Wall clock time and date at job start Sun Mar 7 2021 07:04:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.45199 * 109.47191 * 2 1 4 4 C 1.34224 * 117.00347 * 180.02562 * 3 2 1 5 5 O 1.20832 * 119.99791 * 359.97438 * 4 3 2 6 6 C 1.50698 * 120.00535 * 179.97438 * 4 3 2 7 7 H 1.09003 * 112.84636 * 311.19423 * 6 4 3 8 8 C 1.53781 * 113.61565 * 82.49826 * 6 4 3 9 9 C 1.54049 * 87.08031 * 139.97986 * 8 6 4 10 10 O 1.42907 * 113.61025 * 89.07067 * 9 8 6 11 11 C 1.52990 * 113.70090 * 220.05426 * 9 8 6 12 12 N 1.46506 * 109.47145 * 282.42454 * 11 9 8 13 13 C 1.34768 * 120.00155 * 179.97438 * 12 11 9 14 14 O 1.21592 * 120.00061 * 359.97438 * 13 12 11 15 15 C 1.47607 * 120.00291 * 180.02562 * 13 12 11 16 16 C 1.39711 * 120.09029 * 179.72906 * 15 13 12 17 17 C 1.37724 * 119.90786 * 179.71939 * 16 15 13 18 18 C 1.50702 * 119.95286 * 180.25092 * 17 16 15 19 19 O 1.42905 * 109.47112 * 105.30065 * 18 17 16 20 20 Si 1.86295 * 109.47325 * 345.29979 * 18 17 16 21 21 C 1.38973 * 120.08806 * 0.54593 * 17 16 15 22 22 O 1.35719 * 119.90954 * 179.70054 * 21 17 16 23 23 C 1.39007 * 120.17785 * 359.72811 * 21 17 16 24 24 C 1.50703 * 119.95693 * 179.97438 * 23 21 17 25 25 C 1.37678 * 120.09049 * 359.97438 * 23 21 17 26 26 C 1.53781 * 113.61793 * 179.97438 * 6 4 3 27 27 H 1.08996 * 109.47135 * 300.00510 * 1 2 3 28 28 H 1.09002 * 109.46765 * 60.00332 * 1 2 3 29 29 H 1.09004 * 109.47019 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47769 * 239.99816 * 2 1 3 31 31 H 1.09005 * 109.47076 * 119.99260 * 2 1 3 32 32 H 1.09005 * 113.61471 * 254.53569 * 8 6 4 33 33 H 1.08996 * 113.61178 * 25.34912 * 8 6 4 34 34 H 0.96698 * 113.99817 * 82.62157 * 10 9 8 35 35 H 1.09003 * 109.47414 * 42.42054 * 11 9 8 36 36 H 1.08995 * 109.48071 * 162.42157 * 11 9 8 37 37 H 0.97005 * 119.99558 * 359.97438 * 12 11 9 38 38 H 1.07999 * 120.04398 * 359.97438 * 16 15 13 39 39 H 1.08999 * 109.46898 * 225.29550 * 18 17 16 40 40 H 0.96697 * 113.99432 * 299.99451 * 19 18 17 41 41 H 1.48499 * 109.99993 * 180.02562 * 20 18 17 42 42 H 1.48507 * 109.99773 * 301.31909 * 20 18 17 43 43 H 0.96698 * 113.99864 * 270.02517 * 22 21 17 44 44 H 1.09000 * 109.47080 * 270.01564 * 24 23 21 45 45 H 1.09002 * 109.46907 * 30.01687 * 24 23 21 46 46 H 1.08996 * 109.47266 * 150.02138 * 24 23 21 47 47 H 1.08000 * 120.04897 * 180.02562 * 25 23 21 48 48 H 1.09002 * 113.61445 * 334.56799 * 26 6 4 49 49 H 1.09002 * 113.61408 * 105.38530 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3446 1.5449 -0.0005 5 8 4.0807 0.5866 -0.0005 6 6 3.9207 2.9374 -0.0012 7 1 3.4709 3.5812 -0.7571 8 6 3.9867 3.5774 1.3956 9 6 5.3592 4.1437 0.9849 10 8 5.2841 5.4207 0.3478 11 6 6.4034 4.0959 2.1020 12 7 6.1535 5.1837 3.0509 13 6 6.9536 5.3387 4.1243 14 8 7.8826 4.5754 4.3054 15 6 6.7014 6.4343 5.0808 16 6 7.5263 6.5933 6.1971 17 6 7.2911 7.6204 7.0840 18 6 8.1837 7.7961 8.2855 19 8 9.0535 8.9100 8.0739 20 14 9.1989 6.2543 8.5360 21 6 6.2282 8.4911 6.8758 22 8 5.9961 9.4983 7.7554 23 6 5.4018 8.3329 5.7693 24 6 4.2502 9.2796 5.5486 25 6 5.6338 7.3124 4.8747 26 6 5.4582 2.9681 -0.0011 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 1.8934 -0.5138 -0.8899 31 1 1.8933 -0.5137 0.8901 32 1 3.2296 4.3440 1.5609 33 1 4.0376 2.8510 2.2067 34 1 5.2216 6.1641 0.9631 35 1 6.3375 3.1393 2.6203 36 1 7.3993 4.2091 1.6737 37 1 5.4121 5.7924 2.9066 38 1 8.3496 5.9141 6.3622 39 1 7.5717 7.9759 9.1695 40 1 9.6288 8.8186 7.3021 41 1 10.0829 6.4147 9.7183 42 1 8.3055 5.0832 8.7255 43 1 5.4020 9.2588 8.4797 44 1 3.3598 8.8898 6.0418 45 1 4.4980 10.2562 5.9646 46 1 4.0600 9.3775 4.4799 47 1 4.9916 7.1903 4.0151 48 1 5.9127 2.0753 0.4282 49 1 5.8895 3.2413 -0.9641 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_13287732.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:04 Heat of formation + Delta-G solvation = -193.517028 kcal Electronic energy + Delta-G solvation = -33071.601640 eV Core-core repulsion = 28352.525154 eV Total energy + Delta-G solvation = -4719.076486 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.16460 -41.68146 -40.75667 -39.96691 -37.85798 -37.76838 -37.49399 -36.01502 -35.45253 -33.97135 -32.69509 -32.07961 -29.54498 -27.97508 -27.05504 -26.90129 -26.35149 -24.50222 -23.66540 -22.12550 -21.86409 -21.59989 -20.76241 -19.57475 -19.35119 -18.73834 -18.11003 -17.82409 -17.71704 -17.36470 -17.07391 -16.90623 -16.48893 -16.45276 -16.07367 -15.93578 -15.55742 -15.36117 -15.10739 -14.82485 -14.70063 -14.52097 -14.29830 -14.22314 -14.13276 -13.86693 -13.79110 -13.50097 -13.28457 -13.25917 -12.98126 -12.89660 -12.83391 -12.71705 -12.57071 -12.34752 -12.26757 -12.21197 -11.75330 -11.61384 -11.58437 -11.47635 -11.13275 -10.89599 -10.46816 -10.33775 -9.96472 -9.65172 -5.05778 -0.40019 0.08341 1.04610 1.20701 1.52878 1.60279 1.61472 1.84612 1.91380 2.56514 2.87290 3.10519 3.12539 3.35340 3.38657 3.43414 3.47015 3.58041 3.60320 3.75442 3.90544 3.94905 4.02429 4.03671 4.17080 4.21683 4.30006 4.33668 4.34528 4.43833 4.59676 4.62470 4.66877 4.71034 4.74137 4.80098 4.83176 4.87133 4.87651 4.92410 5.04651 5.07715 5.10907 5.13482 5.18272 5.23642 5.34031 5.41362 5.60329 6.32336 6.63474 6.65322 6.69430 6.71810 7.05422 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.101 4.101 7 H 0.145 0.855 8 C -0.136 4.136 9 C 0.115 3.885 10 O -0.537 6.537 11 C 0.107 3.893 12 N -0.709 5.709 13 C 0.562 3.438 14 O -0.571 6.571 15 C -0.150 4.150 16 C -0.056 4.056 17 C -0.160 4.160 18 C -0.051 4.051 19 O -0.548 6.548 20 Si 0.742 3.258 21 C 0.154 3.846 22 O -0.497 6.497 23 C -0.120 4.120 24 C -0.113 4.113 25 C -0.053 4.053 26 C -0.109 4.109 27 H 0.070 0.930 28 H 0.069 0.931 29 H 0.095 0.905 30 H 0.066 0.934 31 H 0.067 0.933 32 H 0.114 0.886 33 H 0.094 0.906 34 H 0.394 0.606 35 H 0.077 0.923 36 H 0.074 0.926 37 H 0.414 0.586 38 H 0.140 0.860 39 H 0.112 0.888 40 H 0.392 0.608 41 H -0.289 1.289 42 H -0.290 1.290 43 H 0.409 0.591 44 H 0.084 0.916 45 H 0.066 0.934 46 H 0.089 0.911 47 H 0.168 0.832 48 H 0.103 0.897 49 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.327 3.247 -2.106 8.287 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.313 3.687 5 O -0.429 6.429 6 C -0.120 4.120 7 H 0.163 0.837 8 C -0.174 4.174 9 C 0.073 3.927 10 O -0.345 6.345 11 C -0.017 4.017 12 N -0.363 5.363 13 C 0.351 3.649 14 O -0.451 6.451 15 C -0.153 4.153 16 C -0.075 4.075 17 C -0.161 4.161 18 C -0.163 4.163 19 O -0.356 6.356 20 Si 0.648 3.352 21 C 0.108 3.892 22 O -0.310 6.310 23 C -0.121 4.121 24 C -0.169 4.169 25 C -0.071 4.071 26 C -0.146 4.146 27 H 0.089 0.911 28 H 0.088 0.912 29 H 0.114 0.886 30 H 0.085 0.915 31 H 0.086 0.914 32 H 0.132 0.868 33 H 0.113 0.887 34 H 0.245 0.755 35 H 0.096 0.904 36 H 0.092 0.908 37 H 0.253 0.747 38 H 0.157 0.843 39 H 0.130 0.870 40 H 0.242 0.758 41 H -0.216 1.216 42 H -0.216 1.216 43 H 0.270 0.730 44 H 0.103 0.897 45 H 0.085 0.915 46 H 0.108 0.892 47 H 0.186 0.814 48 H 0.122 0.878 49 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -6.210 1.899 -1.831 6.747 hybrid contribution -0.809 0.021 1.016 1.299 sum -7.019 1.920 -0.815 7.323 Atomic orbital electron populations 1.21823 0.90648 1.04243 1.03790 1.23253 0.96971 0.79433 1.02417 1.86525 1.24308 1.33385 1.83391 1.24120 0.80521 0.93049 0.70961 1.90675 1.61171 1.44276 1.46823 1.22538 0.96949 0.89576 1.02953 0.83731 1.23705 0.98438 1.01155 0.94080 1.22105 0.93366 0.85400 0.91782 1.86592 1.96197 1.14645 1.37115 1.21891 0.99577 0.91053 0.89199 1.45577 1.33020 1.33188 1.24560 1.18309 0.81539 0.83852 0.81212 1.90819 1.32011 1.46534 1.75753 1.19763 0.99793 0.98476 0.97253 1.21000 0.98213 0.95831 0.92432 1.20620 0.99734 0.96490 0.99243 1.24808 0.94721 0.99785 0.96945 1.86511 1.54147 1.42075 1.52852 0.93805 0.81947 0.73678 0.85752 1.18514 0.92777 0.86677 0.91236 1.84741 1.70824 1.35007 1.40452 1.20450 0.98416 0.97983 0.95235 1.20776 0.94553 0.97454 1.04127 1.21388 0.94968 0.91791 0.98983 1.23062 0.93333 0.97002 1.01234 0.91126 0.91233 0.88649 0.91544 0.91437 0.86765 0.88712 0.75531 0.90432 0.90772 0.74725 0.84257 0.87013 0.75842 1.21646 1.21644 0.73036 0.89730 0.91464 0.89229 0.81442 0.87831 0.88880 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.61 10.29 71.98 0.74 1.35 16 2 C 0.05 0.03 6.19 71.98 0.45 0.48 16 3 O -0.36 -1.00 10.22 -51.36 -0.52 -1.52 16 4 C 0.47 1.67 7.48 71.24 0.53 2.20 16 5 O -0.54 -5.44 15.65 21.95 0.34 -5.09 16 6 C -0.10 0.31 4.20 -11.01 -0.05 0.27 16 7 H 0.15 -0.80 8.14 -2.39 -0.02 -0.82 16 8 C -0.14 1.01 7.03 31.21 0.22 1.23 16 9 C 0.12 -0.75 1.42 -10.19 -0.01 -0.77 16 10 O -0.54 4.00 13.42 -148.98 -2.00 2.00 16 11 C 0.11 -0.42 5.27 86.37 0.45 0.04 16 12 N -0.71 4.45 5.27 -466.21 -2.46 2.00 16 13 C 0.56 0.69 7.76 86.72 0.67 1.36 16 14 O -0.57 -5.76 16.34 -4.00 -0.07 -5.82 16 15 C -0.15 0.19 5.88 -20.08 -0.12 0.07 16 16 C -0.06 -0.05 8.20 22.50 0.18 0.13 16 17 C -0.16 -0.05 5.27 -19.81 -0.10 -0.16 16 18 C -0.05 -0.04 2.37 71.24 0.17 0.12 16 19 O -0.55 -1.41 12.88 -148.98 -1.92 -3.33 16 20 Si 0.74 1.14 29.91 68.60 2.05 3.19 16 21 C 0.15 -0.13 6.66 22.63 0.15 0.02 16 22 O -0.50 0.59 11.84 -90.40 -1.07 -0.48 16 23 C -0.12 0.56 5.89 -19.81 -0.12 0.44 16 24 C -0.11 0.95 9.78 71.24 0.70 1.64 16 25 C -0.05 0.36 9.18 22.50 0.21 0.57 16 26 C -0.11 0.27 6.78 31.11 0.21 0.48 16 27 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 28 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 29 H 0.09 -0.65 8.14 -2.38 -0.02 -0.67 16 30 H 0.07 0.09 8.13 -2.39 -0.02 0.07 16 31 H 0.07 0.07 8.13 -2.38 -0.02 0.05 16 32 H 0.11 -1.34 8.14 -2.38 -0.02 -1.36 16 33 H 0.09 -0.57 8.00 -2.39 -0.02 -0.59 16 34 H 0.39 -5.93 7.60 -74.06 -0.56 -6.49 16 35 H 0.08 -0.11 8.06 -2.39 -0.02 -0.13 16 36 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 37 H 0.41 -5.74 5.35 -92.70 -0.50 -6.23 16 38 H 0.14 0.18 4.69 -2.91 -0.01 0.17 16 39 H 0.11 0.04 7.82 -2.39 -0.02 0.03 16 40 H 0.39 -1.85 8.70 -74.06 -0.64 -2.49 16 41 H -0.29 -2.30 7.11 99.48 0.71 -1.59 16 42 H -0.29 -2.08 7.11 99.48 0.71 -1.37 16 43 H 0.41 -3.90 9.06 -74.06 -0.67 -4.57 16 44 H 0.08 -0.88 8.14 -2.39 -0.02 -0.90 16 45 H 0.07 -0.36 7.52 -2.39 -0.02 -0.38 16 46 H 0.09 -1.05 8.08 -2.39 -0.02 -1.06 16 47 H 0.17 -2.55 6.40 -2.91 -0.02 -2.57 16 48 H 0.10 -0.01 7.39 -2.39 -0.02 -0.02 16 49 H 0.09 -0.20 8.14 -2.39 -0.02 -0.22 16 Total: 0.00 -28.79 409.46 -2.65 -31.45 By element: Atomic # 1 Polarization: -30.58 SS G_CDS: -1.30 Total: -31.88 kcal Atomic # 6 Polarization: 5.21 SS G_CDS: 4.29 Total: 9.49 kcal Atomic # 7 Polarization: 4.45 SS G_CDS: -2.46 Total: 2.00 kcal Atomic # 8 Polarization: -9.01 SS G_CDS: -5.24 Total: -14.25 kcal Atomic # 14 Polarization: 1.14 SS G_CDS: 2.05 Total: 3.19 kcal Total: -28.79 -2.65 -31.45 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_13287732.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -162.070 kcal (2) G-P(sol) polarization free energy of solvation -28.794 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -190.864 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.653 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.447 kcal (6) G-S(sol) free energy of system = (1) + (5) -193.517 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds