Wall clock time and date at job start Sun Mar 7 2021 07:04:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.45199 * 109.47191 * 2 1 4 4 C 1.34224 * 117.00347 * 180.02562 * 3 2 1 5 5 O 1.20832 * 119.99791 * 359.97438 * 4 3 2 6 6 C 1.50698 * 120.00535 * 179.97438 * 4 3 2 7 7 H 1.09003 * 112.84636 * 311.19423 * 6 4 3 8 8 C 1.53781 * 113.61565 * 82.49826 * 6 4 3 9 9 C 1.54049 * 87.08031 * 139.97986 * 8 6 4 10 10 O 1.42907 * 113.61025 * 89.07067 * 9 8 6 11 11 C 1.52990 * 113.70090 * 220.05426 * 9 8 6 12 12 N 1.46506 * 109.47145 * 282.42454 * 11 9 8 13 13 C 1.34768 * 120.00155 * 179.97438 * 12 11 9 14 14 O 1.21592 * 120.00061 * 359.97438 * 13 12 11 15 15 C 1.47607 * 120.00291 * 180.02562 * 13 12 11 16 16 C 1.39711 * 120.09029 * 179.72906 * 15 13 12 17 17 C 1.37724 * 119.90786 * 179.71939 * 16 15 13 18 18 C 1.50702 * 119.95286 * 180.25092 * 17 16 15 19 19 O 1.42905 * 109.47112 * 105.30065 * 18 17 16 20 20 Si 1.86295 * 109.47325 * 345.29979 * 18 17 16 21 21 C 1.38973 * 120.08806 * 0.54593 * 17 16 15 22 22 O 1.35719 * 119.90954 * 179.70054 * 21 17 16 23 23 C 1.39007 * 120.17785 * 359.72811 * 21 17 16 24 24 C 1.50703 * 119.95693 * 179.97438 * 23 21 17 25 25 C 1.37678 * 120.09049 * 359.97438 * 23 21 17 26 26 C 1.53781 * 113.61793 * 179.97438 * 6 4 3 27 27 H 1.08996 * 109.47135 * 300.00510 * 1 2 3 28 28 H 1.09002 * 109.46765 * 60.00332 * 1 2 3 29 29 H 1.09004 * 109.47019 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47769 * 239.99816 * 2 1 3 31 31 H 1.09005 * 109.47076 * 119.99260 * 2 1 3 32 32 H 1.09005 * 113.61471 * 254.53569 * 8 6 4 33 33 H 1.08996 * 113.61178 * 25.34912 * 8 6 4 34 34 H 0.96698 * 113.99817 * 82.62157 * 10 9 8 35 35 H 1.09003 * 109.47414 * 42.42054 * 11 9 8 36 36 H 1.08995 * 109.48071 * 162.42157 * 11 9 8 37 37 H 0.97005 * 119.99558 * 359.97438 * 12 11 9 38 38 H 1.07999 * 120.04398 * 359.97438 * 16 15 13 39 39 H 1.08999 * 109.46898 * 225.29550 * 18 17 16 40 40 H 0.96697 * 113.99432 * 299.99451 * 19 18 17 41 41 H 1.48499 * 109.99993 * 180.02562 * 20 18 17 42 42 H 1.48507 * 109.99773 * 301.31909 * 20 18 17 43 43 H 0.96698 * 113.99864 * 270.02517 * 22 21 17 44 44 H 1.09000 * 109.47080 * 270.01564 * 24 23 21 45 45 H 1.09002 * 109.46907 * 30.01687 * 24 23 21 46 46 H 1.08996 * 109.47266 * 150.02138 * 24 23 21 47 47 H 1.08000 * 120.04897 * 180.02562 * 25 23 21 48 48 H 1.09002 * 113.61445 * 334.56799 * 26 6 4 49 49 H 1.09002 * 113.61408 * 105.38530 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3446 1.5449 -0.0005 5 8 4.0807 0.5866 -0.0005 6 6 3.9207 2.9374 -0.0012 7 1 3.4709 3.5812 -0.7571 8 6 3.9867 3.5774 1.3956 9 6 5.3592 4.1437 0.9849 10 8 5.2841 5.4207 0.3478 11 6 6.4034 4.0959 2.1020 12 7 6.1535 5.1837 3.0509 13 6 6.9536 5.3387 4.1243 14 8 7.8826 4.5754 4.3054 15 6 6.7014 6.4343 5.0808 16 6 7.5263 6.5933 6.1971 17 6 7.2911 7.6204 7.0840 18 6 8.1837 7.7961 8.2855 19 8 9.0535 8.9100 8.0739 20 14 9.1989 6.2543 8.5360 21 6 6.2282 8.4911 6.8758 22 8 5.9961 9.4983 7.7554 23 6 5.4018 8.3329 5.7693 24 6 4.2502 9.2796 5.5486 25 6 5.6338 7.3124 4.8747 26 6 5.4582 2.9681 -0.0011 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 1.8934 -0.5138 -0.8899 31 1 1.8933 -0.5137 0.8901 32 1 3.2296 4.3440 1.5609 33 1 4.0376 2.8510 2.2067 34 1 5.2216 6.1641 0.9631 35 1 6.3375 3.1393 2.6203 36 1 7.3993 4.2091 1.6737 37 1 5.4121 5.7924 2.9066 38 1 8.3496 5.9141 6.3622 39 1 7.5717 7.9759 9.1695 40 1 9.6288 8.8186 7.3021 41 1 10.0829 6.4147 9.7183 42 1 8.3055 5.0832 8.7255 43 1 5.4020 9.2588 8.4797 44 1 3.3598 8.8898 6.0418 45 1 4.4980 10.2562 5.9646 46 1 4.0600 9.3775 4.4799 47 1 4.9916 7.1903 4.0151 48 1 5.9127 2.0753 0.4282 49 1 5.8895 3.2413 -0.9641 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_13287732.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:05 Heat of formation + Delta-G solvation = -187.597499 kcal Electronic energy + Delta-G solvation = -33071.344950 eV Core-core repulsion = 28352.525154 eV Total energy + Delta-G solvation = -4718.819796 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -42.19598 -41.72708 -40.78876 -39.99351 -37.87634 -37.67741 -37.55062 -36.09754 -35.55203 -34.09618 -32.75121 -32.15919 -29.64119 -28.17215 -27.18598 -26.98069 -26.40696 -24.56261 -23.72483 -22.21403 -21.91639 -21.63415 -20.89386 -19.67202 -19.42147 -18.69175 -18.14688 -17.84743 -17.70731 -17.43247 -17.13846 -16.97902 -16.59095 -16.49976 -16.15886 -15.97413 -15.56732 -15.40554 -15.12329 -14.88918 -14.76861 -14.61015 -14.41806 -14.32189 -14.12883 -14.00564 -13.94116 -13.65518 -13.41379 -13.35340 -13.10942 -13.02270 -12.91428 -12.78965 -12.64837 -12.40155 -12.34740 -12.03555 -11.83311 -11.70774 -11.54789 -11.47687 -11.12151 -11.02075 -10.44547 -10.37825 -10.08998 -9.76015 -5.01450 -0.48509 -0.03129 1.13573 1.23354 1.55416 1.59125 1.64357 1.82424 1.94885 2.48161 2.63418 2.95528 2.97476 3.20694 3.27689 3.30021 3.33979 3.44670 3.49922 3.63352 3.81211 3.84877 3.91545 3.96985 4.04406 4.07364 4.18794 4.22583 4.25822 4.34765 4.42090 4.44157 4.44498 4.52434 4.54283 4.60954 4.66415 4.69702 4.76443 4.78787 4.89486 4.95484 4.96643 4.98379 5.00200 5.08944 5.17928 5.42473 5.44065 6.15172 6.26252 6.47189 6.55717 6.72462 6.99111 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.470 3.530 5 O -0.504 6.504 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.146 4.146 9 C 0.097 3.903 10 O -0.529 6.529 11 C 0.104 3.896 12 N -0.729 5.729 13 C 0.564 3.436 14 O -0.525 6.525 15 C -0.139 4.139 16 C -0.044 4.044 17 C -0.151 4.151 18 C -0.055 4.055 19 O -0.531 6.531 20 Si 0.677 3.323 21 C 0.161 3.839 22 O -0.483 6.483 23 C -0.117 4.117 24 C -0.115 4.115 25 C -0.067 4.067 26 C -0.100 4.100 27 H 0.067 0.933 28 H 0.068 0.932 29 H 0.081 0.919 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.090 0.910 33 H 0.098 0.902 34 H 0.378 0.622 35 H 0.087 0.913 36 H 0.086 0.914 37 H 0.396 0.604 38 H 0.146 0.854 39 H 0.112 0.888 40 H 0.378 0.622 41 H -0.249 1.249 42 H -0.255 1.255 43 H 0.394 0.606 44 H 0.073 0.927 45 H 0.078 0.922 46 H 0.071 0.929 47 H 0.131 0.869 48 H 0.115 0.885 49 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.354 1.763 -1.240 5.771 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.392 6.392 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.183 4.183 9 C 0.055 3.945 10 O -0.335 6.335 11 C -0.020 4.020 12 N -0.383 5.383 13 C 0.351 3.649 14 O -0.402 6.402 15 C -0.142 4.142 16 C -0.062 4.062 17 C -0.152 4.152 18 C -0.166 4.166 19 O -0.336 6.336 20 Si 0.578 3.422 21 C 0.116 3.884 22 O -0.294 6.294 23 C -0.117 4.117 24 C -0.172 4.172 25 C -0.085 4.085 26 C -0.138 4.138 27 H 0.086 0.914 28 H 0.087 0.913 29 H 0.100 0.900 30 H 0.090 0.910 31 H 0.089 0.911 32 H 0.109 0.891 33 H 0.117 0.883 34 H 0.226 0.774 35 H 0.105 0.895 36 H 0.104 0.896 37 H 0.232 0.768 38 H 0.163 0.837 39 H 0.129 0.871 40 H 0.225 0.775 41 H -0.174 1.174 42 H -0.179 1.179 43 H 0.251 0.749 44 H 0.091 0.909 45 H 0.097 0.903 46 H 0.090 0.910 47 H 0.149 0.851 48 H 0.133 0.867 49 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -4.188 0.370 -0.939 4.308 hybrid contribution -1.398 0.493 0.739 1.656 sum -5.586 0.863 -0.200 5.656 Atomic orbital electron populations 1.21822 0.92317 1.03284 1.03647 1.23095 0.95627 0.79844 1.02780 1.86515 1.24367 1.32766 1.83664 1.23522 0.80708 0.92302 0.72178 1.90692 1.60510 1.42909 1.45057 1.22409 0.97302 0.91042 1.01362 0.85001 1.23713 0.98224 1.01007 0.95395 1.22418 0.93631 0.85538 0.92911 1.86609 1.96258 1.14330 1.36286 1.21976 0.99737 0.91255 0.89010 1.45776 1.33277 1.33428 1.25800 1.18102 0.81919 0.84142 0.80704 1.90839 1.29921 1.44815 1.74579 1.19767 0.98872 0.98104 0.97492 1.20949 0.97836 0.95667 0.91768 1.20699 0.99263 0.95994 0.99262 1.24865 0.94780 1.00399 0.96565 1.86559 1.53630 1.41644 1.51769 0.94646 0.84341 0.75532 0.87702 1.18322 0.92619 0.86849 0.90628 1.84790 1.70132 1.34738 1.39715 1.20219 0.98190 0.97552 0.95750 1.20747 0.94967 0.98555 1.02916 1.21065 0.95785 0.93263 0.98430 1.23044 0.93220 0.96590 1.00916 0.91398 0.91340 0.89984 0.91035 0.91110 0.89102 0.88321 0.77404 0.89523 0.89563 0.76791 0.83724 0.87059 0.77473 1.17385 1.17890 0.74874 0.90850 0.90309 0.90958 0.85115 0.86680 0.88676 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.28 10.29 37.16 0.38 0.67 16 2 C 0.06 0.00 6.19 37.16 0.23 0.23 16 3 O -0.36 -0.47 10.22 -39.24 -0.40 -0.87 16 4 C 0.47 0.72 7.48 36.00 0.27 0.99 16 5 O -0.50 -2.18 15.65 -18.76 -0.29 -2.47 16 6 C -0.10 0.13 4.20 -90.96 -0.38 -0.25 16 7 H 0.13 -0.27 8.14 -51.93 -0.42 -0.70 16 8 C -0.15 0.44 7.03 -25.78 -0.18 0.26 16 9 C 0.10 -0.27 1.42 -89.69 -0.13 -0.40 16 10 O -0.53 1.41 13.42 -35.23 -0.47 0.94 16 11 C 0.10 -0.20 5.27 -4.04 -0.02 -0.22 16 12 N -0.73 1.88 5.27 -61.33 -0.32 1.56 16 13 C 0.56 0.35 7.76 -12.44 -0.10 0.25 16 14 O -0.53 -2.28 16.34 5.29 0.09 -2.20 16 15 C -0.14 0.06 5.88 -104.96 -0.62 -0.56 16 16 C -0.04 -0.01 8.20 -39.22 -0.32 -0.33 16 17 C -0.15 0.00 5.27 -104.54 -0.55 -0.55 16 18 C -0.06 0.00 2.37 36.01 0.09 0.08 16 19 O -0.53 -0.55 12.88 -35.23 -0.45 -1.00 16 20 Si 0.68 -0.09 29.91 -169.99 -5.08 -5.17 16 21 C 0.16 -0.03 6.66 -39.02 -0.26 -0.29 16 22 O -0.48 0.20 11.84 -18.86 -0.22 -0.02 16 23 C -0.12 0.17 5.89 -104.54 -0.62 -0.44 16 24 C -0.12 0.35 9.78 36.01 0.35 0.71 16 25 C -0.07 0.16 9.18 -39.22 -0.36 -0.20 16 26 C -0.10 0.14 6.78 -25.94 -0.18 -0.04 16 27 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 28 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 29 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 30 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 31 H 0.07 0.00 8.13 -51.93 -0.42 -0.42 16 32 H 0.09 -0.39 8.14 -51.93 -0.42 -0.81 16 33 H 0.10 -0.26 8.00 -51.93 -0.42 -0.67 16 34 H 0.38 -2.27 7.60 45.56 0.35 -1.92 16 35 H 0.09 -0.10 8.06 -51.93 -0.42 -0.52 16 36 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 37 H 0.40 -2.21 5.35 -40.82 -0.22 -2.43 16 38 H 0.15 -0.02 4.69 -52.49 -0.25 -0.27 16 39 H 0.11 -0.02 7.82 -51.93 -0.41 -0.43 16 40 H 0.38 -0.98 8.70 45.56 0.40 -0.58 16 41 H -0.25 -0.69 7.11 56.52 0.40 -0.29 16 42 H -0.25 -0.60 7.11 56.52 0.40 -0.20 16 43 H 0.39 -1.82 9.06 45.56 0.41 -1.40 16 44 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 45 H 0.08 -0.16 7.52 -51.93 -0.39 -0.55 16 46 H 0.07 -0.30 8.08 -51.93 -0.42 -0.72 16 47 H 0.13 -0.74 6.40 -52.49 -0.34 -1.07 16 48 H 0.11 -0.09 7.39 -51.93 -0.38 -0.48 16 49 H 0.09 -0.12 8.14 -51.93 -0.42 -0.55 16 LS Contribution 409.46 15.07 6.17 6.17 Total: 0.00 -11.65 409.46 -8.89 -20.54 By element: Atomic # 1 Polarization: -11.88 SS G_CDS: -5.50 Total: -17.38 kcal Atomic # 6 Polarization: 2.30 SS G_CDS: -2.39 Total: -0.09 kcal Atomic # 7 Polarization: 1.88 SS G_CDS: -0.32 Total: 1.56 kcal Atomic # 8 Polarization: -3.87 SS G_CDS: -1.76 Total: -5.63 kcal Atomic # 14 Polarization: -0.09 SS G_CDS: -5.08 Total: -5.17 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -11.65 -8.89 -20.54 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_13287732.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -167.059 kcal (2) G-P(sol) polarization free energy of solvation -11.651 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -178.710 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.887 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.538 kcal (6) G-S(sol) free energy of system = (1) + (5) -187.597 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds