Wall clock time and date at job start Sun Mar 7 2021 07:03:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45199 * 109.47075 * 2 1 4 4 C 1.34230 * 116.99614 * 179.97438 * 3 2 1 5 5 O 1.20824 * 120.00179 * 0.02562 * 4 3 2 6 6 C 1.50706 * 119.99717 * 179.97438 * 4 3 2 7 7 H 1.08999 * 112.85047 * 311.20094 * 6 4 3 8 8 C 1.53784 * 113.61115 * 82.50661 * 6 4 3 9 9 C 1.53782 * 87.08188 * 139.98102 * 8 6 4 10 10 O 1.42895 * 113.69388 * 89.12446 * 9 8 6 11 11 C 1.53000 * 113.61464 * 220.01870 * 9 8 6 12 12 N 1.46491 * 109.47045 * 282.49635 * 11 9 8 13 13 C 1.34786 * 120.00070 * 180.02562 * 12 11 9 14 14 O 1.21517 * 119.99545 * 359.97438 * 13 12 11 15 15 C 1.48171 * 119.99858 * 179.97438 * 13 12 11 16 16 N 1.32712 * 119.72483 * 359.72411 * 15 13 12 17 17 C 1.31524 * 121.63940 * 179.75299 * 16 15 13 18 18 C 1.38552 * 120.90513 * 0.52542 * 17 16 15 19 19 C 1.50699 * 120.32648 * 179.72299 * 18 17 16 20 20 O 1.42897 * 109.47196 * 120.02163 * 19 18 17 21 21 Si 1.86303 * 109.46988 * 0.02562 * 19 18 17 22 22 C 1.38628 * 119.35412 * 359.74482 * 18 17 16 23 23 C 1.38591 * 118.48464 * 359.97438 * 22 18 17 24 24 C 1.53781 * 113.61278 * 179.97438 * 6 4 3 25 25 H 1.08998 * 109.47533 * 59.99688 * 1 2 3 26 26 H 1.08996 * 109.47853 * 180.02562 * 1 2 3 27 27 H 1.09002 * 109.47153 * 300.00058 * 1 2 3 28 28 H 1.09002 * 109.47153 * 239.99942 * 2 1 3 29 29 H 1.09001 * 109.46832 * 120.00132 * 2 1 3 30 30 H 1.09000 * 113.61297 * 254.52804 * 8 6 4 31 31 H 1.09003 * 113.61710 * 25.43289 * 8 6 4 32 32 H 0.96703 * 113.99699 * 82.46335 * 10 9 8 33 33 H 1.09004 * 109.47139 * 42.49651 * 11 9 8 34 34 H 1.09008 * 109.46876 * 162.49367 * 11 9 8 35 35 H 0.96998 * 120.00581 * 359.97438 * 12 11 9 36 36 H 1.08008 * 119.54571 * 180.27124 * 17 16 15 37 37 H 1.09005 * 109.47225 * 240.02384 * 19 18 17 38 38 H 0.96692 * 114.00282 * 299.99661 * 20 19 18 39 39 H 1.48495 * 109.99804 * 58.68308 * 21 19 18 40 40 H 1.48494 * 110.00013 * 180.02562 * 21 19 18 41 41 H 1.08001 * 120.76078 * 179.97438 * 22 18 17 42 42 H 1.07998 * 120.46998 * 180.02562 * 23 22 18 43 43 H 1.08999 * 113.61835 * 334.57399 * 24 6 4 44 44 H 1.09005 * 113.61003 * 105.47345 * 24 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5447 0.0005 5 8 4.0807 0.5865 0.0005 6 6 3.9207 2.9374 0.0000 7 1 3.4715 3.5810 -0.7564 8 6 3.9857 3.5776 1.3967 9 6 5.3561 4.1430 0.9876 10 8 5.2835 5.4203 0.3513 11 6 6.3977 4.0953 2.1072 12 7 6.1448 5.1823 3.0562 13 6 6.9429 5.3379 4.1311 14 8 7.8720 4.5761 4.3133 15 6 6.6874 6.4377 5.0906 16 7 5.6744 7.2697 4.8832 17 6 5.4105 8.2556 5.7128 18 6 6.1930 8.4693 6.8361 19 6 5.8826 9.6067 7.7746 20 8 5.6095 9.0880 9.0778 21 14 4.3932 10.5367 7.1518 22 6 7.2647 7.6267 7.0880 23 6 7.5156 6.5928 6.1999 24 6 5.4582 2.9680 0.0013 25 1 -0.3634 0.5139 -0.8899 26 1 -0.3635 -1.0276 0.0005 27 1 -0.3633 0.5138 0.8900 28 1 1.8933 -0.5138 -0.8900 29 1 1.8933 -0.5139 0.8900 30 1 3.2286 4.3443 1.5612 31 1 4.0375 2.8515 2.2080 32 1 5.2191 6.1633 0.9669 33 1 6.3313 3.1383 2.6249 34 1 7.3946 4.2094 1.6812 35 1 5.4034 5.7905 2.9106 36 1 4.5748 8.9101 5.5135 37 1 6.7376 10.2810 7.8236 38 1 4.8591 8.4791 9.1095 39 1 3.2286 9.6210 7.0502 40 1 4.0770 11.6615 8.0683 41 1 7.8898 7.7727 7.9565 42 1 8.3418 5.9172 6.3653 43 1 5.9124 2.0752 0.4312 44 1 5.8903 3.2424 -0.9611 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_13287726.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:03:56 Heat of formation + Delta-G solvation = -130.364850 kcal Electronic energy + Delta-G solvation = -28505.405039 eV Core-core repulsion = 24197.860937 eV Total energy + Delta-G solvation = -4307.544102 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.145 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.17706 -41.84279 -40.72063 -39.87183 -38.13622 -37.62600 -36.02869 -35.49143 -33.90534 -33.08104 -32.70510 -29.98266 -27.87232 -27.07442 -26.17184 -25.11372 -24.04473 -23.56106 -21.98584 -21.85412 -20.82768 -19.84396 -18.82335 -18.70294 -18.00947 -17.67299 -17.57475 -17.36306 -16.91362 -16.79044 -16.52021 -16.43968 -16.22723 -16.01150 -15.39567 -15.16529 -14.82877 -14.79633 -14.47362 -14.43324 -14.24350 -14.12197 -13.89728 -13.60641 -13.56784 -13.26348 -12.97118 -12.79508 -12.77594 -12.60805 -12.34327 -12.20590 -11.79355 -11.51644 -11.46829 -11.36079 -11.19296 -10.99272 -10.84463 -10.73135 -10.45068 -10.21802 -5.15319 -0.65939 -0.02500 1.03455 1.17707 1.40597 1.53888 1.62809 1.79751 1.83371 2.60335 2.71364 2.81880 3.05035 3.10409 3.29321 3.34590 3.36820 3.40123 3.57332 3.65920 3.84221 3.86928 3.94532 4.00177 4.04421 4.10477 4.26804 4.28685 4.28743 4.45887 4.47835 4.50985 4.60889 4.70429 4.73890 4.78828 4.79395 4.83779 4.88364 5.00878 5.02291 5.15026 5.27832 5.47623 6.13168 6.16105 6.34154 6.49765 6.76424 6.99383 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.471 3.529 5 O -0.505 6.505 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.145 4.145 9 C 0.098 3.902 10 O -0.530 6.530 11 C 0.101 3.899 12 N -0.713 5.713 13 C 0.575 3.425 14 O -0.523 6.523 15 C 0.080 3.920 16 N -0.454 5.454 17 C 0.104 3.896 18 C -0.147 4.147 19 C -0.074 4.074 20 O -0.526 6.526 21 Si 0.686 3.314 22 C -0.052 4.052 23 C -0.107 4.107 24 C -0.100 4.100 25 H 0.068 0.932 26 H 0.081 0.919 27 H 0.067 0.933 28 H 0.071 0.929 29 H 0.070 0.930 30 H 0.092 0.908 31 H 0.098 0.902 32 H 0.381 0.619 33 H 0.086 0.914 34 H 0.086 0.914 35 H 0.409 0.591 36 H 0.165 0.835 37 H 0.126 0.874 38 H 0.378 0.622 39 H -0.255 1.255 40 H -0.251 1.251 41 H 0.148 0.852 42 H 0.153 0.847 43 H 0.114 0.886 44 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.495 3.916 -0.115 5.250 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.392 6.392 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.183 4.183 9 C 0.057 3.943 10 O -0.336 6.336 11 C -0.022 4.022 12 N -0.366 5.366 13 C 0.360 3.640 14 O -0.398 6.398 15 C -0.058 4.058 16 N -0.165 5.165 17 C -0.055 4.055 18 C -0.150 4.150 19 C -0.185 4.185 20 O -0.332 6.332 21 Si 0.586 3.414 22 C -0.078 4.078 23 C -0.128 4.128 24 C -0.138 4.138 25 H 0.087 0.913 26 H 0.100 0.900 27 H 0.086 0.914 28 H 0.089 0.911 29 H 0.089 0.911 30 H 0.110 0.890 31 H 0.116 0.884 32 H 0.230 0.770 33 H 0.105 0.895 34 H 0.104 0.896 35 H 0.245 0.755 36 H 0.182 0.818 37 H 0.144 0.856 38 H 0.226 0.774 39 H -0.179 1.179 40 H -0.176 1.176 41 H 0.166 0.834 42 H 0.171 0.829 43 H 0.133 0.867 44 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -3.413 3.126 -0.979 4.730 hybrid contribution -0.152 -0.334 1.931 1.966 sum -3.565 2.792 0.952 4.627 Atomic orbital electron populations 1.21820 0.92336 1.03257 1.03657 1.23089 0.95618 0.79889 1.02756 1.86520 1.24383 1.32714 1.83668 1.23538 0.80689 0.92316 0.72126 1.90685 1.60515 1.42923 1.45116 1.22421 0.97270 0.90994 1.01431 0.84974 1.23666 0.98367 1.01003 0.95282 1.22334 0.93617 0.85622 0.92764 1.86579 1.96236 1.14374 1.36457 1.22028 0.99838 0.91246 0.89131 1.45685 1.33159 1.33026 1.24772 1.17823 0.82049 0.83411 0.80740 1.90845 1.30011 1.44314 1.74609 1.21108 0.93636 0.95645 0.95438 1.67499 1.16192 1.03275 1.29530 1.22620 0.98295 0.94483 0.90151 1.21605 0.96832 0.98842 0.97696 1.25032 1.11499 0.97187 0.84746 1.86637 1.54089 1.65535 1.26931 0.95044 0.76291 0.81220 0.88888 1.21574 0.95465 0.92321 0.98465 1.22232 0.99651 0.97837 0.93041 1.23050 0.93239 0.96596 1.00893 0.91334 0.90010 0.91401 0.91052 0.91130 0.88962 0.88398 0.77044 0.89540 0.89594 0.75486 0.81804 0.85621 0.77412 1.17921 1.17568 0.83382 0.82931 0.86728 0.88677 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.23 10.29 37.16 0.38 0.61 16 2 C 0.06 0.03 6.19 37.16 0.23 0.26 16 3 O -0.36 -0.64 10.22 -39.26 -0.40 -1.05 16 4 C 0.47 0.96 7.48 36.01 0.27 1.23 16 5 O -0.50 -2.40 15.65 -18.75 -0.29 -2.69 16 6 C -0.10 0.07 4.20 -90.95 -0.38 -0.32 16 7 H 0.13 -0.19 8.14 -51.93 -0.42 -0.61 16 8 C -0.15 0.29 7.02 -25.92 -0.18 0.11 16 9 C 0.10 -0.18 1.41 -89.83 -0.13 -0.31 16 10 O -0.53 0.83 13.42 -35.23 -0.47 0.36 16 11 C 0.10 -0.09 5.26 -4.05 -0.02 -0.12 16 12 N -0.71 0.67 5.31 -61.14 -0.32 0.35 16 13 C 0.58 1.04 7.81 -12.18 -0.10 0.94 16 14 O -0.52 -2.64 16.32 5.35 0.09 -2.55 16 15 C 0.08 0.06 6.75 -83.01 -0.56 -0.50 16 16 N -0.45 0.21 9.54 -9.80 -0.09 0.11 16 17 C 0.10 -0.19 9.84 -17.57 -0.17 -0.37 16 18 C -0.15 0.29 5.40 -104.36 -0.56 -0.27 16 19 C -0.07 0.20 2.83 36.00 0.10 0.30 16 20 O -0.53 0.51 12.78 -35.23 -0.45 0.06 16 21 Si 0.69 -2.22 29.82 -169.99 -5.07 -7.29 16 22 C -0.05 0.07 9.76 -39.31 -0.38 -0.32 16 23 C -0.11 0.00 9.63 -39.05 -0.38 -0.38 16 24 C -0.10 0.08 6.79 -25.94 -0.18 -0.10 16 25 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 26 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 27 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.07 0.04 8.13 -51.93 -0.42 -0.39 16 29 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 30 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 31 H 0.10 -0.17 7.99 -51.93 -0.41 -0.58 16 32 H 0.38 -1.67 7.60 45.56 0.35 -1.33 16 33 H 0.09 -0.03 8.05 -51.93 -0.42 -0.45 16 34 H 0.09 0.00 8.14 -51.92 -0.42 -0.42 16 35 H 0.41 -1.17 6.66 -40.82 -0.27 -1.44 16 36 H 0.17 -0.69 4.89 -52.48 -0.26 -0.95 16 37 H 0.13 -0.43 7.96 -51.93 -0.41 -0.85 16 38 H 0.38 -1.39 8.70 45.56 0.40 -0.99 16 39 H -0.25 0.37 7.11 56.52 0.40 0.77 16 40 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 41 H 0.15 -0.37 8.06 -52.49 -0.42 -0.80 16 42 H 0.15 -0.02 7.64 -52.49 -0.40 -0.42 16 43 H 0.11 -0.03 7.39 -51.93 -0.38 -0.41 16 44 H 0.09 -0.07 8.14 -51.93 -0.42 -0.50 16 LS Contribution 376.14 15.07 5.67 5.67 Total: 0.00 -9.46 376.14 -8.65 -18.11 By element: Atomic # 1 Polarization: -6.61 SS G_CDS: -5.24 Total: -11.85 kcal Atomic # 6 Polarization: 2.83 SS G_CDS: -2.06 Total: 0.77 kcal Atomic # 7 Polarization: 0.88 SS G_CDS: -0.42 Total: 0.46 kcal Atomic # 8 Polarization: -4.34 SS G_CDS: -1.53 Total: -5.87 kcal Atomic # 14 Polarization: -2.22 SS G_CDS: -5.07 Total: -7.29 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -9.46 -8.65 -18.11 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_13287726.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.257 kcal (2) G-P(sol) polarization free energy of solvation -9.462 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.719 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.646 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.108 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.365 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds