Wall clock time and date at job start Sun Mar 7 2021 07:03:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45199 * 109.47075 * 2 1 4 4 C 1.34230 * 116.99614 * 179.97438 * 3 2 1 5 5 O 1.20824 * 120.00179 * 0.02562 * 4 3 2 6 6 C 1.50706 * 119.99717 * 179.97438 * 4 3 2 7 7 H 1.08999 * 112.85047 * 311.20094 * 6 4 3 8 8 C 1.53784 * 113.61115 * 82.50661 * 6 4 3 9 9 C 1.53782 * 87.08188 * 139.98102 * 8 6 4 10 10 O 1.42895 * 113.69388 * 89.12446 * 9 8 6 11 11 C 1.53000 * 113.61464 * 220.01870 * 9 8 6 12 12 N 1.46491 * 109.47045 * 282.49635 * 11 9 8 13 13 C 1.34786 * 120.00070 * 180.02562 * 12 11 9 14 14 O 1.21517 * 119.99545 * 359.97438 * 13 12 11 15 15 C 1.48171 * 119.99858 * 179.97438 * 13 12 11 16 16 N 1.32712 * 119.72483 * 359.72411 * 15 13 12 17 17 C 1.31524 * 121.63940 * 179.75299 * 16 15 13 18 18 C 1.38552 * 120.90513 * 0.52542 * 17 16 15 19 19 C 1.50699 * 120.32648 * 179.72299 * 18 17 16 20 20 O 1.42897 * 109.47196 * 120.02163 * 19 18 17 21 21 Si 1.86303 * 109.46988 * 0.02562 * 19 18 17 22 22 C 1.38628 * 119.35412 * 359.74482 * 18 17 16 23 23 C 1.38591 * 118.48464 * 359.97438 * 22 18 17 24 24 C 1.53781 * 113.61278 * 179.97438 * 6 4 3 25 25 H 1.08998 * 109.47533 * 59.99688 * 1 2 3 26 26 H 1.08996 * 109.47853 * 180.02562 * 1 2 3 27 27 H 1.09002 * 109.47153 * 300.00058 * 1 2 3 28 28 H 1.09002 * 109.47153 * 239.99942 * 2 1 3 29 29 H 1.09001 * 109.46832 * 120.00132 * 2 1 3 30 30 H 1.09000 * 113.61297 * 254.52804 * 8 6 4 31 31 H 1.09003 * 113.61710 * 25.43289 * 8 6 4 32 32 H 0.96703 * 113.99699 * 82.46335 * 10 9 8 33 33 H 1.09004 * 109.47139 * 42.49651 * 11 9 8 34 34 H 1.09008 * 109.46876 * 162.49367 * 11 9 8 35 35 H 0.96998 * 120.00581 * 359.97438 * 12 11 9 36 36 H 1.08008 * 119.54571 * 180.27124 * 17 16 15 37 37 H 1.09005 * 109.47225 * 240.02384 * 19 18 17 38 38 H 0.96692 * 114.00282 * 299.99661 * 20 19 18 39 39 H 1.48495 * 109.99804 * 58.68308 * 21 19 18 40 40 H 1.48494 * 110.00013 * 180.02562 * 21 19 18 41 41 H 1.08001 * 120.76078 * 179.97438 * 22 18 17 42 42 H 1.07998 * 120.46998 * 180.02562 * 23 22 18 43 43 H 1.08999 * 113.61835 * 334.57399 * 24 6 4 44 44 H 1.09005 * 113.61003 * 105.47345 * 24 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5447 0.0005 5 8 4.0807 0.5865 0.0005 6 6 3.9207 2.9374 0.0000 7 1 3.4715 3.5810 -0.7564 8 6 3.9857 3.5776 1.3967 9 6 5.3561 4.1430 0.9876 10 8 5.2835 5.4203 0.3513 11 6 6.3977 4.0953 2.1072 12 7 6.1448 5.1823 3.0562 13 6 6.9429 5.3379 4.1311 14 8 7.8720 4.5761 4.3133 15 6 6.6874 6.4377 5.0906 16 7 5.6744 7.2697 4.8832 17 6 5.4105 8.2556 5.7128 18 6 6.1930 8.4693 6.8361 19 6 5.8826 9.6067 7.7746 20 8 5.6095 9.0880 9.0778 21 14 4.3932 10.5367 7.1518 22 6 7.2647 7.6267 7.0880 23 6 7.5156 6.5928 6.1999 24 6 5.4582 2.9680 0.0013 25 1 -0.3634 0.5139 -0.8899 26 1 -0.3635 -1.0276 0.0005 27 1 -0.3633 0.5138 0.8900 28 1 1.8933 -0.5138 -0.8900 29 1 1.8933 -0.5139 0.8900 30 1 3.2286 4.3443 1.5612 31 1 4.0375 2.8515 2.2080 32 1 5.2191 6.1633 0.9669 33 1 6.3313 3.1383 2.6249 34 1 7.3946 4.2094 1.6812 35 1 5.4034 5.7905 2.9106 36 1 4.5748 8.9101 5.5135 37 1 6.7376 10.2810 7.8236 38 1 4.8591 8.4791 9.1095 39 1 3.2286 9.6210 7.0502 40 1 4.0770 11.6615 8.0683 41 1 7.8898 7.7727 7.9565 42 1 8.3418 5.9172 6.3653 43 1 5.9124 2.0752 0.4312 44 1 5.8903 3.2424 -0.9611 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_13287726.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:03:56 Heat of formation + Delta-G solvation = -133.808443 kcal Electronic energy + Delta-G solvation = -28505.554365 eV Core-core repulsion = 24197.860937 eV Total energy + Delta-G solvation = -4307.693428 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.145 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.20190 -41.83450 -40.75042 -39.92078 -38.01495 -37.77403 -36.03331 -35.48076 -33.81122 -33.01163 -32.68504 -29.96304 -27.79695 -26.97921 -26.16249 -25.01020 -23.99388 -23.51448 -22.01069 -21.89231 -20.77502 -19.82808 -18.81520 -18.70081 -17.97842 -17.76132 -17.52095 -17.37312 -16.88805 -16.78625 -16.43620 -16.31782 -16.16735 -15.95650 -15.38411 -15.16257 -14.83559 -14.79273 -14.39784 -14.33264 -14.22349 -14.11609 -13.79946 -13.52184 -13.48350 -13.26694 -12.98692 -12.78639 -12.63426 -12.57722 -12.28713 -12.13826 -11.80230 -11.59434 -11.56865 -11.37979 -11.09316 -10.93320 -10.69831 -10.67848 -10.45619 -10.17547 -4.90945 -0.61367 0.07868 1.03492 1.25453 1.50544 1.58857 1.61579 1.82836 1.99603 2.64571 2.85128 2.89064 3.11471 3.33304 3.36873 3.43606 3.46221 3.50202 3.68402 3.78956 3.89068 3.93002 3.94524 4.01994 4.12061 4.19711 4.29476 4.30365 4.48959 4.57278 4.59030 4.61608 4.68053 4.78882 4.84857 4.87037 4.89096 4.90577 4.99097 5.09575 5.11951 5.14879 5.38147 5.40449 6.16104 6.42977 6.54512 6.62387 6.62993 6.95984 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.360 6.360 4 C 0.470 3.530 5 O -0.538 6.538 6 C -0.100 4.100 7 H 0.145 0.855 8 C -0.137 4.137 9 C 0.114 3.886 10 O -0.538 6.538 11 C 0.104 3.896 12 N -0.697 5.697 13 C 0.571 3.429 14 O -0.565 6.565 15 C 0.064 3.936 16 N -0.455 5.455 17 C 0.103 3.897 18 C -0.139 4.139 19 C -0.080 4.080 20 O -0.545 6.545 21 Si 0.769 3.231 22 C -0.053 4.053 23 C -0.116 4.116 24 C -0.106 4.106 25 H 0.069 0.931 26 H 0.096 0.904 27 H 0.069 0.931 28 H 0.067 0.933 29 H 0.067 0.933 30 H 0.110 0.890 31 H 0.094 0.906 32 H 0.394 0.606 33 H 0.080 0.920 34 H 0.076 0.924 35 H 0.420 0.580 36 H 0.189 0.811 37 H 0.137 0.863 38 H 0.388 0.612 39 H -0.273 1.273 40 H -0.302 1.302 41 H 0.159 0.841 42 H 0.147 0.853 43 H 0.105 0.895 44 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.643 5.249 -0.165 7.010 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.314 3.686 5 O -0.428 6.428 6 C -0.119 4.119 7 H 0.163 0.837 8 C -0.175 4.175 9 C 0.072 3.928 10 O -0.346 6.346 11 C -0.020 4.020 12 N -0.350 5.350 13 C 0.357 3.643 14 O -0.443 6.443 15 C -0.073 4.073 16 N -0.166 5.166 17 C -0.057 4.057 18 C -0.141 4.141 19 C -0.189 4.189 20 O -0.353 6.353 21 Si 0.673 3.327 22 C -0.079 4.079 23 C -0.137 4.137 24 C -0.144 4.144 25 H 0.088 0.912 26 H 0.114 0.886 27 H 0.088 0.912 28 H 0.086 0.914 29 H 0.086 0.914 30 H 0.128 0.872 31 H 0.113 0.887 32 H 0.245 0.755 33 H 0.098 0.902 34 H 0.094 0.906 35 H 0.258 0.742 36 H 0.206 0.794 37 H 0.154 0.846 38 H 0.238 0.762 39 H -0.199 1.199 40 H -0.230 1.230 41 H 0.177 0.823 42 H 0.165 0.835 43 H 0.124 0.876 44 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -4.586 4.467 -1.054 6.488 hybrid contribution 0.161 -0.696 1.996 2.120 sum -4.426 3.771 0.942 5.890 Atomic orbital electron populations 1.21823 0.90655 1.04261 1.03772 1.23260 0.96974 0.79401 1.02457 1.86530 1.24283 1.33438 1.83384 1.24075 0.80539 0.92967 0.70972 1.90668 1.61150 1.44204 1.46807 1.22531 0.97014 0.89654 1.02707 0.83709 1.23651 0.98501 1.01081 0.94270 1.22080 0.93363 0.85504 0.91841 1.86560 1.96189 1.14688 1.37163 1.21981 0.99776 0.90966 0.89272 1.45578 1.32782 1.32813 1.23852 1.18074 0.81691 0.83309 0.81227 1.90817 1.31834 1.45933 1.75696 1.20992 0.94629 0.96020 0.95657 1.67496 1.15743 1.03453 1.29915 1.23032 0.98684 0.94199 0.89769 1.21693 0.96258 0.98589 0.97595 1.25246 1.12583 0.96989 0.84098 1.86614 1.54891 1.66009 1.27777 0.94116 0.74218 0.77365 0.87007 1.21720 0.95824 0.91918 0.98455 1.22273 0.99689 0.98370 0.93408 1.23061 0.93304 0.96814 1.01172 0.91213 0.88584 0.91208 0.91446 0.91432 0.87170 0.88744 0.75541 0.90185 0.90554 0.74166 0.79429 0.84586 0.76221 1.19935 1.23037 0.82330 0.83531 0.87647 0.88665 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.48 10.29 71.98 0.74 1.22 16 2 C 0.05 0.08 6.19 71.98 0.45 0.53 16 3 O -0.36 -1.44 10.22 -51.42 -0.53 -1.96 16 4 C 0.47 2.27 7.48 71.24 0.53 2.80 16 5 O -0.54 -5.93 15.65 21.97 0.34 -5.59 16 6 C -0.10 0.13 4.20 -11.01 -0.05 0.08 16 7 H 0.15 -0.54 8.14 -2.39 -0.02 -0.56 16 8 C -0.14 0.63 7.02 31.12 0.22 0.84 16 9 C 0.11 -0.43 1.41 -10.28 -0.01 -0.44 16 10 O -0.54 2.22 13.42 -148.98 -2.00 0.22 16 11 C 0.10 -0.12 5.26 86.38 0.45 0.34 16 12 N -0.70 1.13 5.31 -465.65 -2.47 -1.35 16 13 C 0.57 2.63 7.81 86.88 0.68 3.31 16 14 O -0.56 -6.78 16.32 -3.77 -0.06 -6.84 16 15 C 0.06 0.12 6.75 41.91 0.28 0.40 16 16 N -0.45 0.76 9.54 -184.91 -1.76 -1.01 16 17 C 0.10 -0.53 9.84 84.81 0.83 0.30 16 18 C -0.14 0.70 5.40 -19.70 -0.11 0.59 16 19 C -0.08 0.52 2.83 71.24 0.20 0.72 16 20 O -0.54 1.50 12.78 -148.98 -1.90 -0.41 16 21 Si 0.77 -5.82 29.82 68.60 2.05 -3.78 16 22 C -0.05 0.16 9.76 22.45 0.22 0.38 16 23 C -0.12 -0.09 9.63 22.61 0.22 0.13 16 24 C -0.11 0.10 6.79 31.11 0.21 0.31 16 25 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 26 H 0.10 -0.59 8.14 -2.39 -0.02 -0.61 16 27 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 28 H 0.07 0.14 8.13 -2.39 -0.02 0.12 16 29 H 0.07 0.13 8.13 -2.39 -0.02 0.11 16 30 H 0.11 -0.86 8.14 -2.39 -0.02 -0.88 16 31 H 0.09 -0.32 7.99 -2.39 -0.02 -0.34 16 32 H 0.39 -4.00 7.60 -74.06 -0.56 -4.56 16 33 H 0.08 0.05 8.05 -2.38 -0.02 0.03 16 34 H 0.08 0.10 8.14 -2.38 -0.02 0.08 16 35 H 0.42 -2.68 6.66 -92.71 -0.62 -3.29 16 36 H 0.19 -2.00 4.89 -2.91 -0.01 -2.02 16 37 H 0.14 -1.14 7.96 -2.38 -0.02 -1.16 16 38 H 0.39 -3.16 8.70 -74.06 -0.64 -3.80 16 39 H -0.27 1.19 7.11 99.48 0.71 1.90 16 40 H -0.30 -0.37 7.11 99.48 0.71 0.33 16 41 H 0.16 -0.86 8.06 -2.91 -0.02 -0.89 16 42 H 0.15 0.21 7.64 -2.91 -0.02 0.19 16 43 H 0.11 0.11 7.39 -2.39 -0.02 0.10 16 44 H 0.09 -0.09 8.14 -2.38 -0.02 -0.11 16 Total: 0.00 -22.87 376.14 -2.19 -25.06 By element: Atomic # 1 Polarization: -15.16 SS G_CDS: -0.72 Total: -15.88 kcal Atomic # 6 Polarization: 6.65 SS G_CDS: 4.87 Total: 11.52 kcal Atomic # 7 Polarization: 1.88 SS G_CDS: -4.24 Total: -2.35 kcal Atomic # 8 Polarization: -10.43 SS G_CDS: -4.15 Total: -14.58 kcal Atomic # 14 Polarization: -5.82 SS G_CDS: 2.05 Total: -3.78 kcal Total: -22.87 -2.19 -25.06 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_13287726.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.749 kcal (2) G-P(sol) polarization free energy of solvation -22.874 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.623 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.185 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.060 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.808 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds