Wall clock time and date at job start Sun Mar 7 2021 07:04:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 O 1.45192 * 109.47327 * 2 1 4 4 C 1.34233 * 117.00369 * 180.02562 * 3 2 1 5 5 O 1.20822 * 119.99583 * 359.97438 * 4 3 2 6 6 C 1.50700 * 120.00053 * 179.97438 * 4 3 2 7 7 H 1.08993 * 112.91004 * 311.24954 * 6 4 3 8 8 C 1.53962 * 113.66521 * 82.55365 * 6 4 3 9 9 C 1.53782 * 87.11063 * 139.88647 * 8 6 4 10 10 O 1.42895 * 113.61276 * 89.18486 * 9 8 6 11 11 C 1.53003 * 113.61259 * 220.08801 * 9 8 6 12 12 N 1.46501 * 109.47008 * 282.49690 * 11 9 8 13 13 C 1.34780 * 119.99835 * 179.97438 * 12 11 9 14 14 O 1.21611 * 119.99941 * 0.02562 * 13 12 11 15 15 C 1.47372 * 119.99737 * 180.02562 * 13 12 11 16 16 C 1.36420 * 127.18752 * 179.97438 * 15 13 12 17 17 C 1.50699 * 125.80303 * 0.02562 * 16 15 13 18 18 O 1.33652 * 108.39651 * 180.02562 * 16 15 13 19 19 C 1.34224 * 110.90766 * 0.02562 * 18 16 15 20 20 C 1.50694 * 125.43634 * 180.02562 * 19 18 16 21 21 O 1.42905 * 109.46847 * 244.97597 * 20 19 18 22 22 Si 1.86301 * 109.47401 * 4.97233 * 20 19 18 23 23 C 1.34176 * 109.12054 * 359.70542 * 19 18 16 24 24 C 1.53781 * 87.08260 * 334.63747 * 9 8 6 25 25 H 1.08997 * 109.47348 * 180.02562 * 1 2 3 26 26 H 1.09005 * 109.46699 * 300.00272 * 1 2 3 27 27 H 1.08995 * 109.46824 * 59.99745 * 1 2 3 28 28 H 1.09001 * 109.47158 * 239.99871 * 2 1 3 29 29 H 1.09006 * 109.46796 * 119.99733 * 2 1 3 30 30 H 1.08997 * 113.53543 * 25.33321 * 8 6 4 31 31 H 1.08994 * 113.66446 * 254.45524 * 8 6 4 32 32 H 0.96707 * 113.99942 * 82.50612 * 10 9 8 33 33 H 1.09002 * 109.47145 * 42.49807 * 11 9 8 34 34 H 1.08997 * 109.46932 * 162.49761 * 11 9 8 35 35 H 0.96996 * 119.99946 * 0.02562 * 12 11 9 36 36 H 1.08995 * 109.47134 * 89.99831 * 17 16 15 37 37 H 1.09000 * 109.46873 * 209.99499 * 17 16 15 38 38 H 1.08994 * 109.47147 * 329.99426 * 17 16 15 39 39 H 1.08996 * 109.47772 * 124.97425 * 20 19 18 40 40 H 0.96699 * 114.00217 * 59.99704 * 21 20 19 41 41 H 1.48500 * 109.99933 * 58.68144 * 22 20 19 42 42 H 1.48501 * 110.00004 * 180.02562 * 22 20 19 43 43 H 1.08008 * 127.02065 * 180.26921 * 23 19 18 44 44 H 1.09002 * 113.61445 * 139.98212 * 24 9 8 45 45 H 1.09002 * 113.61408 * 270.79943 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5448 -0.0005 5 8 4.0808 0.5866 -0.0005 6 6 3.9208 2.9374 -0.0012 7 1 3.4710 3.5822 -0.7560 8 6 3.9886 3.5787 1.3969 9 6 5.3594 4.1421 0.9866 10 8 5.2862 5.4201 0.3516 11 6 6.4025 4.0914 2.1048 12 7 6.1526 5.1780 3.0552 13 6 6.9517 5.3305 4.1298 14 8 7.8804 4.5664 4.3102 15 6 6.7000 6.4231 5.0861 16 6 7.4101 6.7110 6.2148 17 6 8.6140 5.9555 6.7156 18 8 6.8565 7.7769 6.8010 19 6 5.7973 8.2124 6.1010 20 6 4.9339 9.3923 6.4661 21 8 3.6117 8.9404 6.7658 22 14 5.6505 10.2483 7.9576 23 6 5.6342 7.4337 5.0206 24 6 5.4583 2.9680 -0.0017 25 1 -0.3634 -1.0276 0.0005 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 0.5139 -0.8899 28 1 1.8934 -0.5139 -0.8900 29 1 1.8933 -0.5138 0.8901 30 1 4.0401 2.8516 2.2073 31 1 3.2331 4.3465 1.5631 32 1 5.2239 6.1626 0.9681 33 1 6.3350 3.1341 2.6216 34 1 7.3989 4.2043 1.6777 35 1 5.4116 5.7872 2.9115 36 1 9.5186 6.3916 6.2921 37 1 8.6553 6.0176 7.8031 38 1 8.5386 4.9108 6.4140 39 1 4.8986 10.0896 5.6291 40 1 3.5671 8.3154 7.5023 41 1 7.0371 10.6950 7.6695 42 1 4.8077 11.4135 8.3282 43 1 4.8737 7.5284 4.2595 44 1 5.8893 3.2428 -0.9645 45 1 5.9130 2.0744 0.4260 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_13308374.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:20 Heat of formation + Delta-G solvation = -157.049988 kcal Electronic energy + Delta-G solvation = -29557.291474 eV Core-core repulsion = 25123.560076 eV Total energy + Delta-G solvation = -4433.731397 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.149 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -43.80195 -42.10050 -40.85427 -39.91572 -38.13895 -37.63767 -36.03010 -35.44644 -34.16435 -33.17671 -32.71070 -30.15075 -29.17810 -27.14012 -26.61492 -25.59448 -24.20103 -23.66291 -22.24614 -21.85025 -20.99071 -20.85092 -19.20605 -18.74772 -18.18152 -17.78857 -17.70669 -17.64072 -17.38681 -16.89828 -16.73896 -16.39052 -16.08226 -15.94556 -15.77239 -15.18553 -14.94936 -14.70091 -14.44204 -14.31906 -14.24113 -14.17443 -14.01524 -13.92539 -13.85225 -13.60763 -13.27888 -12.99078 -12.96723 -12.87774 -12.80540 -12.61695 -12.36381 -12.19656 -11.78211 -11.52108 -11.44429 -11.09937 -10.99676 -10.94784 -10.69746 -10.26630 -9.62674 -5.11675 0.24237 0.77359 1.05393 1.16325 1.35550 1.62705 1.68709 1.85277 1.98987 2.27789 2.67640 3.02775 3.09432 3.25667 3.31407 3.34624 3.39539 3.68591 3.70022 3.86002 3.94098 3.99627 4.05759 4.08410 4.16653 4.26744 4.28350 4.33619 4.45938 4.48744 4.50733 4.56755 4.64692 4.69260 4.71970 4.76803 4.79014 4.82218 4.99612 5.01018 5.03439 5.15197 5.22468 5.46712 5.84827 6.25205 6.28431 6.34188 6.75284 7.11374 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.471 3.529 5 O -0.505 6.505 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.145 4.145 9 C 0.097 3.903 10 O -0.530 6.530 11 C 0.105 3.895 12 N -0.726 5.726 13 C 0.596 3.404 14 O -0.534 6.534 15 C -0.255 4.255 16 C 0.098 3.902 17 C -0.088 4.088 18 O -0.167 6.167 19 C -0.054 4.054 20 C -0.028 4.028 21 O -0.530 6.530 22 Si 0.703 3.297 23 C -0.149 4.149 24 C -0.100 4.100 25 H 0.081 0.919 26 H 0.067 0.933 27 H 0.067 0.933 28 H 0.071 0.929 29 H 0.071 0.929 30 H 0.098 0.902 31 H 0.091 0.909 32 H 0.378 0.622 33 H 0.085 0.915 34 H 0.084 0.916 35 H 0.397 0.603 36 H 0.092 0.908 37 H 0.083 0.917 38 H 0.111 0.889 39 H 0.134 0.866 40 H 0.384 0.616 41 H -0.253 1.253 42 H -0.246 1.246 43 H 0.158 0.842 44 H 0.094 0.906 45 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.224 1.451 2.669 4.430 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.273 6.273 4 C 0.314 3.686 5 O -0.392 6.392 6 C -0.122 4.122 7 H 0.150 0.850 8 C -0.183 4.183 9 C 0.055 3.945 10 O -0.336 6.336 11 C -0.018 4.018 12 N -0.380 5.380 13 C 0.384 3.616 14 O -0.412 6.412 15 C -0.260 4.260 16 C 0.045 3.955 17 C -0.144 4.144 18 O -0.064 6.064 19 C -0.103 4.103 20 C -0.138 4.138 21 O -0.336 6.336 22 Si 0.602 3.398 23 C -0.169 4.169 24 C -0.138 4.138 25 H 0.100 0.900 26 H 0.086 0.914 27 H 0.087 0.913 28 H 0.089 0.911 29 H 0.089 0.911 30 H 0.117 0.883 31 H 0.109 0.891 32 H 0.227 0.773 33 H 0.104 0.896 34 H 0.102 0.898 35 H 0.232 0.768 36 H 0.111 0.889 37 H 0.102 0.898 38 H 0.130 0.870 39 H 0.151 0.849 40 H 0.232 0.768 41 H -0.177 1.177 42 H -0.170 1.170 43 H 0.175 0.825 44 H 0.113 0.887 45 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -2.056 1.488 2.336 3.449 hybrid contribution -0.659 0.284 -0.543 0.900 sum -2.715 1.772 1.793 3.705 Atomic orbital electron populations 1.21822 0.92317 1.03270 1.03660 1.23094 0.95631 0.79861 1.02765 1.86518 1.24364 1.32749 1.83662 1.23513 0.80701 0.92281 0.72148 1.90686 1.60519 1.42903 1.45095 1.22442 0.97270 0.91036 1.01403 0.85030 1.23693 0.98256 1.00994 0.95322 1.22367 0.93693 0.85490 0.92903 1.86594 1.96277 1.14367 1.36373 1.21946 0.99604 0.91303 0.88988 1.45641 1.33397 1.33406 1.25525 1.17125 0.81453 0.82948 0.80045 1.90800 1.30376 1.45210 1.74807 1.21064 1.02156 1.02350 1.00399 1.22935 0.95327 0.85928 0.91306 1.20718 0.91051 1.00304 1.02306 1.83685 1.36942 1.38428 1.47366 1.22622 0.91672 1.01371 0.94594 1.24421 0.84487 0.94345 1.10558 1.86562 1.23884 1.66284 1.56884 0.94168 0.79396 0.82927 0.83273 1.22558 0.99613 0.95330 0.99395 1.23048 0.93229 0.96626 1.00863 0.89991 0.91382 0.91347 0.91057 0.91105 0.88337 0.89072 0.77325 0.89638 0.89801 0.76789 0.88930 0.89810 0.87049 0.84914 0.76762 1.17730 1.17033 0.82483 0.88728 0.86701 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.23 10.29 37.16 0.38 0.62 16 2 C 0.06 0.03 6.19 37.16 0.23 0.26 16 3 O -0.36 -0.64 10.22 -39.27 -0.40 -1.04 16 4 C 0.47 0.95 7.49 36.01 0.27 1.22 16 5 O -0.50 -2.39 15.65 -18.75 -0.29 -2.68 16 6 C -0.10 0.06 4.21 -90.86 -0.38 -0.32 16 7 H 0.13 -0.18 8.14 -51.93 -0.42 -0.60 16 8 C -0.14 0.31 7.02 -25.82 -0.18 0.13 16 9 C 0.10 -0.18 1.42 -89.80 -0.13 -0.31 16 10 O -0.53 0.85 13.42 -35.23 -0.47 0.37 16 11 C 0.11 -0.10 5.26 -4.04 -0.02 -0.12 16 12 N -0.73 0.92 5.32 -61.40 -0.33 0.59 16 13 C 0.60 1.06 7.81 -12.54 -0.10 0.96 16 14 O -0.53 -2.58 14.84 5.27 0.08 -2.50 16 15 C -0.26 -0.24 6.31 -103.28 -0.65 -0.90 16 16 C 0.10 0.08 7.37 -34.96 -0.26 -0.17 16 17 C -0.09 0.06 9.89 36.01 0.36 0.42 16 18 O -0.17 -0.06 8.90 7.63 0.07 0.01 16 19 C -0.05 0.03 6.18 -35.74 -0.22 -0.19 16 20 C -0.03 0.05 2.97 36.00 0.11 0.16 16 21 O -0.53 0.92 12.88 -35.23 -0.45 0.47 16 22 Si 0.70 -1.26 32.09 -169.99 -5.46 -6.72 16 23 C -0.15 0.10 10.48 -37.46 -0.39 -0.29 16 24 C -0.10 0.07 6.79 -25.92 -0.18 -0.10 16 25 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 26 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 27 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.07 0.04 8.13 -51.93 -0.42 -0.39 16 29 H 0.07 0.03 8.13 -51.93 -0.42 -0.40 16 30 H 0.10 -0.18 7.99 -51.93 -0.41 -0.59 16 31 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 32 H 0.38 -1.76 7.60 45.56 0.35 -1.42 16 33 H 0.09 -0.03 8.05 -51.93 -0.42 -0.45 16 34 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 35 H 0.40 -1.53 6.50 -40.82 -0.27 -1.79 16 36 H 0.09 -0.11 8.14 -51.93 -0.42 -0.54 16 37 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 38 H 0.11 0.06 6.48 -51.93 -0.34 -0.28 16 39 H 0.13 -0.31 7.96 -51.93 -0.41 -0.72 16 40 H 0.38 -2.03 8.70 45.56 0.40 -1.64 16 41 H -0.25 -0.33 7.11 56.52 0.40 0.08 16 42 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 43 H 0.16 -0.48 7.74 -52.48 -0.41 -0.88 16 44 H 0.09 -0.06 8.14 -51.93 -0.42 -0.48 16 45 H 0.11 -0.02 7.39 -51.93 -0.38 -0.41 16 LS Contribution 385.17 15.07 5.80 5.80 Total: 0.00 -9.72 385.17 -8.36 -18.08 By element: Atomic # 1 Polarization: -8.00 SS G_CDS: -5.74 Total: -13.74 kcal Atomic # 6 Polarization: 2.52 SS G_CDS: -1.16 Total: 1.36 kcal Atomic # 7 Polarization: 0.92 SS G_CDS: -0.33 Total: 0.59 kcal Atomic # 8 Polarization: -3.90 SS G_CDS: -1.48 Total: -5.37 kcal Atomic # 14 Polarization: -1.26 SS G_CDS: -5.46 Total: -6.72 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -9.72 -8.36 -18.08 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_13308374.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -138.973 kcal (2) G-P(sol) polarization free energy of solvation -9.718 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.691 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.359 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.077 kcal (6) G-S(sol) free energy of system = (1) + (5) -157.050 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds