Wall clock time and date at job start Sun Mar 7 2021 07:04:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45206 * 109.46885 * 2 1 4 4 C 1.34227 * 117.00171 * 179.97438 * 3 2 1 5 5 O 1.20829 * 119.99904 * 0.02562 * 4 3 2 6 6 C 1.50698 * 120.00181 * 180.02562 * 4 3 2 7 7 H 1.09005 * 112.84704 * 48.80846 * 6 4 3 8 8 C 1.53776 * 113.61653 * 180.02562 * 6 4 3 9 9 C 1.53781 * 87.08233 * 140.06877 * 8 6 4 10 10 O 1.42901 * 113.61697 * 89.20052 * 9 8 6 11 11 C 1.53006 * 113.61132 * 220.01888 * 9 8 6 12 12 N 1.46500 * 109.46998 * 179.97438 * 11 9 8 13 13 C 1.34769 * 120.00237 * 180.02562 * 12 11 9 14 14 O 1.21595 * 119.99869 * 359.97438 * 13 12 11 15 15 C 1.47526 * 120.00447 * 180.02562 * 13 12 11 16 16 C 1.39766 * 120.07038 * 179.72673 * 15 13 12 17 17 C 1.37634 * 119.93039 * 179.72100 * 16 15 13 18 18 C 1.50694 * 119.96680 * 180.27430 * 17 16 15 19 19 O 1.42902 * 109.47268 * 105.25514 * 18 17 16 20 20 Si 1.86297 * 109.47340 * 345.25096 * 18 17 16 21 21 C 1.39204 * 120.06558 * 0.52573 * 17 16 15 22 22 N 1.39049 * 119.92954 * 179.74356 * 21 17 16 23 23 C 1.46896 * 110.99936 * 120.02227 * 22 21 17 24 24 C 1.46891 * 111.00061 * 243.97805 * 22 21 17 25 25 C 1.39235 * 120.13801 * 359.76688 * 21 17 16 26 26 C 1.37595 * 120.07143 * 359.96096 * 25 21 17 27 27 C 1.53781 * 87.08050 * 334.56550 * 9 8 6 28 28 H 1.09000 * 109.47246 * 60.00440 * 1 2 3 29 29 H 1.09003 * 109.46808 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47156 * 299.99287 * 1 2 3 31 31 H 1.09000 * 109.47156 * 240.00713 * 2 1 3 32 32 H 1.08992 * 109.47422 * 120.00190 * 2 1 3 33 33 H 1.08999 * 113.61794 * 25.51784 * 8 6 4 34 34 H 1.09000 * 113.61218 * 254.61517 * 8 6 4 35 35 H 0.96698 * 113.99715 * 181.53156 * 10 9 8 36 36 H 1.08993 * 109.46955 * 300.00075 * 11 9 8 37 37 H 1.09000 * 109.47050 * 59.99904 * 11 9 8 38 38 H 0.97010 * 119.99909 * 359.97438 * 12 11 9 39 39 H 1.08003 * 120.03608 * 359.97438 * 16 15 13 40 40 H 1.09003 * 109.46915 * 225.25207 * 18 17 16 41 41 H 0.96702 * 113.99901 * 180.02562 * 19 18 17 42 42 H 1.48495 * 110.00280 * 298.68709 * 20 18 17 43 43 H 1.48506 * 109.99543 * 60.00158 * 20 18 17 44 44 H 1.09000 * 109.47148 * 60.00079 * 23 22 21 45 45 H 1.08993 * 109.47196 * 180.02562 * 23 22 21 46 46 H 1.09001 * 109.47450 * 300.00158 * 23 22 21 47 47 H 1.08997 * 109.47388 * 60.00318 * 24 22 21 48 48 H 1.09005 * 109.47045 * 180.02562 * 24 22 21 49 49 H 1.09004 * 109.47281 * 300.00325 * 24 22 21 50 50 H 1.07999 * 119.96714 * 179.97438 * 25 21 17 51 51 H 1.07998 * 120.03601 * 180.02562 * 26 25 21 52 52 H 1.08997 * 113.61112 * 139.98234 * 27 9 8 53 53 H 1.08993 * 113.61733 * 270.88471 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3446 1.5450 0.0005 5 8 4.0807 0.5868 0.0005 6 6 3.9206 2.9376 0.0012 7 1 3.4707 3.5813 0.7571 8 6 5.4580 2.9684 0.0011 9 6 5.3561 4.1447 -0.9841 10 8 5.2832 5.4213 -0.3460 11 6 6.3983 4.0987 -2.1035 12 7 6.2194 5.2549 -2.9851 13 6 7.0303 5.4236 -4.0482 14 8 7.9108 4.6164 -4.2754 15 6 6.8505 6.5882 -4.9357 16 6 7.6944 6.7676 -6.0354 17 6 7.5205 7.8521 -6.8648 18 6 8.4259 8.0429 -8.0542 19 8 7.7190 7.7068 -9.2498 20 14 9.9169 6.9391 -7.8832 21 6 6.5123 8.7756 -6.6031 22 7 6.3425 9.8731 -7.4399 23 6 5.0027 9.8735 -8.0423 24 6 6.5965 11.1281 -6.7202 25 6 5.6739 8.6030 -5.5050 26 6 5.8392 7.5179 -4.6752 27 6 3.9860 3.5799 -1.3946 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5137 0.8900 31 1 1.8933 -0.5137 -0.8900 32 1 1.8933 -0.5138 0.8899 33 1 5.9127 2.0762 -0.4296 34 1 5.8893 3.2416 0.9641 35 1 5.1954 6.1633 -0.9598 36 1 7.3981 4.1229 -1.6701 37 1 6.2737 3.1811 -2.6784 38 1 5.5167 5.8988 -2.8041 39 1 8.4795 6.0537 -6.2364 40 1 8.7477 9.0832 -8.1027 41 1 8.2421 7.8061 -10.0571 42 1 10.6781 7.2996 -6.6603 43 1 9.4915 5.5179 -7.8161 44 1 4.2503 9.9147 -7.2548 45 1 4.8969 10.7419 -8.6923 46 1 4.8670 8.9637 -8.6271 47 1 7.6194 11.1306 -6.3439 48 1 6.4562 11.9704 -7.3978 49 1 5.9018 11.2149 -5.8847 50 1 4.8929 9.3214 -5.3043 51 1 5.1883 7.3843 -3.8238 52 1 3.2289 4.3467 -1.5583 53 1 4.0381 2.8549 -2.2068 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_13422196.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:39 Heat of formation + Delta-G solvation = -125.479781 kcal Electronic energy + Delta-G solvation = -35113.937920 eV Core-core repulsion = 30339.992793 eV Total energy + Delta-G solvation = -4773.945127 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.192 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -42.25073 -41.76914 -40.84922 -40.09156 -37.82971 -37.74203 -37.30608 -36.16727 -35.55635 -33.11499 -32.71008 -31.63311 -29.69802 -28.52074 -27.12340 -26.93924 -26.77345 -25.54388 -23.85797 -23.30820 -22.87732 -22.01135 -21.36871 -20.83809 -19.54561 -18.81915 -18.33034 -18.00285 -17.91396 -17.78637 -17.43338 -17.26152 -16.72426 -16.68307 -16.23980 -16.12753 -15.94902 -15.78013 -15.34377 -15.15434 -14.97123 -14.83489 -14.66400 -14.57569 -14.26166 -14.14201 -13.88412 -13.83332 -13.66977 -13.57472 -13.35118 -13.31814 -13.06459 -13.01655 -12.82998 -12.76179 -12.62795 -12.60823 -12.34579 -12.20948 -12.06264 -11.83358 -11.61817 -11.55977 -11.31852 -10.99884 -10.51066 -10.28131 -10.19677 -9.90257 -9.52113 -5.06401 -0.52692 0.01045 0.99851 1.26616 1.46224 1.54710 1.55868 1.76481 1.93093 2.46767 2.74477 2.77377 3.03762 3.24514 3.34970 3.38257 3.38440 3.50588 3.58060 3.82200 3.86889 3.92142 3.96465 3.99640 4.08279 4.14776 4.15172 4.23328 4.27215 4.38456 4.39808 4.43085 4.52225 4.53807 4.59190 4.61148 4.62194 4.72702 4.75376 4.80409 4.83913 4.85404 4.90351 4.98213 5.00159 5.01858 5.02720 5.06320 5.09258 5.15356 5.37581 5.43220 5.86218 6.15485 6.23403 6.54181 6.59163 6.88795 6.95913 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.539 6.539 6 C -0.099 4.099 7 H 0.147 0.853 8 C -0.108 4.108 9 C 0.115 3.885 10 O -0.535 6.535 11 C 0.105 3.895 12 N -0.704 5.704 13 C 0.560 3.440 14 O -0.582 6.582 15 C -0.152 4.152 16 C -0.084 4.084 17 C -0.082 4.082 18 C -0.043 4.043 19 O -0.552 6.552 20 Si 0.750 3.250 21 C 0.144 3.856 22 N -0.519 5.519 23 C 0.032 3.968 24 C 0.024 3.976 25 C -0.153 4.153 26 C -0.053 4.053 27 C -0.137 4.137 28 H 0.069 0.931 29 H 0.096 0.904 30 H 0.069 0.931 31 H 0.067 0.933 32 H 0.067 0.933 33 H 0.103 0.897 34 H 0.095 0.905 35 H 0.392 0.608 36 H 0.071 0.929 37 H 0.077 0.923 38 H 0.415 0.585 39 H 0.110 0.890 40 H 0.095 0.905 41 H 0.400 0.600 42 H -0.296 1.296 43 H -0.305 1.305 44 H 0.043 0.957 45 H 0.087 0.913 46 H 0.059 0.941 47 H 0.066 0.934 48 H 0.089 0.911 49 H 0.043 0.957 50 H 0.161 0.839 51 H 0.171 0.829 52 H 0.115 0.885 53 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.079 8.322 -1.517 10.417 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.314 3.686 5 O -0.429 6.429 6 C -0.118 4.118 7 H 0.165 0.835 8 C -0.146 4.146 9 C 0.074 3.926 10 O -0.343 6.343 11 C -0.019 4.019 12 N -0.359 5.359 13 C 0.348 3.652 14 O -0.463 6.463 15 C -0.156 4.156 16 C -0.103 4.103 17 C -0.084 4.084 18 C -0.155 4.155 19 O -0.362 6.362 20 Si 0.659 3.341 21 C 0.049 3.951 22 N -0.240 5.240 23 C -0.114 4.114 24 C -0.122 4.122 25 C -0.172 4.172 26 C -0.072 4.072 27 C -0.174 4.174 28 H 0.088 0.912 29 H 0.114 0.886 30 H 0.088 0.912 31 H 0.085 0.915 32 H 0.085 0.915 33 H 0.121 0.879 34 H 0.113 0.887 35 H 0.244 0.756 36 H 0.089 0.911 37 H 0.095 0.905 38 H 0.254 0.746 39 H 0.127 0.873 40 H 0.113 0.887 41 H 0.251 0.749 42 H -0.224 1.224 43 H -0.234 1.234 44 H 0.061 0.939 45 H 0.106 0.894 46 H 0.078 0.922 47 H 0.085 0.915 48 H 0.108 0.892 49 H 0.062 0.938 50 H 0.178 0.822 51 H 0.189 0.811 52 H 0.134 0.866 53 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -4.965 6.372 -0.610 8.101 hybrid contribution -0.812 -0.030 0.566 0.990 sum -5.778 6.342 -0.044 8.579 Atomic orbital electron populations 1.21825 0.90565 1.04290 1.03803 1.23266 0.97032 0.79375 1.02432 1.86525 1.24208 1.33451 1.83367 1.24078 0.80572 0.92978 0.70988 1.90676 1.61188 1.44262 1.46806 1.22523 0.96796 0.89696 1.02809 0.83485 1.23069 0.93533 0.96793 1.01181 1.22081 0.93330 0.85572 0.91664 1.86599 1.95987 1.14698 1.37032 1.21943 1.00067 0.89261 0.90628 1.45530 1.35427 1.27959 1.26944 1.18393 0.80882 0.84980 0.80900 1.90810 1.35266 1.46617 1.73640 1.19797 1.00534 0.97470 0.97757 1.21042 0.98213 0.96358 0.94676 1.19474 0.97952 0.94321 0.96614 1.24316 0.99727 1.06296 0.85170 1.86430 1.43162 1.90717 1.15851 0.94924 0.78371 0.75697 0.85066 1.18971 0.92802 0.92047 0.91313 1.59344 1.30830 1.01203 1.32613 1.22454 0.86157 1.03560 0.99193 1.22566 1.01768 0.89948 0.97891 1.21974 1.00864 0.99387 0.95015 1.21495 0.94757 0.91631 0.99313 1.23674 0.98290 1.01187 0.94265 0.91159 0.88583 0.91169 0.91484 0.91474 0.87906 0.88677 0.75640 0.91113 0.90517 0.74550 0.87295 0.88736 0.74946 1.22376 1.23383 0.93875 0.89406 0.92181 0.91505 0.89236 0.93813 0.82177 0.81134 0.86639 0.88800 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.49 10.29 71.98 0.74 1.23 16 2 C 0.05 0.08 6.19 71.98 0.45 0.53 16 3 O -0.36 -1.38 10.22 -51.39 -0.53 -1.90 16 4 C 0.47 2.27 7.49 71.24 0.53 2.80 16 5 O -0.54 -6.15 15.65 21.95 0.34 -5.81 16 6 C -0.10 0.17 4.19 -11.01 -0.05 0.12 16 7 H 0.15 -0.67 8.14 -2.38 -0.02 -0.68 16 8 C -0.11 0.07 6.79 31.12 0.21 0.29 16 9 C 0.12 -0.48 1.48 -10.27 -0.02 -0.50 16 10 O -0.54 3.04 13.40 -148.98 -2.00 1.04 16 11 C 0.10 -0.03 5.32 86.38 0.46 0.43 16 12 N -0.70 1.43 5.30 -466.28 -2.47 -1.04 16 13 C 0.56 4.16 7.76 86.69 0.67 4.83 16 14 O -0.58 -10.40 16.34 -4.01 -0.07 -10.47 16 15 C -0.15 -0.76 5.88 -20.08 -0.12 -0.88 16 16 C -0.08 -0.81 8.19 22.50 0.18 -0.63 16 17 C -0.08 -0.50 5.31 -19.78 -0.10 -0.61 16 18 C -0.04 -0.11 2.32 71.23 0.17 0.06 16 19 O -0.55 -1.04 12.86 -148.98 -1.92 -2.95 16 20 Si 0.75 2.75 30.18 68.60 2.07 4.82 16 21 C 0.14 0.24 4.70 38.47 0.18 0.42 16 22 N -0.52 0.47 4.20 -745.14 -3.13 -2.66 16 23 C 0.03 -0.10 9.34 127.69 1.19 1.09 16 24 C 0.02 -0.12 9.38 127.69 1.20 1.08 16 25 C -0.15 0.48 8.53 22.36 0.19 0.67 16 26 C -0.05 0.20 9.53 22.50 0.21 0.41 16 27 C -0.14 0.74 7.02 31.12 0.22 0.96 16 28 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 29 H 0.10 -0.59 8.14 -2.39 -0.02 -0.61 16 30 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 31 H 0.07 0.14 8.13 -2.39 -0.02 0.12 16 32 H 0.07 0.15 8.13 -2.39 -0.02 0.13 16 33 H 0.10 0.20 7.40 -2.39 -0.02 0.18 16 34 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 35 H 0.39 -5.26 7.33 -74.06 -0.54 -5.80 16 36 H 0.07 0.23 8.14 -2.39 -0.02 0.21 16 37 H 0.08 0.17 7.94 -2.39 -0.02 0.15 16 38 H 0.41 -4.40 5.05 -92.70 -0.47 -4.87 16 39 H 0.11 1.62 4.46 -2.91 -0.01 1.60 16 40 H 0.09 -0.05 7.78 -2.39 -0.02 -0.07 16 41 H 0.40 -3.24 8.74 -74.06 -0.65 -3.88 16 42 H -0.30 -3.02 7.11 99.48 0.71 -2.32 16 43 H -0.30 -4.02 6.76 99.48 0.67 -3.35 16 44 H 0.04 -0.25 7.10 -2.39 -0.02 -0.27 16 45 H 0.09 -0.47 8.12 -2.39 -0.02 -0.49 16 46 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 47 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 48 H 0.09 -0.61 8.12 -2.38 -0.02 -0.63 16 49 H 0.04 -0.30 7.32 -2.38 -0.02 -0.32 16 50 H 0.16 -1.39 6.99 -2.91 -0.02 -1.41 16 51 H 0.17 -2.25 6.39 -2.91 -0.02 -2.27 16 52 H 0.12 -1.14 8.14 -2.39 -0.02 -1.15 16 53 H 0.09 -0.35 7.92 -2.39 -0.02 -0.37 16 Total: 0.00 -31.56 431.91 -2.06 -33.62 By element: Atomic # 1 Polarization: -26.27 SS G_CDS: -0.69 Total: -26.96 kcal Atomic # 6 Polarization: 5.99 SS G_CDS: 6.32 Total: 12.32 kcal Atomic # 7 Polarization: 1.90 SS G_CDS: -5.60 Total: -3.70 kcal Atomic # 8 Polarization: -15.93 SS G_CDS: -4.16 Total: -20.09 kcal Atomic # 14 Polarization: 2.75 SS G_CDS: 2.07 Total: 4.82 kcal Total: -31.56 -2.06 -33.62 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_13422196.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.861 kcal (2) G-P(sol) polarization free energy of solvation -31.560 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.421 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.059 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.619 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.480 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds