Wall clock time and date at job start Sun Mar 7 2021 07:04:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.45200 * 109.46891 * 2 1 4 4 C 1.34230 * 116.99916 * 180.02562 * 3 2 1 5 5 O 1.20819 * 120.00182 * 359.97438 * 4 3 2 6 6 C 1.50699 * 119.99859 * 179.97438 * 4 3 2 7 7 H 1.09002 * 112.84893 * 48.80862 * 6 4 3 8 8 C 1.53784 * 113.61435 * 179.97438 * 6 4 3 9 9 C 1.53788 * 87.08153 * 140.06694 * 8 6 4 10 10 O 1.42902 * 113.61188 * 89.19994 * 9 8 6 11 11 C 1.52996 * 113.61507 * 220.01982 * 9 8 6 12 12 N 1.46497 * 109.46976 * 180.02562 * 11 9 8 13 13 C 1.34775 * 120.00312 * 180.02562 * 12 11 9 14 14 O 1.21591 * 119.99431 * 0.02562 * 13 12 11 15 15 C 1.47532 * 120.00612 * 180.02562 * 13 12 11 16 16 C 1.40133 * 120.19562 * 179.97438 * 15 13 12 17 17 O 1.35655 * 120.14989 * 0.02562 * 16 15 13 18 18 C 1.38704 * 119.70246 * 179.72599 * 16 15 13 19 19 C 1.38056 * 120.08616 * 0.27615 * 18 16 15 20 20 C 1.50694 * 119.81043 * 179.97438 * 19 18 16 21 21 O 1.42900 * 109.47640 * 64.99558 * 20 19 18 22 22 Si 1.86295 * 109.47470 * 185.00009 * 20 19 18 23 23 C 1.38547 * 120.38558 * 359.97322 * 19 18 16 24 24 C 1.37783 * 120.30329 * 0.02562 * 23 19 18 25 25 C 1.53779 * 87.08156 * 334.57221 * 9 8 6 26 26 H 1.08998 * 109.46752 * 180.02562 * 1 2 3 27 27 H 1.09004 * 109.47298 * 300.00092 * 1 2 3 28 28 H 1.09003 * 109.47369 * 59.99909 * 1 2 3 29 29 H 1.08997 * 109.47020 * 240.00175 * 2 1 3 30 30 H 1.08999 * 109.47037 * 119.99724 * 2 1 3 31 31 H 1.08998 * 113.60980 * 25.52047 * 8 6 4 32 32 H 1.08996 * 113.61249 * 254.61600 * 8 6 4 33 33 H 0.96700 * 113.99832 * 181.53141 * 10 9 8 34 34 H 1.09000 * 109.46909 * 60.00379 * 11 9 8 35 35 H 1.08991 * 109.47327 * 299.99789 * 11 9 8 36 36 H 0.96999 * 120.00379 * 0.02562 * 12 11 9 37 37 H 0.96696 * 114.00102 * 269.72245 * 17 16 15 38 38 H 1.08004 * 119.96378 * 180.25466 * 18 16 15 39 39 H 1.09000 * 109.46998 * 304.99747 * 20 19 18 40 40 H 0.96704 * 113.99587 * 59.99723 * 21 20 19 41 41 H 1.48503 * 110.00078 * 58.67778 * 22 20 19 42 42 H 1.48498 * 110.00300 * 179.97438 * 22 20 19 43 43 H 1.08010 * 119.84892 * 180.02562 * 23 19 18 44 44 H 1.08004 * 120.04753 * 180.02562 * 24 23 19 45 45 H 1.08993 * 113.61889 * 139.97986 * 25 9 8 46 46 H 1.09004 * 113.61338 * 270.88781 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0807 0.5868 -0.0005 6 6 3.9206 2.9375 -0.0012 7 1 3.4713 3.5817 0.7547 8 6 5.4581 2.9682 -0.0011 9 6 5.3564 4.1437 -0.9875 10 8 5.2834 5.4208 -0.3505 11 6 6.3985 4.0966 -2.1067 12 7 6.2204 5.2527 -2.9887 13 6 7.0315 5.4206 -4.0518 14 8 7.9109 4.6121 -4.2791 15 6 6.8526 6.5851 -4.9398 16 6 7.6941 6.7638 -6.0460 17 8 8.6774 5.8662 -6.3062 18 6 7.5130 7.8592 -6.8773 19 6 6.5116 8.7717 -6.6117 20 6 6.3209 9.9599 -7.5186 21 8 5.9221 9.5104 -8.8152 22 14 5.0034 11.0732 -6.8149 23 6 5.6809 8.6013 -5.5160 24 6 5.8465 7.5189 -4.6797 25 6 3.9862 3.5786 -1.3974 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3634 0.5139 0.8900 28 1 -0.3634 0.5138 -0.8900 29 1 1.8933 -0.5138 -0.8900 30 1 1.8933 -0.5138 0.8900 31 1 5.9126 2.0757 -0.4309 32 1 5.8893 3.2423 0.9617 33 1 5.1957 6.1623 -0.9650 34 1 6.2738 3.1785 -2.6808 35 1 7.3983 4.1214 -1.6734 36 1 5.5187 5.8974 -2.8076 37 1 9.5222 6.0751 -5.8847 38 1 8.1565 7.9989 -7.7334 39 1 7.2580 10.5109 -7.5975 40 1 5.0938 9.0113 -8.8208 41 1 5.3916 11.5220 -5.4536 42 1 4.8062 12.2493 -7.6999 43 1 4.9000 9.3202 -5.3165 44 1 5.1963 7.3899 -3.8270 45 1 3.2291 4.3452 -1.5619 46 1 4.0383 2.8527 -2.2090 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_13422076.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:30 Heat of formation + Delta-G solvation = -179.821563 kcal Electronic energy + Delta-G solvation = -30845.226737 eV Core-core repulsion = 26282.281749 eV Total energy + Delta-G solvation = -4562.944987 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -42.18618 -41.63803 -40.63674 -39.69190 -38.46330 -37.64855 -37.21841 -36.07892 -35.39580 -33.04217 -32.70536 -31.19747 -29.82182 -27.62078 -27.11755 -26.11840 -24.04091 -23.94088 -23.31278 -21.95228 -21.71351 -20.88703 -19.89790 -19.05018 -18.68073 -18.28693 -17.82371 -17.70578 -17.42046 -17.19899 -16.71905 -16.65040 -16.34766 -16.08518 -16.04362 -15.97538 -15.38561 -15.13691 -15.04170 -14.80838 -14.50764 -14.39742 -14.19319 -13.94755 -13.91600 -13.64253 -13.43675 -13.24829 -13.01355 -12.96856 -12.80517 -12.63575 -12.39276 -12.37287 -12.22850 -11.80212 -11.75649 -11.53112 -11.46363 -11.06444 -10.91491 -10.60376 -10.34505 -10.15901 -9.87079 -5.17690 -0.49788 0.01729 1.11861 1.15196 1.49068 1.60768 1.67669 1.84690 1.86122 2.48221 2.63357 2.98950 3.02915 3.21792 3.28792 3.30411 3.35618 3.39098 3.52242 3.63956 3.84250 3.89259 3.93267 3.98672 4.06029 4.11051 4.25344 4.26949 4.27572 4.43780 4.44796 4.47835 4.59312 4.61040 4.67792 4.71260 4.77978 4.79540 4.86132 4.97398 4.99946 5.02245 5.11781 5.13631 5.44254 5.45625 6.17785 6.27730 6.41445 6.64058 6.74051 7.07319 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.470 3.530 5 O -0.504 6.504 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.100 4.100 9 C 0.097 3.903 10 O -0.529 6.529 11 C 0.105 3.895 12 N -0.730 5.730 13 C 0.561 3.439 14 O -0.512 6.512 15 C -0.165 4.165 16 C 0.174 3.826 17 O -0.476 6.476 18 C -0.128 4.128 19 C -0.075 4.075 20 C -0.075 4.075 21 O -0.536 6.536 22 Si 0.691 3.309 23 C -0.134 4.134 24 C -0.065 4.065 25 C -0.145 4.145 26 H 0.081 0.919 27 H 0.067 0.933 28 H 0.067 0.933 29 H 0.071 0.929 30 H 0.071 0.929 31 H 0.115 0.885 32 H 0.094 0.906 33 H 0.376 0.624 34 H 0.086 0.914 35 H 0.084 0.916 36 H 0.394 0.606 37 H 0.399 0.601 38 H 0.141 0.859 39 H 0.118 0.882 40 H 0.381 0.619 41 H -0.255 1.255 42 H -0.253 1.253 43 H 0.137 0.863 44 H 0.133 0.867 45 H 0.091 0.909 46 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.857 3.557 1.391 6.992 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.392 6.392 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.138 4.138 9 C 0.055 3.945 10 O -0.335 6.335 11 C -0.018 4.018 12 N -0.386 5.386 13 C 0.348 3.652 14 O -0.387 6.387 15 C -0.169 4.169 16 C 0.128 3.872 17 O -0.287 6.287 18 C -0.147 4.147 19 C -0.076 4.076 20 C -0.185 4.185 21 O -0.341 6.341 22 Si 0.592 3.408 23 C -0.152 4.152 24 C -0.084 4.084 25 C -0.183 4.183 26 H 0.100 0.900 27 H 0.086 0.914 28 H 0.086 0.914 29 H 0.089 0.911 30 H 0.089 0.911 31 H 0.133 0.867 32 H 0.113 0.887 33 H 0.225 0.775 34 H 0.104 0.896 35 H 0.102 0.898 36 H 0.230 0.770 37 H 0.257 0.743 38 H 0.159 0.841 39 H 0.135 0.865 40 H 0.228 0.772 41 H -0.180 1.180 42 H -0.177 1.177 43 H 0.154 0.846 44 H 0.151 0.849 45 H 0.110 0.890 46 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -5.019 3.075 1.587 6.096 hybrid contribution 0.522 0.461 -0.108 0.705 sum -4.496 3.537 1.479 5.909 Atomic orbital electron populations 1.21822 0.92309 1.03281 1.03652 1.23096 0.95633 0.79845 1.02780 1.86516 1.24352 1.32761 1.83668 1.23511 0.80715 0.92287 0.72183 1.90689 1.60511 1.42914 1.45046 1.22415 0.97268 0.91069 1.01391 0.85015 1.23058 0.93262 0.96597 1.00868 1.22388 0.93723 0.85470 0.92900 1.86615 1.96062 1.14475 1.36323 1.21946 0.99984 0.89589 0.90315 1.45785 1.36264 1.27947 1.28580 1.18016 0.81635 0.85292 0.80220 1.90863 1.32372 1.43955 1.71496 1.20370 1.01061 0.97657 0.97805 1.18507 0.90246 0.87670 0.90815 1.84766 1.22194 1.47670 1.74108 1.21367 0.99680 0.93042 1.00590 1.20469 0.94791 0.96761 0.95576 1.25192 1.07862 0.98720 0.86759 1.86545 1.45706 1.75998 1.25896 0.94730 0.86203 0.80666 0.79190 1.20929 1.00013 0.98701 0.95514 1.21111 0.95841 0.92786 0.98676 1.23682 0.98192 1.01025 0.95388 0.89991 0.91354 0.91371 0.91091 0.91057 0.86674 0.88704 0.77526 0.89623 0.89823 0.76990 0.74269 0.84144 0.86485 0.77154 1.17983 1.17739 0.84596 0.84928 0.89029 0.88268 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.27 10.29 37.16 0.38 0.66 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.51 10.22 -39.26 -0.40 -0.91 16 4 C 0.47 0.79 7.49 36.01 0.27 1.06 16 5 O -0.50 -2.27 15.65 -18.74 -0.29 -2.57 16 6 C -0.10 0.12 4.19 -90.96 -0.38 -0.26 16 7 H 0.13 -0.26 8.14 -51.93 -0.42 -0.69 16 8 C -0.10 0.12 6.80 -25.91 -0.18 -0.06 16 9 C 0.10 -0.24 1.48 -89.81 -0.13 -0.38 16 10 O -0.53 1.36 13.40 -35.23 -0.47 0.89 16 11 C 0.11 -0.15 5.32 -4.05 -0.02 -0.17 16 12 N -0.73 1.55 5.30 -61.36 -0.33 1.22 16 13 C 0.56 0.77 7.76 -12.47 -0.10 0.67 16 14 O -0.51 -2.77 15.16 -16.59 -0.25 -3.03 16 15 C -0.17 0.00 5.89 -104.85 -0.62 -0.62 16 16 C 0.17 0.20 6.72 -38.70 -0.26 -0.06 16 17 O -0.48 -1.08 11.58 -40.54 -0.47 -1.55 16 18 C -0.13 0.01 9.60 -39.48 -0.38 -0.37 16 19 C -0.08 0.12 5.35 -104.58 -0.56 -0.44 16 20 C -0.07 0.14 2.79 36.00 0.10 0.24 16 21 O -0.54 0.49 12.83 -35.23 -0.45 0.04 16 22 Si 0.69 -1.96 29.78 -169.99 -5.06 -7.03 16 23 C -0.13 0.41 8.64 -39.63 -0.34 0.07 16 24 C -0.07 0.20 9.54 -39.20 -0.37 -0.18 16 25 C -0.15 0.40 7.02 -25.92 -0.18 0.22 16 26 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 27 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 29 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 30 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 31 H 0.12 -0.05 7.39 -51.93 -0.38 -0.44 16 32 H 0.09 -0.10 8.14 -51.93 -0.42 -0.53 16 33 H 0.38 -2.29 7.33 45.56 0.33 -1.95 16 34 H 0.09 -0.04 7.94 -51.93 -0.41 -0.45 16 35 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 36 H 0.39 -2.13 5.06 -40.82 -0.21 -2.34 16 37 H 0.40 -0.55 9.06 45.56 0.41 -0.14 16 38 H 0.14 -0.02 8.06 -52.48 -0.42 -0.45 16 39 H 0.12 -0.17 7.96 -51.93 -0.41 -0.59 16 40 H 0.38 -1.82 8.70 45.56 0.40 -1.42 16 41 H -0.26 0.20 7.11 56.52 0.40 0.60 16 42 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 43 H 0.14 -0.73 4.88 -52.48 -0.26 -0.99 16 44 H 0.13 -0.87 6.40 -52.48 -0.34 -1.20 16 45 H 0.09 -0.38 8.14 -51.93 -0.42 -0.80 16 46 H 0.10 -0.23 7.92 -51.93 -0.41 -0.64 16 LS Contribution 387.17 15.07 5.83 5.83 Total: 0.00 -12.18 387.17 -9.13 -21.32 By element: Atomic # 1 Polarization: -10.12 SS G_CDS: -4.70 Total: -14.83 kcal Atomic # 6 Polarization: 3.15 SS G_CDS: -2.54 Total: 0.61 kcal Atomic # 7 Polarization: 1.55 SS G_CDS: -0.33 Total: 1.22 kcal Atomic # 8 Polarization: -4.79 SS G_CDS: -2.34 Total: -7.13 kcal Atomic # 14 Polarization: -1.96 SS G_CDS: -5.06 Total: -7.03 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -12.18 -9.13 -21.32 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_13422076.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -158.506 kcal (2) G-P(sol) polarization free energy of solvation -12.181 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -170.688 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.134 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.315 kcal (6) G-S(sol) free energy of system = (1) + (5) -179.822 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds