Wall clock time and date at job start Sun Mar 7 2021 07:03:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.45201 * 109.46746 * 2 1 4 4 C 1.34235 * 116.99704 * 179.97438 * 3 2 1 5 5 O 1.20826 * 119.99996 * 359.97438 * 4 3 2 6 6 C 1.50697 * 119.99722 * 180.02562 * 4 3 2 7 7 H 1.08997 * 112.85047 * 311.19488 * 6 4 3 8 8 C 1.53777 * 113.69352 * 82.46556 * 6 4 3 9 9 C 1.53784 * 87.08441 * 139.99299 * 8 6 4 10 10 O 1.42892 * 113.69257 * 89.12502 * 9 8 6 11 11 C 1.52996 * 113.61315 * 220.02408 * 9 8 6 12 12 N 1.46504 * 109.46681 * 282.48944 * 11 9 8 13 13 C 1.34777 * 119.99854 * 179.97438 * 12 11 9 14 14 O 1.21653 * 119.99992 * 0.02562 * 13 12 11 15 15 C 1.47058 * 119.99966 * 180.27718 * 13 12 11 16 16 C 1.35863 * 125.42589 * 179.41864 * 15 13 12 17 17 C 1.41593 * 107.72949 * 179.90388 * 16 15 13 18 18 C 1.40063 * 133.38533 * 180.12052 * 17 16 15 19 19 C 1.36470 * 119.83292 * 180.26517 * 18 17 16 20 20 C 1.38898 * 120.61321 * 359.97115 * 19 18 17 21 21 C 1.50702 * 119.67561 * 180.02562 * 20 19 18 22 22 O 1.42900 * 109.46986 * 245.00332 * 21 20 19 23 23 Si 1.86304 * 109.47147 * 5.00083 * 21 20 19 24 24 C 1.37705 * 120.65121 * 0.05129 * 20 19 18 25 25 C 1.39186 * 119.80643 * 359.95313 * 24 20 19 26 26 N 1.37494 * 133.18267 * 180.02562 * 25 24 20 27 27 C 1.53781 * 113.61342 * 180.02562 * 6 4 3 28 28 H 1.08998 * 109.47003 * 299.99889 * 1 2 3 29 29 H 1.08998 * 109.46939 * 60.00414 * 1 2 3 30 30 H 1.09002 * 109.46626 * 180.02562 * 1 2 3 31 31 H 1.08998 * 109.47003 * 240.00111 * 2 1 3 32 32 H 1.08998 * 109.46939 * 119.99586 * 2 1 3 33 33 H 1.08995 * 113.61857 * 25.44147 * 8 6 4 34 34 H 1.09004 * 113.61463 * 254.54138 * 8 6 4 35 35 H 0.96701 * 114.00200 * 80.93750 * 10 9 8 36 36 H 1.08998 * 109.47328 * 162.49276 * 11 9 8 37 37 H 1.08997 * 109.47540 * 42.49023 * 11 9 8 38 38 H 0.97000 * 120.00410 * 0.02562 * 12 11 9 39 39 H 1.08002 * 126.13566 * 0.04158 * 16 15 13 40 40 H 1.08005 * 120.08128 * 0.27804 * 18 17 16 41 41 H 1.08001 * 119.69468 * 180.02562 * 19 18 17 42 42 H 1.08997 * 109.47509 * 125.00502 * 21 20 19 43 43 H 0.96700 * 114.00159 * 59.99850 * 22 21 20 44 44 H 1.48499 * 110.00198 * 180.02562 * 23 21 20 45 45 H 1.48501 * 109.99895 * 301.31976 * 23 21 20 46 46 H 1.08001 * 120.09725 * 179.97438 * 24 20 19 47 47 H 0.96996 * 125.61033 * 359.97427 * 26 25 24 48 48 H 1.09004 * 113.61855 * 105.38414 * 27 6 4 49 49 H 1.08998 * 113.68839 * 334.49285 * 27 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0015 6 6 3.9206 2.9375 0.0012 7 1 3.4713 3.5817 -0.7546 8 6 3.9856 3.5787 1.3974 9 6 5.3560 4.1439 0.9878 10 8 5.2832 5.4208 0.3507 11 6 6.3977 4.0969 2.1074 12 7 6.1447 5.1847 3.0556 13 6 6.9422 5.3403 4.1309 14 8 7.8724 4.5779 4.3138 15 6 6.6847 6.4285 5.0860 16 6 7.4084 6.6791 6.2082 17 6 6.8385 7.8077 6.8457 18 6 7.1528 8.5136 8.0139 19 6 6.3952 9.5869 8.3831 20 6 5.3130 9.9882 7.6104 21 6 4.4911 11.1769 8.0377 22 8 3.1658 10.7491 8.3583 23 14 5.2693 11.9637 9.5364 24 6 4.9835 9.3104 6.4579 25 6 5.7411 8.2124 6.0604 26 7 5.6644 7.3548 4.9885 27 6 5.4581 2.9682 0.0011 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 1.8933 -0.5138 -0.8900 32 1 1.8933 -0.5138 0.8900 33 1 4.0375 2.8532 2.2091 34 1 3.2284 4.3454 1.5614 35 1 5.1953 6.1625 0.9649 36 1 7.3944 4.2108 1.6813 37 1 6.3313 3.1403 2.6256 38 1 5.4029 5.7924 2.9100 39 1 8.2660 6.1194 6.5512 40 1 7.9928 8.2093 8.6208 41 1 6.6398 10.1299 9.2841 42 1 4.4520 11.9026 7.2253 43 1 3.1243 10.1010 9.0748 44 1 4.4678 13.1368 9.9682 45 1 5.3574 10.9750 10.6410 46 1 4.1400 9.6299 5.8640 47 1 5.0028 7.3937 4.2803 48 1 5.8894 3.2423 -0.9617 49 1 5.9140 2.0761 0.4305 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_13158378.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:03:35 Heat of formation + Delta-G solvation = -107.448369 kcal Electronic energy + Delta-G solvation = -33133.603572 eV Core-core repulsion = 28415.063303 eV Total energy + Delta-G solvation = -4718.540269 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.161 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -42.78421 -42.16399 -40.94578 -40.10754 -39.03267 -37.69884 -37.02164 -36.15889 -35.63336 -33.35763 -32.76003 -31.47280 -30.48686 -29.83022 -27.34009 -27.07775 -26.10191 -24.40231 -23.78693 -23.12686 -22.09272 -21.98881 -21.37615 -20.94635 -20.01072 -18.83512 -18.57227 -17.97776 -17.94286 -17.73894 -17.47313 -16.96640 -16.93775 -16.73065 -16.30867 -16.26390 -15.78480 -15.60314 -15.49925 -15.14088 -15.00990 -14.85504 -14.75074 -14.54275 -14.44238 -14.31087 -14.04730 -13.96229 -13.70161 -13.38277 -13.19222 -13.04356 -12.88708 -12.68138 -12.62166 -12.59403 -12.45004 -12.07361 -11.90135 -11.58687 -11.56801 -11.53690 -11.36960 -11.10442 -10.99809 -10.65106 -10.49651 -9.39449 -8.89192 -4.96402 -0.41184 0.46623 0.92526 1.10565 1.25023 1.53737 1.58964 1.65675 1.75531 1.95868 2.16118 2.56163 2.71414 2.91680 3.14317 3.23732 3.28032 3.31969 3.48378 3.55599 3.65580 3.78580 3.90111 3.95172 3.95419 3.99731 4.15566 4.17401 4.22866 4.24433 4.35171 4.37407 4.39535 4.43054 4.52318 4.57840 4.60917 4.67195 4.73524 4.75594 4.83415 4.90213 4.91361 4.93669 4.97067 5.25598 5.34262 5.41768 5.46839 5.54596 5.88296 6.02235 6.17162 6.21601 6.35657 6.69709 6.83682 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.470 3.530 5 O -0.504 6.504 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.146 4.146 9 C 0.096 3.904 10 O -0.528 6.528 11 C 0.104 3.896 12 N -0.731 5.731 13 C 0.588 3.412 14 O -0.511 6.511 15 C 0.011 3.989 16 C -0.096 4.096 17 C -0.117 4.117 18 C -0.050 4.050 19 C -0.147 4.147 20 C -0.084 4.084 21 C -0.075 4.075 22 O -0.530 6.530 23 Si 0.691 3.309 24 C -0.104 4.104 25 C 0.117 3.883 26 N -0.579 5.579 27 C -0.099 4.099 28 H 0.067 0.933 29 H 0.068 0.932 30 H 0.082 0.918 31 H 0.071 0.929 32 H 0.071 0.929 33 H 0.099 0.901 34 H 0.090 0.910 35 H 0.376 0.624 36 H 0.088 0.912 37 H 0.089 0.911 38 H 0.392 0.608 39 H 0.159 0.841 40 H 0.132 0.868 41 H 0.130 0.870 42 H 0.119 0.881 43 H 0.377 0.623 44 H -0.258 1.258 45 H -0.260 1.260 46 H 0.127 0.873 47 H 0.416 0.584 48 H 0.095 0.905 49 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.362 2.824 -0.229 3.689 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.391 6.391 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.184 4.184 9 C 0.054 3.946 10 O -0.334 6.334 11 C -0.019 4.019 12 N -0.384 5.384 13 C 0.374 3.626 14 O -0.385 6.385 15 C -0.098 4.098 16 C -0.123 4.123 17 C -0.121 4.121 18 C -0.069 4.069 19 C -0.166 4.166 20 C -0.087 4.087 21 C -0.185 4.185 22 O -0.337 6.337 23 Si 0.592 3.408 24 C -0.125 4.125 25 C 0.007 3.993 26 N -0.184 5.184 27 C -0.137 4.137 28 H 0.086 0.914 29 H 0.087 0.913 30 H 0.100 0.900 31 H 0.090 0.910 32 H 0.089 0.911 33 H 0.117 0.883 34 H 0.109 0.891 35 H 0.224 0.776 36 H 0.106 0.894 37 H 0.107 0.893 38 H 0.226 0.774 39 H 0.177 0.823 40 H 0.150 0.850 41 H 0.147 0.853 42 H 0.136 0.864 43 H 0.224 0.776 44 H -0.183 1.183 45 H -0.184 1.184 46 H 0.145 0.855 47 H 0.254 0.746 48 H 0.114 0.886 49 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -1.746 2.125 -0.436 2.785 hybrid contribution -1.709 -0.440 0.139 1.770 sum -3.456 1.685 -0.296 3.856 Atomic orbital electron populations 1.21824 0.92294 1.03310 1.03649 1.23102 0.95647 0.79796 1.02800 1.86518 1.24330 1.32815 1.83654 1.23495 0.80738 0.92260 0.72218 1.90692 1.60507 1.42884 1.45016 1.22403 0.97286 0.91123 1.01275 0.84993 1.23675 0.98127 1.01047 0.95548 1.22406 0.93656 0.85587 0.92942 1.86622 1.96037 1.14422 1.36298 1.22015 0.99925 0.91065 0.88925 1.45759 1.33096 1.33676 1.25905 1.17154 0.82202 0.83187 0.80023 1.90910 1.29586 1.43755 1.74232 1.20016 0.94568 0.95237 0.99977 1.20997 1.00710 0.97104 0.93488 1.18229 0.97806 0.98577 0.97514 1.20387 0.98720 0.93687 0.94060 1.20544 0.96648 0.98646 1.00744 1.19976 0.96472 0.97377 0.94826 1.25051 0.86004 0.97403 1.10025 1.86603 1.25450 1.63935 1.57687 0.94792 0.88477 0.80757 0.76744 1.19869 1.00153 0.94543 0.97890 1.18302 0.97984 0.93874 0.89161 1.41858 1.27600 1.26022 1.22946 1.23055 0.93262 0.96489 1.00884 0.91405 0.91332 0.89953 0.91012 0.91090 0.88252 0.89141 0.77563 0.89411 0.89324 0.77376 0.82325 0.84985 0.85260 0.86354 0.77558 1.18349 1.18441 0.85524 0.74606 0.88600 0.86601 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.27 10.29 37.16 0.38 0.65 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.49 10.22 -39.27 -0.40 -0.89 16 4 C 0.47 0.72 7.49 36.00 0.27 0.99 16 5 O -0.50 -2.17 15.65 -18.75 -0.29 -2.46 16 6 C -0.10 0.13 4.19 -90.96 -0.38 -0.25 16 7 H 0.13 -0.28 8.14 -51.93 -0.42 -0.70 16 8 C -0.15 0.45 7.02 -25.92 -0.18 0.26 16 9 C 0.10 -0.27 1.41 -89.78 -0.13 -0.40 16 10 O -0.53 1.45 13.41 -35.23 -0.47 0.97 16 11 C 0.10 -0.21 5.26 -4.04 -0.02 -0.23 16 12 N -0.73 1.98 5.33 -61.50 -0.33 1.66 16 13 C 0.59 0.47 7.80 -12.68 -0.10 0.37 16 14 O -0.51 -2.44 16.84 5.23 0.09 -2.35 16 15 C 0.01 0.00 6.97 -82.29 -0.57 -0.57 16 16 C -0.10 -0.11 10.53 -39.15 -0.41 -0.52 16 17 C -0.12 -0.10 6.16 -106.93 -0.66 -0.76 16 18 C -0.05 0.02 10.06 -39.54 -0.40 -0.38 16 19 C -0.15 0.13 8.59 -39.98 -0.34 -0.21 16 20 C -0.08 0.06 5.36 -104.57 -0.56 -0.50 16 21 C -0.08 0.08 2.79 36.01 0.10 0.19 16 22 O -0.53 -0.19 12.83 -35.23 -0.45 -0.64 16 23 Si 0.69 -1.11 29.85 -169.99 -5.07 -6.18 16 24 C -0.10 0.05 9.69 -39.42 -0.38 -0.33 16 25 C 0.12 0.00 7.25 -83.97 -0.61 -0.61 16 26 N -0.58 1.11 6.07 -7.35 -0.04 1.06 16 27 C -0.10 0.14 6.80 -25.90 -0.18 -0.03 16 28 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 29 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 30 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 31 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 32 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 33 H 0.10 -0.26 7.99 -51.93 -0.41 -0.68 16 34 H 0.09 -0.39 8.14 -51.93 -0.42 -0.81 16 35 H 0.38 -2.32 7.62 45.56 0.35 -1.97 16 36 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 37 H 0.09 -0.11 8.05 -51.93 -0.42 -0.53 16 38 H 0.39 -2.30 6.38 -40.82 -0.26 -2.56 16 39 H 0.16 0.09 8.06 -52.49 -0.42 -0.33 16 40 H 0.13 -0.29 8.06 -52.48 -0.42 -0.71 16 41 H 0.13 -0.32 4.78 -52.49 -0.25 -0.57 16 42 H 0.12 -0.23 7.96 -51.93 -0.41 -0.64 16 43 H 0.38 -0.86 8.70 45.56 0.40 -0.46 16 44 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 45 H -0.26 -0.08 7.00 56.52 0.40 0.31 16 46 H 0.13 -0.19 8.06 -52.49 -0.42 -0.62 16 47 H 0.42 -2.19 8.12 -40.82 -0.33 -2.52 16 48 H 0.10 -0.13 8.14 -51.93 -0.42 -0.55 16 49 H 0.12 -0.10 7.40 -51.93 -0.38 -0.49 16 LS Contribution 412.57 15.07 6.22 6.22 Total: 0.00 -10.95 412.57 -10.71 -21.66 By element: Atomic # 1 Polarization: -10.95 SS G_CDS: -6.01 Total: -16.95 kcal Atomic # 6 Polarization: 1.85 SS G_CDS: -3.94 Total: -2.09 kcal Atomic # 7 Polarization: 3.09 SS G_CDS: -0.37 Total: 2.72 kcal Atomic # 8 Polarization: -3.84 SS G_CDS: -1.53 Total: -5.37 kcal Atomic # 14 Polarization: -1.11 SS G_CDS: -5.07 Total: -6.18 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -10.95 -10.71 -21.66 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_13158378.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.792 kcal (2) G-P(sol) polarization free energy of solvation -10.950 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.742 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.706 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.657 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.448 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds