Wall clock time and date at job start Sun Mar 7 2021 07:04:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45194 * 109.47412 * 2 1 4 4 C 1.34227 * 117.00229 * 180.02562 * 3 2 1 5 5 O 1.20831 * 120.00030 * 359.97438 * 4 3 2 6 6 C 1.50701 * 120.00170 * 179.97438 * 4 3 2 7 7 H 1.08997 * 112.85034 * 311.19425 * 6 4 3 8 8 C 1.54055 * 113.69527 * 82.45975 * 6 4 3 9 9 C 1.53786 * 86.98467 * 139.98803 * 8 6 4 10 10 O 1.42903 * 113.60772 * 89.16391 * 9 8 6 11 11 C 1.52997 * 113.61626 * 219.97663 * 9 8 6 12 12 N 1.46496 * 109.47396 * 284.13972 * 11 9 8 13 13 C 1.34776 * 120.00037 * 180.02562 * 12 11 9 14 14 O 1.21590 * 120.00023 * 359.97438 * 13 12 11 15 15 C 1.47534 * 120.00024 * 180.02562 * 13 12 11 16 16 C 1.40142 * 120.19204 * 179.72104 * 15 13 12 17 17 O 1.35661 * 120.14577 * 359.97438 * 16 15 13 18 18 C 1.38705 * 119.70183 * 179.79039 * 16 15 13 19 19 C 1.50696 * 119.96068 * 180.20757 * 18 16 15 20 20 O 1.42899 * 109.47321 * 75.27643 * 19 18 16 21 21 Si 1.86300 * 109.47403 * 195.28070 * 19 18 16 22 22 C 1.38053 * 120.08284 * 0.48945 * 18 16 15 23 23 C 1.38554 * 120.39024 * 359.73998 * 22 18 16 24 24 C 1.50699 * 119.84740 * 180.02562 * 23 22 18 25 25 C 1.37790 * 120.30096 * 0.02562 * 23 22 18 26 26 C 1.53780 * 87.17287 * 334.57388 * 9 8 6 27 27 H 1.08997 * 109.47220 * 300.00441 * 1 2 3 28 28 H 1.09006 * 109.46798 * 60.00260 * 1 2 3 29 29 H 1.08997 * 109.47019 * 179.97438 * 1 2 3 30 30 H 1.09007 * 109.47099 * 239.99358 * 2 1 3 31 31 H 1.09005 * 109.46867 * 120.00289 * 2 1 3 32 32 H 1.09005 * 113.61539 * 25.48862 * 8 6 4 33 33 H 1.08997 * 113.69669 * 254.50773 * 8 6 4 34 34 H 0.96700 * 114.00311 * 80.86568 * 10 9 8 35 35 H 1.08998 * 109.46862 * 44.14038 * 11 9 8 36 36 H 1.09001 * 109.46941 * 164.13797 * 11 9 8 37 37 H 0.96999 * 120.00105 * 359.97438 * 12 11 9 38 38 H 0.96697 * 114.00116 * 90.00097 * 17 16 15 39 39 H 1.09006 * 109.47114 * 315.27634 * 19 18 16 40 40 H 0.96699 * 114.00343 * 180.02562 * 20 19 18 41 41 H 1.48498 * 109.99788 * 300.00164 * 21 19 18 42 42 H 1.48499 * 109.99936 * 61.31846 * 21 19 18 43 43 H 1.08000 * 119.80938 * 179.76821 * 22 18 16 44 44 H 1.09001 * 109.47062 * 270.01920 * 24 23 22 45 45 H 1.08999 * 109.47407 * 30.02759 * 24 23 22 46 46 H 1.09004 * 109.46744 * 150.02572 * 24 23 22 47 47 H 1.07994 * 120.04718 * 179.97438 * 25 23 22 48 48 H 1.09004 * 113.61199 * 140.02266 * 26 9 8 49 49 H 1.09001 * 113.61194 * 270.92229 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5447 -0.0005 5 8 4.0808 0.5865 -0.0005 6 6 3.9208 2.9373 -0.0012 7 1 3.4710 3.5811 -0.7570 8 6 3.9869 3.5805 1.3971 9 6 5.3569 4.1441 0.9840 10 8 5.2818 5.4206 0.3461 11 6 6.4006 4.0989 2.1018 12 7 6.1266 5.1645 3.0691 13 6 6.9226 5.3182 4.1457 14 8 7.8678 4.5723 4.3145 15 6 6.6463 6.3910 5.1202 16 6 7.4679 6.5508 6.2442 17 8 8.5214 5.7192 6.4419 18 6 7.2015 7.5655 7.1516 19 6 8.0839 7.7456 8.3597 20 8 9.3189 8.3448 7.9625 21 14 7.2284 8.8468 9.5952 22 6 6.1254 8.4070 6.9523 23 6 5.3078 8.2493 5.8448 24 6 4.1368 9.1752 5.6391 25 6 5.5607 7.2497 4.9308 26 6 5.4583 2.9679 -0.0016 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8901 29 1 -0.3633 -1.0276 -0.0005 30 1 1.8933 -0.5140 -0.8900 31 1 1.8933 -0.5139 0.8900 32 1 4.0400 2.8554 2.2093 33 1 3.2309 4.3481 1.5624 34 1 5.1944 6.1626 0.9600 35 1 6.3543 3.1323 2.6032 36 1 7.3943 4.2406 1.6769 37 1 5.3727 5.7598 2.9343 38 1 9.3460 6.0270 6.0416 39 1 8.2808 6.7744 8.8139 40 1 9.9378 8.4904 8.6912 41 1 6.9543 10.1740 8.9881 42 1 5.9580 8.2197 10.0402 43 1 5.9198 9.1933 7.6636 44 1 3.2542 8.7581 6.1241 45 1 4.3634 10.1494 6.0722 46 1 3.9458 9.2877 4.5718 47 1 4.9206 7.1301 4.0693 48 1 5.8893 3.2413 -0.9647 49 1 5.9129 2.0756 0.4288 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_13422088.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:34 Heat of formation + Delta-G solvation = -189.738455 kcal Electronic energy + Delta-G solvation = -33276.988153 eV Core-core repulsion = 28558.075518 eV Total energy + Delta-G solvation = -4718.912635 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.22046 -41.78683 -40.69587 -39.78418 -38.16075 -37.79395 -37.59002 -36.00222 -35.46978 -33.33944 -33.06357 -32.68761 -29.69230 -27.65509 -27.06829 -26.83891 -26.54821 -24.78818 -23.71918 -22.07275 -21.85302 -21.65322 -20.80952 -19.73304 -19.12540 -18.66445 -18.40361 -18.00772 -17.78328 -17.41066 -17.29822 -16.94812 -16.66045 -16.48694 -16.06924 -15.95575 -15.48962 -15.15756 -15.14502 -15.02747 -14.76296 -14.61395 -14.43308 -14.30639 -14.21949 -13.82159 -13.76211 -13.53297 -13.30880 -13.14435 -13.07080 -13.00726 -12.81805 -12.66229 -12.59571 -12.51244 -12.31921 -12.06310 -11.83751 -11.76508 -11.60656 -11.50070 -11.05094 -10.93989 -10.46161 -10.33280 -10.17611 -9.63557 -4.97991 -0.50251 -0.05763 1.01227 1.23349 1.55111 1.56961 1.62789 1.83785 1.89491 2.40998 2.81606 3.07149 3.07737 3.24387 3.28830 3.37484 3.41592 3.49734 3.56780 3.79834 3.86808 3.92945 3.97593 4.00521 4.05028 4.16746 4.22338 4.27384 4.28097 4.42911 4.49603 4.54791 4.59704 4.65015 4.68014 4.75103 4.77247 4.82134 4.84329 4.85767 4.87261 5.04126 5.07410 5.09585 5.10220 5.13559 5.26256 5.38703 5.52217 6.26091 6.59194 6.60642 6.61274 6.82888 7.00940 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.539 6.539 6 C -0.100 4.100 7 H 0.147 0.853 8 C -0.137 4.137 9 C 0.115 3.885 10 O -0.537 6.537 11 C 0.108 3.892 12 N -0.710 5.710 13 C 0.561 3.439 14 O -0.558 6.558 15 C -0.176 4.176 16 C 0.165 3.835 17 O -0.488 6.488 18 C -0.125 4.125 19 C -0.082 4.082 20 O -0.562 6.562 21 Si 0.781 3.219 22 C -0.096 4.096 23 C -0.096 4.096 24 C -0.117 4.117 25 C -0.058 4.058 26 C -0.108 4.108 27 H 0.069 0.931 28 H 0.069 0.931 29 H 0.095 0.905 30 H 0.067 0.933 31 H 0.067 0.933 32 H 0.093 0.907 33 H 0.115 0.885 34 H 0.394 0.606 35 H 0.074 0.926 36 H 0.071 0.929 37 H 0.413 0.587 38 H 0.405 0.595 39 H 0.077 0.923 40 H 0.403 0.597 41 H -0.278 1.278 42 H -0.289 1.289 43 H 0.132 0.868 44 H 0.085 0.915 45 H 0.069 0.931 46 H 0.095 0.905 47 H 0.172 0.828 48 H 0.094 0.906 49 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.409 6.332 1.976 8.559 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.314 3.686 5 O -0.429 6.429 6 C -0.119 4.119 7 H 0.164 0.836 8 C -0.174 4.174 9 C 0.073 3.927 10 O -0.345 6.345 11 C -0.016 4.016 12 N -0.365 5.365 13 C 0.349 3.651 14 O -0.437 6.437 15 C -0.180 4.180 16 C 0.118 3.882 17 O -0.300 6.300 18 C -0.126 4.126 19 C -0.191 4.191 20 O -0.372 6.372 21 Si 0.685 3.315 22 C -0.114 4.114 23 C -0.096 4.096 24 C -0.174 4.174 25 C -0.076 4.076 26 C -0.145 4.145 27 H 0.088 0.912 28 H 0.088 0.912 29 H 0.114 0.886 30 H 0.085 0.915 31 H 0.085 0.915 32 H 0.111 0.889 33 H 0.134 0.866 34 H 0.245 0.755 35 H 0.092 0.908 36 H 0.090 0.910 37 H 0.252 0.748 38 H 0.264 0.736 39 H 0.095 0.905 40 H 0.255 0.745 41 H -0.205 1.205 42 H -0.216 1.216 43 H 0.150 0.850 44 H 0.104 0.896 45 H 0.088 0.912 46 H 0.114 0.886 47 H 0.189 0.811 48 H 0.113 0.887 49 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -5.879 5.198 1.440 7.979 hybrid contribution 0.350 -0.222 -0.227 0.472 sum -5.529 4.977 1.213 7.537 Atomic orbital electron populations 1.21824 0.90580 1.04278 1.03798 1.23263 0.97019 0.79398 1.02427 1.86523 1.24234 1.33432 1.83377 1.24091 0.80557 0.92998 0.70980 1.90675 1.61186 1.44261 1.46808 1.22578 0.96838 0.89648 1.02812 0.83559 1.23707 0.98362 1.01181 0.94177 1.22072 0.93356 0.85505 0.91719 1.86583 1.95982 1.14764 1.37164 1.21875 0.99484 0.91381 0.88832 1.45563 1.32157 1.35048 1.23687 1.18169 0.82125 0.83583 0.81268 1.90831 1.30760 1.46180 1.75911 1.20420 1.00990 0.99999 0.96562 1.18480 0.89751 0.88585 0.91344 1.84640 1.19980 1.46960 1.78459 1.19971 0.98439 0.96010 0.98137 1.24850 0.90145 1.04631 0.99429 1.86395 1.27404 1.83215 1.40178 0.94003 0.80039 0.75733 0.81740 1.21251 0.94314 0.97844 0.97997 1.20132 0.98092 0.97604 0.93769 1.20932 0.94286 0.97378 1.04765 1.21454 0.94558 0.92010 0.99590 1.23057 0.93465 0.96833 1.01191 0.91153 0.91187 0.88594 0.91487 0.91485 0.88864 0.86628 0.75548 0.90769 0.91043 0.74843 0.73580 0.90468 0.74537 1.20471 1.21596 0.85043 0.89626 0.91164 0.88603 0.81098 0.88725 0.87906 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.50 10.29 71.98 0.74 1.24 16 2 C 0.05 0.08 6.19 71.98 0.45 0.52 16 3 O -0.36 -1.35 10.22 -51.39 -0.53 -1.88 16 4 C 0.47 2.23 7.49 71.24 0.53 2.76 16 5 O -0.54 -6.09 15.65 21.95 0.34 -5.75 16 6 C -0.10 0.18 4.20 -10.92 -0.05 0.13 16 7 H 0.15 -0.66 8.14 -2.39 -0.02 -0.68 16 8 C -0.14 0.77 7.04 31.22 0.22 0.99 16 9 C 0.12 -0.51 1.38 -10.27 -0.01 -0.53 16 10 O -0.54 3.02 13.41 -148.98 -2.00 1.02 16 11 C 0.11 -0.10 5.24 86.38 0.45 0.36 16 12 N -0.71 1.89 5.28 -466.29 -2.46 -0.57 16 13 C 0.56 3.38 7.76 86.70 0.67 4.06 16 14 O -0.56 -8.38 15.16 16.92 0.26 -8.12 16 15 C -0.18 -0.75 5.89 -20.01 -0.12 -0.87 16 16 C 0.17 1.32 6.69 22.84 0.15 1.47 16 17 O -0.49 -4.92 10.90 -68.85 -0.75 -5.67 16 18 C -0.12 -0.71 5.30 -19.80 -0.10 -0.81 16 19 C -0.08 -0.12 2.37 71.23 0.17 0.05 16 20 O -0.56 -0.26 12.86 -148.98 -1.92 -2.18 16 21 Si 0.78 -1.88 30.19 68.60 2.07 0.19 16 22 C -0.10 -0.28 8.30 22.30 0.19 -0.09 16 23 C -0.10 0.14 5.87 -19.90 -0.12 0.02 16 24 C -0.12 0.85 10.00 71.24 0.71 1.57 16 25 C -0.06 0.16 9.18 22.52 0.21 0.37 16 26 C -0.11 0.09 6.80 31.12 0.21 0.30 16 27 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 28 H 0.07 -0.24 8.14 -2.38 -0.02 -0.26 16 29 H 0.10 -0.59 8.14 -2.39 -0.02 -0.61 16 30 H 0.07 0.14 8.13 -2.38 -0.02 0.13 16 31 H 0.07 0.14 8.13 -2.38 -0.02 0.12 16 32 H 0.09 -0.36 8.02 -2.38 -0.02 -0.38 16 33 H 0.12 -1.17 8.14 -2.39 -0.02 -1.19 16 34 H 0.39 -5.14 7.72 -74.06 -0.57 -5.71 16 35 H 0.07 0.15 8.09 -2.39 -0.02 0.13 16 36 H 0.07 0.16 8.14 -2.39 -0.02 0.14 16 37 H 0.41 -4.34 5.45 -92.71 -0.50 -4.84 16 38 H 0.40 2.16 9.06 -74.06 -0.67 1.49 16 39 H 0.08 0.11 7.82 -2.38 -0.02 0.09 16 40 H 0.40 -3.89 8.74 -74.06 -0.65 -4.54 16 41 H -0.28 -0.59 6.74 99.48 0.67 0.08 16 42 H -0.29 -0.95 7.11 99.48 0.71 -0.25 16 43 H 0.13 0.21 4.87 -2.91 -0.01 0.20 16 44 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 45 H 0.07 -0.46 8.08 -2.39 -0.02 -0.48 16 46 H 0.10 -1.09 8.08 -2.38 -0.02 -1.11 16 47 H 0.17 -2.05 6.40 -2.91 -0.02 -2.07 16 48 H 0.09 -0.08 8.14 -2.38 -0.02 -0.10 16 49 H 0.10 0.18 7.40 -2.39 -0.02 0.16 16 Total: 0.00 -30.10 408.64 -2.03 -32.14 By element: Atomic # 1 Polarization: -19.36 SS G_CDS: -1.36 Total: -20.71 kcal Atomic # 6 Polarization: 7.24 SS G_CDS: 4.30 Total: 11.54 kcal Atomic # 7 Polarization: 1.89 SS G_CDS: -2.46 Total: -0.57 kcal Atomic # 8 Polarization: -17.99 SS G_CDS: -4.59 Total: -22.58 kcal Atomic # 14 Polarization: -1.88 SS G_CDS: 2.07 Total: 0.19 kcal Total: -30.10 -2.03 -32.14 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_13422088.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -157.601 kcal (2) G-P(sol) polarization free energy of solvation -30.104 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -187.705 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.033 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.138 kcal (6) G-S(sol) free energy of system = (1) + (5) -189.738 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds