atomic # 7 Polarization: 1.28 SS G_CDS: -0.52 Total: 0.76 kcal Atomic # 8 Polarization: -4.38 SS G_CDS: -1.51 Total: -5.88 kcal Atomic # 14 Polarization: -1.72 SS G_CDS: -5.23 Total: -6.95 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -12.67 -10.91 -23.58 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_12890568.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.741 kcal (2) G-P(sol) polarization free energy of solvation -12.671 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.411 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.911 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.582 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.323 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds