Wall clock time and date at job start Sun Mar 7 2021 07:04:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.45200 * 109.46891 * 2 1 4 4 C 1.34230 * 116.99916 * 180.02562 * 3 2 1 5 5 O 1.20819 * 120.00182 * 359.97438 * 4 3 2 6 6 C 1.50699 * 119.99859 * 179.97438 * 4 3 2 7 7 H 1.09002 * 112.84893 * 48.80862 * 6 4 3 8 8 C 1.53784 * 113.61435 * 179.97438 * 6 4 3 9 9 C 1.53788 * 87.08153 * 140.06694 * 8 6 4 10 10 O 1.42902 * 113.61188 * 89.19994 * 9 8 6 11 11 C 1.52996 * 113.61507 * 220.01982 * 9 8 6 12 12 N 1.46497 * 109.46976 * 180.02562 * 11 9 8 13 13 C 1.34775 * 120.00312 * 180.02562 * 12 11 9 14 14 O 1.21591 * 119.99431 * 0.02562 * 13 12 11 15 15 C 1.47532 * 120.00612 * 180.02562 * 13 12 11 16 16 C 1.40133 * 120.19562 * 179.97438 * 15 13 12 17 17 O 1.35655 * 120.14989 * 0.02562 * 16 15 13 18 18 C 1.38704 * 119.70246 * 179.72599 * 16 15 13 19 19 C 1.38056 * 120.08616 * 0.27615 * 18 16 15 20 20 C 1.50694 * 119.81043 * 179.97438 * 19 18 16 21 21 O 1.42900 * 109.47640 * 64.99558 * 20 19 18 22 22 Si 1.86295 * 109.47470 * 185.00009 * 20 19 18 23 23 C 1.38547 * 120.38558 * 359.97322 * 19 18 16 24 24 C 1.37783 * 120.30329 * 0.02562 * 23 19 18 25 25 C 1.53779 * 87.08156 * 334.57221 * 9 8 6 26 26 H 1.08998 * 109.46752 * 180.02562 * 1 2 3 27 27 H 1.09004 * 109.47298 * 300.00092 * 1 2 3 28 28 H 1.09003 * 109.47369 * 59.99909 * 1 2 3 29 29 H 1.08997 * 109.47020 * 240.00175 * 2 1 3 30 30 H 1.08999 * 109.47037 * 119.99724 * 2 1 3 31 31 H 1.08998 * 113.60980 * 25.52047 * 8 6 4 32 32 H 1.08996 * 113.61249 * 254.61600 * 8 6 4 33 33 H 0.96700 * 113.99832 * 181.53141 * 10 9 8 34 34 H 1.09000 * 109.46909 * 60.00379 * 11 9 8 35 35 H 1.08991 * 109.47327 * 299.99789 * 11 9 8 36 36 H 0.96999 * 120.00379 * 0.02562 * 12 11 9 37 37 H 0.96696 * 114.00102 * 269.72245 * 17 16 15 38 38 H 1.08004 * 119.96378 * 180.25466 * 18 16 15 39 39 H 1.09000 * 109.46998 * 304.99747 * 20 19 18 40 40 H 0.96704 * 113.99587 * 59.99723 * 21 20 19 41 41 H 1.48503 * 110.00078 * 58.67778 * 22 20 19 42 42 H 1.48498 * 110.00300 * 179.97438 * 22 20 19 43 43 H 1.08010 * 119.84892 * 180.02562 * 23 19 18 44 44 H 1.08004 * 120.04753 * 180.02562 * 24 23 19 45 45 H 1.08993 * 113.61889 * 139.97986 * 25 9 8 46 46 H 1.09004 * 113.61338 * 270.88781 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0807 0.5868 -0.0005 6 6 3.9206 2.9375 -0.0012 7 1 3.4713 3.5817 0.7547 8 6 5.4581 2.9682 -0.0011 9 6 5.3564 4.1437 -0.9875 10 8 5.2834 5.4208 -0.3505 11 6 6.3985 4.0966 -2.1067 12 7 6.2204 5.2527 -2.9887 13 6 7.0315 5.4206 -4.0518 14 8 7.9109 4.6121 -4.2791 15 6 6.8526 6.5851 -4.9398 16 6 7.6941 6.7638 -6.0460 17 8 8.6774 5.8662 -6.3062 18 6 7.5130 7.8592 -6.8773 19 6 6.5116 8.7717 -6.6117 20 6 6.3209 9.9599 -7.5186 21 8 5.9221 9.5104 -8.8152 22 14 5.0034 11.0732 -6.8149 23 6 5.6809 8.6013 -5.5160 24 6 5.8465 7.5189 -4.6797 25 6 3.9862 3.5786 -1.3974 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3634 0.5139 0.8900 28 1 -0.3634 0.5138 -0.8900 29 1 1.8933 -0.5138 -0.8900 30 1 1.8933 -0.5138 0.8900 31 1 5.9126 2.0757 -0.4309 32 1 5.8893 3.2423 0.9617 33 1 5.1957 6.1623 -0.9650 34 1 6.2738 3.1785 -2.6808 35 1 7.3983 4.1214 -1.6734 36 1 5.5187 5.8974 -2.8076 37 1 9.5222 6.0751 -5.8847 38 1 8.1565 7.9989 -7.7334 39 1 7.2580 10.5109 -7.5975 40 1 5.0938 9.0113 -8.8208 41 1 5.3916 11.5220 -5.4536 42 1 4.8062 12.2493 -7.6999 43 1 4.9000 9.3202 -5.3165 44 1 5.1963 7.3899 -3.8270 45 1 3.2291 4.3452 -1.5619 46 1 4.0383 2.8527 -2.2090 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_13422076.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:29 Heat of formation + Delta-G solvation = -186.137662 kcal Electronic energy + Delta-G solvation = -30845.500624 eV Core-core repulsion = 26282.281749 eV Total energy + Delta-G solvation = -4563.218874 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -42.17224 -41.62837 -40.60234 -39.68926 -38.44141 -37.75917 -37.13974 -36.00176 -35.35470 -32.94735 -32.65025 -31.10204 -29.75109 -27.53353 -26.96119 -26.07876 -23.89845 -23.88369 -23.27521 -21.94103 -21.69790 -20.77125 -19.83592 -19.02302 -18.72390 -18.20257 -17.80151 -17.71265 -17.37122 -17.16450 -16.68097 -16.58163 -16.22831 -15.99267 -15.95920 -15.91706 -15.33227 -15.10932 -14.94253 -14.72017 -14.48742 -14.38165 -14.12138 -13.83875 -13.79287 -13.50528 -13.33051 -13.19606 -12.97412 -12.88212 -12.74098 -12.56352 -12.29842 -12.27613 -12.18459 -11.74302 -11.69581 -11.57519 -11.45722 -11.01928 -10.89387 -10.49118 -10.34313 -10.03629 -9.77023 -4.96193 -0.41944 0.15715 1.05075 1.30648 1.60700 1.65393 1.71541 1.91789 2.02888 2.56525 2.85620 3.11289 3.12997 3.34525 3.42150 3.45431 3.49800 3.57491 3.69955 3.79349 3.91497 3.95970 4.03546 4.09905 4.22103 4.27872 4.31044 4.33244 4.39653 4.58029 4.59611 4.66357 4.68984 4.76450 4.80801 4.87551 4.88871 4.91063 5.03025 5.11256 5.13270 5.14738 5.19711 5.25844 5.42100 5.60654 6.33976 6.63916 6.64892 6.69797 6.74918 7.09811 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.101 4.101 7 H 0.147 0.853 8 C -0.109 4.109 9 C 0.116 3.884 10 O -0.536 6.536 11 C 0.108 3.892 12 N -0.709 5.709 13 C 0.558 3.442 14 O -0.563 6.563 15 C -0.179 4.179 16 C 0.151 3.849 17 O -0.500 6.500 18 C -0.142 4.142 19 C -0.073 4.073 20 C -0.088 4.088 21 O -0.557 6.557 22 Si 0.792 3.208 23 C -0.129 4.129 24 C -0.050 4.050 25 C -0.135 4.135 26 H 0.095 0.905 27 H 0.069 0.931 28 H 0.070 0.930 29 H 0.067 0.933 30 H 0.066 0.934 31 H 0.102 0.898 32 H 0.093 0.907 33 H 0.393 0.607 34 H 0.074 0.926 35 H 0.069 0.931 36 H 0.413 0.587 37 H 0.407 0.593 38 H 0.130 0.870 39 H 0.108 0.892 40 H 0.397 0.603 41 H -0.273 1.273 42 H -0.306 1.306 43 H 0.168 0.832 44 H 0.176 0.824 45 H 0.117 0.883 46 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.345 5.167 2.336 10.089 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.275 6.275 4 C 0.314 3.686 5 O -0.430 6.430 6 C -0.119 4.119 7 H 0.164 0.836 8 C -0.147 4.147 9 C 0.074 3.926 10 O -0.344 6.344 11 C -0.016 4.016 12 N -0.365 5.365 13 C 0.346 3.654 14 O -0.442 6.442 15 C -0.183 4.183 16 C 0.104 3.896 17 O -0.313 6.313 18 C -0.161 4.161 19 C -0.074 4.074 20 C -0.197 4.197 21 O -0.365 6.365 22 Si 0.697 3.303 23 C -0.146 4.146 24 C -0.068 4.068 25 C -0.173 4.173 26 H 0.113 0.887 27 H 0.088 0.912 28 H 0.089 0.911 29 H 0.085 0.915 30 H 0.084 0.916 31 H 0.120 0.880 32 H 0.111 0.889 33 H 0.245 0.755 34 H 0.092 0.908 35 H 0.087 0.913 36 H 0.253 0.747 37 H 0.266 0.734 38 H 0.148 0.852 39 H 0.125 0.875 40 H 0.247 0.753 41 H -0.199 1.199 42 H -0.235 1.235 43 H 0.185 0.815 44 H 0.193 0.807 45 H 0.135 0.865 46 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -7.550 4.692 2.545 9.246 hybrid contribution 1.306 0.012 -0.431 1.375 sum -6.244 4.704 2.113 8.098 Atomic orbital electron populations 1.21824 0.90589 1.04244 1.03827 1.23256 0.97013 0.79432 1.02393 1.86526 1.24247 1.33374 1.83378 1.24115 0.80545 0.93037 0.70951 1.90673 1.61197 1.44310 1.46843 1.22540 0.96804 0.89612 1.02984 0.83564 1.23075 0.93496 0.96962 1.01193 1.22059 0.93399 0.85439 0.91664 1.86600 1.95997 1.14723 1.37113 1.21852 0.99787 0.89420 0.90532 1.45561 1.35859 1.27853 1.27226 1.18310 0.81222 0.85134 0.80706 1.90838 1.34675 1.45817 1.72907 1.20391 1.02231 0.98151 0.97547 1.18778 0.90633 0.88130 0.92016 1.84721 1.23151 1.48731 1.74685 1.21337 1.00631 0.93602 1.00544 1.20588 0.94488 0.96195 0.96110 1.25475 1.08501 0.99025 0.86655 1.86508 1.47045 1.76434 1.26513 0.93648 0.83629 0.77234 0.75834 1.21262 0.99907 0.99037 0.94357 1.21542 0.94683 0.91230 0.99393 1.23671 0.98389 1.01186 0.94057 0.88668 0.91206 0.91074 0.91469 0.91572 0.88000 0.88856 0.75536 0.90798 0.91283 0.74726 0.73371 0.85186 0.87497 0.75285 1.19913 1.23504 0.81487 0.80684 0.86491 0.88821 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.60 10.29 71.98 0.74 1.34 16 2 C 0.05 0.04 6.19 71.98 0.45 0.49 16 3 O -0.36 -1.04 10.22 -51.41 -0.53 -1.57 16 4 C 0.47 1.81 7.49 71.24 0.53 2.34 16 5 O -0.54 -5.71 15.65 21.98 0.34 -5.36 16 6 C -0.10 0.29 4.19 -11.01 -0.05 0.24 16 7 H 0.15 -0.82 8.14 -2.39 -0.02 -0.84 16 8 C -0.11 0.21 6.80 31.12 0.21 0.42 16 9 C 0.12 -0.70 1.48 -10.27 -0.02 -0.71 16 10 O -0.54 4.03 13.40 -148.98 -2.00 2.03 16 11 C 0.11 -0.28 5.32 86.38 0.46 0.18 16 12 N -0.71 3.73 5.30 -466.30 -2.47 1.26 16 13 C 0.56 1.74 7.76 86.69 0.67 2.41 16 14 O -0.56 -7.30 15.16 16.91 0.26 -7.04 16 15 C -0.18 0.04 5.89 -20.01 -0.12 -0.08 16 16 C 0.15 0.55 6.72 22.84 0.15 0.71 16 17 O -0.50 -3.67 11.58 -68.78 -0.80 -4.47 16 18 C -0.14 -0.15 9.60 22.34 0.21 0.06 16 19 C -0.07 0.27 5.35 -19.84 -0.11 0.17 16 20 C -0.09 0.35 2.79 71.23 0.20 0.55 16 21 O -0.56 1.01 12.83 -148.98 -1.91 -0.90 16 22 Si 0.79 -5.69 29.78 68.60 2.04 -3.65 16 23 C -0.13 1.12 8.64 22.24 0.19 1.31 16 24 C -0.05 0.44 9.54 22.52 0.21 0.65 16 25 C -0.14 0.96 7.02 31.12 0.22 1.18 16 26 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 27 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 28 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 29 H 0.07 0.09 8.13 -2.39 -0.02 0.07 16 30 H 0.07 0.11 8.13 -2.39 -0.02 0.09 16 31 H 0.10 0.09 7.39 -2.39 -0.02 0.07 16 32 H 0.09 -0.16 8.14 -2.39 -0.02 -0.18 16 33 H 0.39 -6.15 7.33 -74.06 -0.54 -6.70 16 34 H 0.07 0.02 7.94 -2.39 -0.02 0.01 16 35 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 36 H 0.41 -5.69 5.06 -92.71 -0.47 -6.16 16 37 H 0.41 0.23 9.06 -74.06 -0.67 -0.44 16 38 H 0.13 0.28 8.06 -2.91 -0.02 0.26 16 39 H 0.11 -0.25 7.96 -2.39 -0.02 -0.27 16 40 H 0.40 -4.05 8.70 -74.05 -0.64 -4.70 16 41 H -0.27 1.10 7.11 99.48 0.71 1.81 16 42 H -0.31 -0.60 7.11 99.48 0.71 0.11 16 43 H 0.17 -2.51 4.88 -2.91 -0.01 -2.53 16 44 H 0.18 -3.14 6.40 -2.91 -0.02 -3.16 16 45 H 0.12 -1.37 8.14 -2.39 -0.02 -1.39 16 46 H 0.09 -0.50 7.92 -2.39 -0.02 -0.52 16 Total: 0.00 -31.85 387.17 -2.31 -34.16 By element: Atomic # 1 Polarization: -24.52 SS G_CDS: -1.22 Total: -25.73 kcal Atomic # 6 Polarization: 7.30 SS G_CDS: 3.97 Total: 11.27 kcal Atomic # 7 Polarization: 3.73 SS G_CDS: -2.47 Total: 1.26 kcal Atomic # 8 Polarization: -12.68 SS G_CDS: -4.63 Total: -17.31 kcal Atomic # 14 Polarization: -5.69 SS G_CDS: 2.04 Total: -3.65 kcal Total: -31.85 -2.31 -34.16 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_13422076.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -151.977 kcal (2) G-P(sol) polarization free energy of solvation -31.854 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -183.832 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.306 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.160 kcal (6) G-S(sol) free energy of system = (1) + (5) -186.138 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds