Wall clock time and date at job start Sun Mar 7 2021 07:04:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45202 * 109.47019 * 2 1 4 4 C 1.34230 * 116.99628 * 179.97438 * 3 2 1 5 5 O 1.20821 * 120.00225 * 0.02562 * 4 3 2 6 6 C 1.50701 * 119.99426 * 179.97438 * 4 3 2 7 7 H 1.08994 * 112.85038 * 48.81341 * 6 4 3 8 8 C 1.53784 * 113.60858 * 180.02562 * 6 4 3 9 9 C 1.53790 * 87.07837 * 139.98322 * 8 6 4 10 10 O 1.42898 * 113.61183 * 89.20043 * 9 8 6 11 11 C 1.53001 * 113.61259 * 220.01578 * 9 8 6 12 12 N 1.46505 * 109.46894 * 178.47230 * 11 9 8 13 13 C 1.34767 * 119.99691 * 180.02562 * 12 11 9 14 14 O 1.21628 * 120.00367 * 359.97438 * 13 12 11 15 15 C 1.47267 * 119.99842 * 179.97438 * 13 12 11 16 16 C 1.36773 * 126.94141 * 359.97438 * 15 13 12 17 17 N 1.34657 * 108.39660 * 180.29481 * 16 15 13 18 18 C 1.46497 * 124.84913 * 179.73307 * 17 16 15 19 19 C 1.36447 * 110.29676 * 359.55949 * 17 16 15 20 20 C 1.50700 * 125.57173 * 180.20478 * 19 17 16 21 21 O 1.42904 * 109.47174 * 30.29715 * 20 19 17 22 22 Si 1.86295 * 109.47310 * 150.30383 * 20 19 17 23 23 C 1.34486 * 108.85992 * 0.44135 * 19 17 16 24 24 C 1.53776 * 87.17110 * 334.61082 * 9 8 6 25 25 H 1.08994 * 109.47449 * 180.02562 * 1 2 3 26 26 H 1.08999 * 109.47420 * 300.00469 * 1 2 3 27 27 H 1.08999 * 109.47011 * 60.00334 * 1 2 3 28 28 H 1.08999 * 109.47420 * 239.99531 * 2 1 3 29 29 H 1.09002 * 109.46564 * 119.99430 * 2 1 3 30 30 H 1.08997 * 113.61962 * 25.44107 * 8 6 4 31 31 H 1.08997 * 113.61769 * 254.52851 * 8 6 4 32 32 H 0.96697 * 113.99732 * 181.52810 * 10 9 8 33 33 H 1.09002 * 109.46796 * 58.47452 * 11 9 8 34 34 H 1.09001 * 109.47267 * 298.47246 * 11 9 8 35 35 H 0.96998 * 119.99818 * 0.02562 * 12 11 9 36 36 H 1.08002 * 125.79812 * 0.02562 * 16 15 13 37 37 H 1.09000 * 109.46896 * 90.02935 * 18 17 16 38 38 H 1.09003 * 109.47333 * 210.02160 * 18 17 16 39 39 H 1.08994 * 109.47208 * 330.02345 * 18 17 16 40 40 H 1.09003 * 109.46924 * 270.30321 * 20 19 17 41 41 H 0.96699 * 113.99786 * 179.97438 * 21 20 19 42 42 H 1.48507 * 109.99943 * 178.68046 * 22 20 19 43 43 H 1.48504 * 110.00025 * 299.99270 * 22 20 19 44 44 H 1.08000 * 126.83781 * 179.72126 * 23 19 17 45 45 H 1.08997 * 113.61468 * 139.94339 * 24 9 8 46 46 H 1.09000 * 113.61177 * 270.84081 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9207 2.9374 0.0000 7 1 3.4708 3.5818 0.7553 8 6 5.4582 2.9680 0.0001 9 6 5.3565 4.1421 -0.9880 10 8 5.2836 5.4201 -0.3529 11 6 6.3988 4.0934 -2.1070 12 7 6.1973 5.2280 -3.0117 13 6 7.0043 5.3905 -4.0787 14 8 7.9003 4.5956 -4.2903 15 6 6.8015 6.5307 -4.9885 16 6 5.8451 7.5032 -4.8870 17 7 5.9955 8.3563 -5.9180 18 6 5.1549 9.5310 -6.1619 19 6 7.0450 7.9723 -6.7008 20 6 7.5193 8.6836 -7.9419 21 8 7.2508 10.0820 -7.8214 22 14 9.3517 8.4184 -8.1477 23 6 7.5839 6.8525 -6.1869 24 6 3.9856 3.5789 -1.3980 25 1 -0.3634 -1.0276 0.0005 26 1 -0.3634 0.5139 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 1.8934 -0.5139 -0.8899 29 1 1.8932 -0.5138 0.8901 30 1 5.9128 2.0749 -0.4285 31 1 5.8894 3.2435 0.9625 32 1 5.1960 6.1607 -0.9683 33 1 6.2917 3.1619 -2.6629 34 1 7.3982 4.1460 -1.6752 35 1 5.4830 5.8621 -2.8427 36 1 5.0940 7.5724 -4.1141 37 1 5.5834 10.3959 -5.6555 38 1 5.1044 9.7256 -7.2332 39 1 4.1515 9.3457 -5.7786 40 1 6.9948 8.2866 -8.8110 41 1 7.5309 10.6036 -8.5860 42 1 9.8260 9.0884 -9.3853 43 1 10.0783 8.9556 -6.9692 44 1 8.4250 6.2998 -6.5786 45 1 3.2296 4.3466 -1.5627 46 1 4.0368 2.8529 -2.2095 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_13287730.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:00 Heat of formation + Delta-G solvation = -122.511713 kcal Electronic energy + Delta-G solvation = -29229.958051 eV Core-core repulsion = 24895.443008 eV Total energy + Delta-G solvation = -4334.515043 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.161 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.41879 -42.07836 -40.77196 -39.75357 -37.83869 -37.75074 -35.95003 -35.27617 -33.72347 -32.67588 -31.74628 -29.67043 -27.57276 -26.96784 -26.47810 -25.74574 -23.91480 -23.31898 -21.90479 -21.16191 -20.75957 -20.36170 -19.11164 -18.67296 -18.46713 -17.76591 -17.60422 -17.35866 -17.14093 -16.81972 -16.41965 -16.20840 -16.02639 -15.57777 -15.48558 -15.15932 -14.90732 -14.60501 -14.44856 -14.33062 -14.11984 -13.87251 -13.78151 -13.49007 -13.33280 -13.25378 -13.16117 -13.09663 -12.96640 -12.72436 -12.68241 -12.55957 -12.26420 -12.11684 -11.72119 -11.57199 -11.45730 -11.06185 -10.88026 -10.79511 -10.21744 -9.55791 -9.14731 -4.89718 0.74975 1.02428 1.05575 1.49805 1.57033 1.61711 1.87619 2.03858 2.19206 2.55446 2.88207 3.12857 3.14823 3.40248 3.47264 3.51647 3.70602 3.88751 3.92488 3.96208 3.99946 4.03835 4.23441 4.29854 4.31318 4.37721 4.39023 4.48275 4.51708 4.61112 4.68689 4.72522 4.80127 4.82047 4.88489 4.88897 4.93065 4.96525 4.99534 5.12067 5.15014 5.33361 5.42203 5.68142 6.01591 6.25490 6.51192 6.53439 6.64637 6.67861 7.30789 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.539 6.539 6 C -0.101 4.101 7 H 0.145 0.855 8 C -0.109 4.109 9 C 0.116 3.884 10 O -0.538 6.538 11 C 0.109 3.891 12 N -0.714 5.714 13 C 0.592 3.408 14 O -0.591 6.591 15 C -0.260 4.260 16 C 0.071 3.929 17 N -0.427 5.427 18 C 0.072 3.928 19 C 0.013 3.987 20 C -0.044 4.044 21 O -0.553 6.553 22 Si 0.761 3.239 23 C -0.161 4.161 24 C -0.134 4.134 25 H 0.095 0.905 26 H 0.068 0.932 27 H 0.070 0.930 28 H 0.067 0.933 29 H 0.066 0.934 30 H 0.103 0.897 31 H 0.092 0.908 32 H 0.393 0.607 33 H 0.074 0.926 34 H 0.065 0.935 35 H 0.412 0.588 36 H 0.214 0.786 37 H 0.075 0.925 38 H 0.092 0.908 39 H 0.107 0.893 40 H 0.103 0.897 41 H 0.400 0.600 42 H -0.272 1.272 43 H -0.312 1.312 44 H 0.154 0.846 45 H 0.114 0.886 46 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.147 5.389 -2.893 10.188 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.314 3.686 5 O -0.429 6.429 6 C -0.119 4.119 7 H 0.163 0.837 8 C -0.147 4.147 9 C 0.074 3.926 10 O -0.346 6.346 11 C -0.015 4.015 12 N -0.368 5.368 13 C 0.382 3.618 14 O -0.472 6.472 15 C -0.271 4.271 16 C -0.066 4.066 17 N -0.100 5.100 18 C -0.068 4.068 19 C -0.096 4.096 20 C -0.154 4.154 21 O -0.364 6.364 22 Si 0.666 3.334 23 C -0.185 4.185 24 C -0.172 4.172 25 H 0.114 0.886 26 H 0.088 0.912 27 H 0.089 0.911 28 H 0.086 0.914 29 H 0.085 0.915 30 H 0.121 0.879 31 H 0.111 0.889 32 H 0.244 0.756 33 H 0.092 0.908 34 H 0.083 0.917 35 H 0.249 0.751 36 H 0.230 0.770 37 H 0.093 0.907 38 H 0.111 0.889 39 H 0.126 0.874 40 H 0.121 0.879 41 H 0.252 0.748 42 H -0.198 1.198 43 H -0.240 1.240 44 H 0.172 0.828 45 H 0.133 0.867 46 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -6.953 4.657 -2.104 8.629 hybrid contribution -0.288 1.167 -0.602 1.344 sum -7.241 5.824 -2.706 9.678 Atomic orbital electron populations 1.21822 0.90609 1.04261 1.03785 1.23260 0.96997 0.79422 1.02434 1.86526 1.24254 1.33411 1.83402 1.24091 0.80536 0.92997 0.70967 1.90671 1.61180 1.44255 1.46804 1.22565 0.96819 0.89637 1.02920 0.83695 1.23070 0.93441 0.97014 1.01143 1.22076 0.93459 0.85319 0.91747 1.86577 1.96021 1.14824 1.37216 1.21809 0.99419 0.90132 0.90136 1.45457 1.35221 1.29519 1.26575 1.17610 0.80391 0.83747 0.80040 1.90772 1.34692 1.46945 1.74782 1.20223 1.04767 1.00550 1.01516 1.22463 1.00615 0.90171 0.93375 1.43725 1.24189 1.22138 1.19959 1.22329 0.94561 0.85171 1.04782 1.19889 0.93960 0.98336 0.97401 1.24338 1.12272 0.82779 0.95989 1.86483 1.84128 1.17480 1.48276 0.93535 0.72107 0.91203 0.76538 1.21749 1.02415 0.97811 0.96530 1.23679 0.98304 1.01127 0.94054 0.88608 0.91245 0.91119 0.91413 0.91545 0.87884 0.88921 0.75588 0.90783 0.91671 0.75074 0.76963 0.90668 0.88899 0.87438 0.87894 0.74821 1.19755 1.24035 0.82817 0.86734 0.88729 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.52 10.29 71.98 0.74 1.26 16 2 C 0.05 0.08 6.19 71.98 0.45 0.52 16 3 O -0.36 -1.35 10.22 -51.42 -0.53 -1.88 16 4 C 0.47 2.27 7.49 71.24 0.53 2.80 16 5 O -0.54 -6.12 15.65 21.98 0.34 -5.78 16 6 C -0.10 0.15 4.20 -10.95 -0.05 0.11 16 7 H 0.15 -0.60 8.14 -2.39 -0.02 -0.62 16 8 C -0.11 0.04 6.80 31.12 0.21 0.25 16 9 C 0.12 -0.45 1.46 -10.27 -0.01 -0.47 16 10 O -0.54 2.71 13.40 -148.98 -2.00 0.72 16 11 C 0.11 -0.01 5.30 86.38 0.46 0.45 16 12 N -0.71 1.52 5.33 -466.51 -2.49 -0.97 16 13 C 0.59 4.00 7.81 86.62 0.68 4.68 16 14 O -0.59 -9.87 16.97 -4.12 -0.07 -9.94 16 15 C -0.26 -0.98 6.29 -19.04 -0.12 -1.10 16 16 C 0.07 -0.26 10.83 83.92 0.91 0.65 16 17 N -0.43 0.72 3.09 -533.25 -1.65 -0.92 16 18 C 0.07 -0.52 9.80 127.77 1.25 0.73 16 19 C 0.01 0.02 6.17 40.98 0.25 0.28 16 20 C -0.04 0.11 2.85 71.24 0.20 0.32 16 21 O -0.55 1.88 10.32 -148.98 -1.54 0.34 16 22 Si 0.76 -0.59 31.12 68.60 2.13 1.55 16 23 C -0.16 -0.82 9.49 23.62 0.22 -0.60 16 24 C -0.13 0.73 7.03 31.18 0.22 0.95 16 25 H 0.10 -0.60 8.14 -2.39 -0.02 -0.62 16 26 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 27 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 28 H 0.07 0.12 8.13 -2.39 -0.02 0.11 16 29 H 0.07 0.14 8.13 -2.39 -0.02 0.12 16 30 H 0.10 0.22 7.39 -2.39 -0.02 0.21 16 31 H 0.09 -0.01 8.14 -2.39 -0.02 -0.03 16 32 H 0.39 -4.98 7.41 -74.06 -0.55 -5.53 16 33 H 0.07 0.17 7.98 -2.39 -0.02 0.15 16 34 H 0.06 0.25 8.14 -2.39 -0.02 0.23 16 35 H 0.41 -4.34 6.06 -92.71 -0.56 -4.90 16 36 H 0.21 -2.95 7.45 -2.91 -0.02 -2.97 16 37 H 0.07 -0.48 8.14 -2.39 -0.02 -0.50 16 38 H 0.09 -0.63 6.76 -2.39 -0.02 -0.64 16 39 H 0.11 -1.37 8.13 -2.39 -0.02 -1.39 16 40 H 0.10 -0.71 7.96 -2.39 -0.02 -0.73 16 41 H 0.40 -4.35 8.74 -74.06 -0.65 -5.00 16 42 H -0.27 -0.38 7.11 99.48 0.71 0.33 16 43 H -0.31 -2.92 7.11 99.48 0.71 -2.21 16 44 H 0.15 0.66 6.89 -2.91 -0.02 0.64 16 45 H 0.11 -1.13 8.14 -2.39 -0.02 -1.15 16 46 H 0.09 -0.37 7.94 -2.39 -0.02 -0.39 16 Total: 0.00 -30.99 386.43 -0.53 -31.52 By element: Atomic # 1 Polarization: -24.77 SS G_CDS: -0.69 Total: -25.46 kcal Atomic # 6 Polarization: 4.88 SS G_CDS: 5.95 Total: 10.82 kcal Atomic # 7 Polarization: 2.24 SS G_CDS: -4.13 Total: -1.89 kcal Atomic # 8 Polarization: -12.76 SS G_CDS: -3.79 Total: -16.54 kcal Atomic # 14 Polarization: -0.59 SS G_CDS: 2.13 Total: 1.55 kcal Total: -30.99 -0.53 -31.52 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_13287730.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.989 kcal (2) G-P(sol) polarization free energy of solvation -30.991 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.980 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.531 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.523 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.512 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds