Wall clock time and date at job start Sun Mar 7 2021 07:03:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 O 1.45201 * 109.46825 * 2 1 4 4 C 1.34232 * 116.99887 * 180.02562 * 3 2 1 5 5 O 1.20827 * 119.99770 * 359.97438 * 4 3 2 6 6 C 1.50705 * 119.99926 * 179.97438 * 4 3 2 7 7 H 1.08998 * 112.84897 * 311.19270 * 6 4 3 8 8 C 1.53780 * 113.68618 * 82.46326 * 6 4 3 9 9 C 1.53788 * 87.08059 * 139.99436 * 8 6 4 10 10 O 1.42897 * 113.69104 * 89.12095 * 9 8 6 11 11 C 1.53003 * 113.61231 * 220.02022 * 9 8 6 12 12 N 1.46496 * 109.46732 * 282.48929 * 11 9 8 13 13 C 1.34781 * 120.00019 * 180.02562 * 12 11 9 14 14 O 1.21586 * 119.99625 * 0.02562 * 13 12 11 15 15 C 1.47649 * 120.00408 * 180.02562 * 13 12 11 16 16 C 1.40166 * 119.97038 * 359.97438 * 15 13 12 17 17 C 1.36358 * 120.66932 * 179.97438 * 16 15 13 18 18 C 1.39335 * 120.23425 * 359.75957 * 17 16 15 19 19 N 1.37394 * 133.24558 * 179.56965 * 18 17 16 20 20 C 1.36866 * 109.97890 * 180.45806 * 19 18 17 21 21 C 1.34196 * 109.96795 * 0.27239 * 20 19 18 22 22 C 1.50696 * 126.53852 * 180.02562 * 21 20 19 23 23 O 1.42900 * 109.47049 * 104.97457 * 22 21 20 24 24 Si 1.86300 * 109.47430 * 344.97235 * 22 21 20 25 25 C 1.40910 * 119.63919 * 0.54017 * 18 17 16 26 26 C 1.39187 * 119.97654 * 180.02562 * 15 13 12 27 27 C 1.53779 * 113.61264 * 179.97438 * 6 4 3 28 28 H 1.09004 * 109.47039 * 180.02562 * 1 2 3 29 29 H 1.08999 * 109.47905 * 300.00421 * 1 2 3 30 30 H 1.09004 * 109.47072 * 60.00680 * 1 2 3 31 31 H 1.08993 * 109.47656 * 239.99914 * 2 1 3 32 32 H 1.09004 * 109.47072 * 119.99320 * 2 1 3 33 33 H 1.08995 * 113.62039 * 25.44076 * 8 6 4 34 34 H 1.09002 * 113.61583 * 254.53784 * 8 6 4 35 35 H 0.96705 * 113.99304 * 80.94339 * 10 9 8 36 36 H 1.09001 * 109.46501 * 162.49383 * 11 9 8 37 37 H 1.08997 * 109.47252 * 42.49019 * 11 9 8 38 38 H 0.96999 * 120.00172 * 0.02562 * 12 11 9 39 39 H 1.08002 * 119.67044 * 0.02562 * 16 15 13 40 40 H 1.07992 * 119.88237 * 180.02562 * 17 16 15 41 41 H 0.97001 * 125.01333 * 0.73322 * 19 18 17 42 42 H 1.08001 * 125.01438 * 180.22937 * 20 19 18 43 43 H 1.09002 * 109.47112 * 224.97043 * 22 21 20 44 44 H 0.96702 * 113.99747 * 299.99668 * 23 22 21 45 45 H 1.48503 * 109.99939 * 58.68071 * 24 22 21 46 46 H 1.48499 * 109.99970 * 179.97438 * 24 22 21 47 47 H 1.08003 * 120.30024 * 359.97438 * 26 15 13 48 48 H 1.09000 * 113.60870 * 105.38635 * 27 6 4 49 49 H 1.08995 * 113.61473 * 334.48719 * 27 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5449 -0.0005 5 8 4.0806 0.5867 -0.0005 6 6 3.9206 2.9376 -0.0012 7 1 3.4708 3.5813 -0.7570 8 6 3.9865 3.5794 1.3947 9 6 5.3566 4.1444 0.9839 10 8 5.2834 5.4210 0.3460 11 6 6.3991 4.0981 2.1028 12 7 6.1468 5.1863 3.0506 13 6 6.9456 5.3433 4.1247 14 8 7.8759 4.5819 4.3068 15 6 6.6911 6.4397 5.0803 16 6 5.6187 7.3174 4.8695 17 6 5.3703 8.3345 5.7431 18 6 6.1802 8.5109 6.8631 19 7 6.1817 9.4247 7.8891 20 6 7.2134 9.1608 8.7488 21 6 7.9065 8.0949 8.3194 22 6 9.1134 7.4829 8.9827 23 8 8.7353 6.2668 9.6308 24 14 9.7988 8.6713 10.2431 25 6 7.2652 7.6391 7.0828 26 6 7.5167 6.6016 6.1891 27 6 5.4581 2.9683 -0.0011 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3635 0.5139 0.8899 30 1 -0.3633 0.5137 -0.8901 31 1 1.8933 -0.5138 -0.8899 32 1 1.8933 -0.5137 0.8901 33 1 4.0389 2.8543 2.2068 34 1 3.2295 4.3463 1.5589 35 1 5.1959 6.1630 0.9601 36 1 7.3955 4.2118 1.6759 37 1 6.3330 3.1418 2.6217 38 1 5.4048 5.7940 2.9051 39 1 4.9823 7.1863 4.0068 40 1 4.5404 9.0030 5.5685 41 1 5.5433 10.1478 7.9913 42 1 7.4371 9.7271 9.6408 43 1 9.8737 7.2726 8.2305 44 1 8.0603 6.3787 10.3141 45 1 8.7615 8.9909 11.2566 46 1 10.9891 8.0792 10.9048 47 1 8.3444 5.9279 6.3552 48 1 5.8893 3.2415 -0.9642 49 1 5.9126 2.0761 0.4295 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_13287722.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:03:51 Heat of formation + Delta-G solvation = -113.532027 kcal Electronic energy + Delta-G solvation = -33329.985802 eV Core-core repulsion = 28611.181726 eV Total energy + Delta-G solvation = -4718.804076 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.161 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -42.46658 -42.13616 -41.06440 -40.13545 -38.06172 -37.77895 -37.47653 -36.00838 -35.43129 -33.28094 -32.69178 -31.27870 -30.59930 -29.29333 -27.01993 -26.51164 -26.41788 -24.51983 -23.66699 -23.47980 -21.95121 -21.67425 -20.84432 -20.76955 -19.50305 -19.06690 -18.64916 -17.83832 -17.76929 -17.49717 -17.38103 -17.13659 -16.96143 -16.51308 -16.20109 -16.09856 -15.64801 -15.60495 -15.26587 -15.11509 -14.92977 -14.79080 -14.74790 -14.45917 -14.22797 -14.07977 -13.81296 -13.74546 -13.58287 -13.48467 -13.28712 -12.98798 -12.79826 -12.58924 -12.57729 -12.51020 -12.28851 -12.13870 -11.80221 -11.75443 -11.58933 -11.48980 -11.13187 -10.91175 -10.79803 -10.48280 -10.31847 -9.32556 -8.80833 -4.87096 -0.15756 0.21697 1.03571 1.35184 1.52148 1.59468 1.61123 1.81372 1.96001 2.02271 2.13112 2.84407 2.89854 3.10510 3.35832 3.42781 3.47031 3.52102 3.63591 3.73113 3.84467 3.89765 3.92179 3.94583 4.02269 4.14667 4.20683 4.29644 4.31609 4.38349 4.46915 4.53901 4.58090 4.60883 4.65426 4.68891 4.79428 4.81441 4.86258 4.87476 4.90291 5.01716 5.10200 5.12529 5.20613 5.27789 5.35009 5.40542 5.49726 5.58542 5.99313 6.38262 6.55892 6.62236 6.62609 6.64466 7.11425 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.100 4.100 7 H 0.147 0.853 8 C -0.136 4.136 9 C 0.116 3.884 10 O -0.537 6.537 11 C 0.107 3.893 12 N -0.708 5.708 13 C 0.562 3.438 14 O -0.587 6.587 15 C -0.178 4.178 16 C -0.065 4.065 17 C -0.124 4.124 18 C 0.112 3.888 19 N -0.571 5.571 20 C 0.081 3.919 21 C -0.218 4.218 22 C -0.063 4.063 23 O -0.558 6.558 24 Si 0.787 3.213 25 C -0.128 4.128 26 C -0.023 4.023 27 C -0.109 4.109 28 H 0.095 0.905 29 H 0.070 0.930 30 H 0.069 0.931 31 H 0.066 0.934 32 H 0.066 0.934 33 H 0.093 0.907 34 H 0.116 0.884 35 H 0.394 0.606 36 H 0.068 0.932 37 H 0.073 0.927 38 H 0.415 0.585 39 H 0.166 0.834 40 H 0.164 0.836 41 H 0.439 0.561 42 H 0.208 0.792 43 H 0.099 0.901 44 H 0.384 0.616 45 H -0.259 1.259 46 H -0.312 1.312 47 H 0.105 0.895 48 H 0.094 0.906 49 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.589 10.852 1.188 13.891 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.275 6.275 4 C 0.314 3.686 5 O -0.430 6.430 6 C -0.118 4.118 7 H 0.165 0.835 8 C -0.173 4.173 9 C 0.074 3.926 10 O -0.345 6.345 11 C -0.018 4.018 12 N -0.363 5.363 13 C 0.352 3.648 14 O -0.469 6.469 15 C -0.183 4.183 16 C -0.084 4.084 17 C -0.144 4.144 18 C 0.002 3.998 19 N -0.174 5.174 20 C -0.047 4.047 21 C -0.225 4.225 22 C -0.171 4.171 23 O -0.366 6.366 24 Si 0.690 3.310 25 C -0.132 4.132 26 C -0.042 4.042 27 C -0.147 4.147 28 H 0.114 0.886 29 H 0.089 0.911 30 H 0.088 0.912 31 H 0.085 0.915 32 H 0.085 0.915 33 H 0.111 0.889 34 H 0.135 0.865 35 H 0.245 0.755 36 H 0.087 0.913 37 H 0.091 0.909 38 H 0.254 0.746 39 H 0.183 0.817 40 H 0.181 0.819 41 H 0.280 0.720 42 H 0.225 0.775 43 H 0.117 0.883 44 H 0.233 0.767 45 H -0.184 1.184 46 H -0.240 1.240 47 H 0.123 0.877 48 H 0.112 0.888 49 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -7.195 9.650 1.212 12.098 hybrid contribution -0.808 -0.978 0.781 1.490 sum -8.003 8.672 1.993 11.968 Atomic orbital electron populations 1.21822 0.90564 1.04264 1.03815 1.23259 0.97031 0.79422 1.02401 1.86526 1.24228 1.33398 1.83387 1.24106 0.80551 0.93013 0.70958 1.90674 1.61199 1.44280 1.46823 1.22532 0.96782 0.89630 1.02889 0.83501 1.23655 0.98362 1.01184 0.94145 1.22048 0.93366 0.85498 0.91660 1.86579 1.95989 1.14750 1.37168 1.21865 0.99510 0.91020 0.89370 1.45525 1.33087 1.33182 1.24470 1.18498 0.81192 0.83890 0.81213 1.90793 1.32627 1.47343 1.76105 1.19520 1.01298 0.99719 0.97734 1.20901 0.95141 0.92678 0.99728 1.20094 1.01009 1.00842 0.92458 1.18669 0.97181 0.91757 0.92167 1.41765 1.27848 1.27737 1.20082 1.22163 0.88693 0.97375 0.96431 1.20757 1.02552 1.01095 0.98061 1.24759 0.96631 0.92589 1.03088 1.86601 1.62359 1.31920 1.55683 0.94106 0.76843 0.83406 0.76636 1.19167 0.98554 0.98055 0.97457 1.20601 0.97094 0.94781 0.91765 1.23060 0.93512 0.96885 1.01207 0.88621 0.91132 0.91168 0.91517 0.91514 0.88887 0.86537 0.75468 0.91342 0.90909 0.74623 0.81693 0.81853 0.71967 0.77514 0.88274 0.76707 1.18418 1.24027 0.87686 0.88767 0.88010 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.49 10.29 71.98 0.74 1.23 16 2 C 0.05 0.09 6.19 71.98 0.45 0.53 16 3 O -0.36 -1.42 10.22 -51.44 -0.53 -1.94 16 4 C 0.47 2.37 7.49 71.24 0.53 2.90 16 5 O -0.54 -6.31 15.65 21.96 0.34 -5.97 16 6 C -0.10 0.15 4.19 -11.01 -0.05 0.10 16 7 H 0.15 -0.64 8.14 -2.39 -0.02 -0.66 16 8 C -0.14 0.72 7.02 31.12 0.22 0.94 16 9 C 0.12 -0.45 1.41 -10.27 -0.01 -0.46 16 10 O -0.54 2.82 13.41 -148.98 -2.00 0.82 16 11 C 0.11 0.02 5.26 86.38 0.45 0.47 16 12 N -0.71 1.33 5.28 -466.15 -2.46 -1.13 16 13 C 0.56 4.09 7.76 86.73 0.67 4.77 16 14 O -0.59 -10.44 16.33 -3.99 -0.07 -10.50 16 15 C -0.18 -0.77 5.87 -20.10 -0.12 -0.89 16 16 C -0.06 0.29 9.46 22.30 0.21 0.50 16 17 C -0.12 0.69 10.00 22.10 0.22 0.91 16 18 C 0.11 -0.17 7.27 39.19 0.28 0.12 16 19 N -0.57 4.11 6.05 -187.47 -1.13 2.97 16 20 C 0.08 -0.47 10.43 82.98 0.87 0.39 16 21 C -0.22 -0.24 5.58 -18.61 -0.10 -0.34 16 22 C -0.06 -0.15 3.06 71.23 0.22 0.07 16 23 O -0.56 -3.72 12.88 -148.98 -1.92 -5.64 16 24 Si 0.79 -2.52 30.82 68.60 2.11 -0.40 16 25 C -0.13 -0.61 6.34 -20.21 -0.13 -0.74 16 26 C -0.02 -0.20 9.64 22.74 0.22 0.02 16 27 C -0.11 0.03 6.79 31.11 0.21 0.24 16 28 H 0.10 -0.58 8.14 -2.39 -0.02 -0.60 16 29 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 30 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 31 H 0.07 0.16 8.13 -2.39 -0.02 0.14 16 32 H 0.07 0.15 8.13 -2.39 -0.02 0.13 16 33 H 0.09 -0.32 7.99 -2.39 -0.02 -0.34 16 34 H 0.12 -1.16 8.14 -2.39 -0.02 -1.18 16 35 H 0.39 -5.09 7.62 -74.05 -0.56 -5.65 16 36 H 0.07 0.26 8.14 -2.39 -0.02 0.24 16 37 H 0.07 0.22 8.05 -2.39 -0.02 0.20 16 38 H 0.41 -4.27 5.33 -92.71 -0.49 -4.77 16 39 H 0.17 -2.19 6.36 -2.91 -0.02 -2.21 16 40 H 0.16 -2.06 8.06 -2.91 -0.02 -2.08 16 41 H 0.44 -6.26 8.96 -92.71 -0.83 -7.09 16 42 H 0.21 -2.63 6.27 -2.91 -0.02 -2.65 16 43 H 0.10 0.43 7.96 -2.39 -0.02 0.42 16 44 H 0.38 -0.20 8.70 -74.06 -0.64 -0.84 16 45 H -0.26 0.86 7.00 99.48 0.70 1.55 16 46 H -0.31 -1.94 7.11 99.48 0.71 -1.23 16 47 H 0.11 1.49 7.64 -2.91 -0.02 1.47 16 48 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 49 H 0.10 0.25 7.39 -2.39 -0.02 0.24 16 Total: 0.00 -34.31 412.42 -2.22 -36.53 By element: Atomic # 1 Polarization: -24.03 SS G_CDS: -1.46 Total: -25.49 kcal Atomic # 6 Polarization: 5.87 SS G_CDS: 4.89 Total: 10.76 kcal Atomic # 7 Polarization: 5.44 SS G_CDS: -3.60 Total: 1.84 kcal Atomic # 8 Polarization: -19.07 SS G_CDS: -4.16 Total: -23.23 kcal Atomic # 14 Polarization: -2.52 SS G_CDS: 2.11 Total: -0.40 kcal Total: -34.31 -2.22 -36.53 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_13287722.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.997 kcal (2) G-P(sol) polarization free energy of solvation -34.311 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.308 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.224 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.535 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.532 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds