Wall clock time and date at job start Sun Mar 7 2021 07:04:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45197 * 109.47240 * 2 1 4 4 C 1.34234 * 117.00066 * 179.97438 * 3 2 1 5 5 O 1.20826 * 119.99491 * 359.97438 * 4 3 2 6 6 C 1.50696 * 119.99937 * 179.97438 * 4 3 2 7 7 H 1.08998 * 112.84845 * 48.81039 * 6 4 3 8 8 C 1.53779 * 113.61335 * 179.97438 * 6 4 3 9 9 C 1.53778 * 87.08171 * 140.06872 * 8 6 4 10 10 O 1.42902 * 113.61590 * 89.20164 * 9 8 6 11 11 C 1.53003 * 113.61828 * 220.01976 * 9 8 6 12 12 N 1.46495 * 109.47246 * 180.02562 * 11 9 8 13 13 C 1.34771 * 119.99902 * 180.02562 * 12 11 9 14 14 O 1.21655 * 120.00268 * 359.97438 * 13 12 11 15 15 C 1.47049 * 120.00321 * 179.97438 * 13 12 11 16 16 C 1.36224 * 123.49414 * 179.97438 * 15 13 12 17 17 Cl 1.73589 * 124.60712 * 0.03316 * 16 15 13 18 18 S 1.70453 * 110.78630 * 180.02562 * 16 15 13 19 19 C 1.75495 * 92.46674 * 0.02562 * 18 16 15 20 20 C 1.50693 * 124.68290 * 179.97438 * 19 18 16 21 21 O 1.42907 * 109.47661 * 120.02368 * 20 19 18 22 22 Si 1.86298 * 109.47618 * 0.02562 * 20 19 18 23 23 C 1.32695 * 110.63026 * 0.22385 * 19 18 16 24 24 C 1.53779 * 113.69438 * 277.53561 * 6 4 3 25 25 H 1.09002 * 109.47061 * 60.00218 * 1 2 3 26 26 H 1.08996 * 109.47504 * 180.02562 * 1 2 3 27 27 H 1.08996 * 109.47639 * 300.00502 * 1 2 3 28 28 H 1.08996 * 109.47134 * 239.99350 * 2 1 3 29 29 H 1.09007 * 109.46839 * 119.99337 * 2 1 3 30 30 H 1.09002 * 113.61282 * 25.51920 * 8 6 4 31 31 H 1.09004 * 113.61920 * 254.61939 * 8 6 4 32 32 H 0.96699 * 114.00386 * 181.53527 * 10 9 8 33 33 H 1.09007 * 109.46749 * 59.99750 * 11 9 8 34 34 H 1.08995 * 109.46692 * 300.00345 * 11 9 8 35 35 H 0.97000 * 120.00217 * 359.97438 * 12 11 9 36 36 H 1.09000 * 109.46936 * 240.01991 * 20 19 18 37 37 H 0.96697 * 114.00527 * 179.97438 * 21 20 19 38 38 H 1.48506 * 109.99834 * 298.68714 * 22 20 19 39 39 H 1.48502 * 110.00011 * 59.99978 * 22 20 19 40 40 H 1.07995 * 123.44883 * 179.75187 * 23 19 18 41 41 H 1.09001 * 113.61324 * 105.45913 * 24 6 4 42 42 H 1.08997 * 113.61361 * 334.56034 * 24 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0807 0.5865 0.0015 6 6 3.9207 2.9373 0.0000 7 1 3.4709 3.5817 0.7553 8 6 5.4582 2.9680 0.0013 9 6 5.3574 4.1431 -0.9854 10 8 5.2840 5.4204 -0.3489 11 6 6.4005 4.0957 -2.1038 12 7 6.2232 5.2516 -2.9862 13 6 7.0352 5.4190 -4.0487 14 8 7.9158 4.6106 -4.2747 15 6 6.8570 6.5789 -4.9348 16 6 7.6362 6.8177 -6.0264 17 17 8.9480 5.8045 -6.5421 18 16 7.1478 8.2465 -6.8173 19 6 5.8633 8.5393 -5.6579 20 6 4.9198 9.7135 -5.7018 21 8 3.5764 9.2410 -5.8213 22 14 5.3327 10.7876 -7.1669 23 6 5.8412 7.5869 -4.7342 24 6 3.9870 3.5781 -1.3964 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3634 0.5139 0.8899 28 1 1.8933 -0.5139 -0.8899 29 1 1.8933 -0.5138 0.8901 30 1 5.9131 2.0752 -0.4279 31 1 5.8887 3.2423 0.9645 32 1 5.1968 6.1618 -0.9636 33 1 6.2763 3.1774 -2.6777 34 1 7.3999 4.1204 -1.6696 35 1 5.5209 5.8960 -2.8063 36 1 5.0203 10.2948 -4.7853 37 1 2.9136 9.9442 -5.8550 38 1 6.7165 11.3112 -7.0389 39 1 5.1994 10.0066 -8.4229 40 1 5.1347 7.5659 -3.9177 41 1 3.2300 4.3449 -1.5612 42 1 4.0394 2.8523 -2.2078 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_13431040.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:50 Heat of formation + Delta-G solvation = -139.033616 kcal Electronic energy + Delta-G solvation = -29317.666486 eV Core-core repulsion = 24804.524843 eV Total energy + Delta-G solvation = -4513.141643 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.067 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.16662 -41.26004 -40.27591 -38.80682 -38.06404 -37.77449 -37.03410 -36.04381 -35.38954 -32.69061 -31.91045 -29.96680 -27.17537 -26.94096 -26.63502 -25.02077 -23.69271 -22.18793 -21.94031 -20.93077 -20.76356 -19.49135 -18.95682 -18.49874 -18.32935 -17.78530 -17.39108 -17.29364 -17.17391 -16.66066 -16.27847 -16.10837 -15.73921 -15.37143 -15.22301 -14.93091 -14.81895 -14.54897 -14.46801 -14.26984 -14.20982 -14.12525 -13.80887 -13.52980 -13.27645 -13.00569 -12.98618 -12.77116 -12.61082 -12.57754 -12.46721 -12.29710 -12.26347 -12.03156 -11.74997 -11.58843 -11.47921 -11.09991 -10.92735 -10.45884 -10.34810 -9.93038 -9.80837 -5.22636 -0.74323 -0.27292 0.36144 0.64114 0.91420 1.03485 1.20216 1.59056 1.59504 1.90225 1.95581 2.06255 2.83587 3.09510 3.17464 3.35276 3.42353 3.46826 3.62282 3.77783 3.88867 3.92201 3.94641 4.02224 4.20248 4.29213 4.29747 4.31284 4.47307 4.57556 4.63845 4.67137 4.70581 4.79290 4.85619 4.87457 4.89293 4.90101 5.09624 5.12111 5.15139 5.40637 6.25386 6.61214 6.62687 6.90804 7.00123 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.100 4.100 7 H 0.147 0.853 8 C -0.108 4.108 9 C 0.116 3.884 10 O -0.536 6.536 11 C 0.108 3.892 12 N -0.704 5.704 13 C 0.575 3.425 14 O -0.556 6.556 15 C -0.162 4.162 16 C -0.134 4.134 17 Cl 0.004 6.996 18 S 0.195 5.805 19 C -0.189 4.189 20 C -0.029 4.029 21 O -0.556 6.556 22 Si 0.742 3.258 23 C -0.061 4.061 24 C -0.137 4.137 25 H 0.069 0.931 26 H 0.095 0.905 27 H 0.069 0.931 28 H 0.067 0.933 29 H 0.067 0.933 30 H 0.103 0.897 31 H 0.094 0.906 32 H 0.393 0.607 33 H 0.076 0.924 34 H 0.071 0.929 35 H 0.414 0.586 36 H 0.126 0.874 37 H 0.410 0.590 38 H -0.267 1.267 39 H -0.281 1.281 40 H 0.196 0.804 41 H 0.114 0.886 42 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.141 9.517 1.275 13.258 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.314 3.686 5 O -0.430 6.430 6 C -0.119 4.119 7 H 0.164 0.836 8 C -0.146 4.146 9 C 0.074 3.926 10 O -0.344 6.344 11 C -0.016 4.016 12 N -0.359 5.359 13 C 0.361 3.639 14 O -0.435 6.435 15 C -0.182 4.182 16 C -0.280 4.280 17 Cl 0.033 6.967 18 S 0.460 5.540 19 C -0.306 4.306 20 C -0.143 4.143 21 O -0.367 6.367 22 Si 0.646 3.354 23 C -0.089 4.089 24 C -0.174 4.174 25 H 0.089 0.911 26 H 0.114 0.886 27 H 0.088 0.912 28 H 0.085 0.915 29 H 0.085 0.915 30 H 0.121 0.879 31 H 0.113 0.887 32 H 0.244 0.756 33 H 0.095 0.905 34 H 0.090 0.910 35 H 0.252 0.748 36 H 0.143 0.857 37 H 0.262 0.738 38 H -0.193 1.193 39 H -0.207 1.207 40 H 0.213 0.787 41 H 0.132 0.868 42 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -6.840 8.486 -0.346 10.905 hybrid contribution -0.046 -1.314 0.836 1.559 sum -6.886 7.172 0.490 9.954 Atomic orbital electron populations 1.21822 0.90592 1.04258 1.03813 1.23258 0.97015 0.79419 1.02407 1.86527 1.24248 1.33403 1.83378 1.24100 0.80549 0.93010 0.70960 1.90673 1.61194 1.44262 1.46828 1.22529 0.96862 0.89636 1.02839 0.83555 1.23067 0.93435 0.96874 1.01182 1.22077 0.93307 0.85489 0.91704 1.86590 1.95992 1.14719 1.37090 1.21900 0.99951 0.89224 0.90480 1.45467 1.35453 1.27956 1.27009 1.17561 0.81379 0.84266 0.80732 1.90882 1.34254 1.45429 1.72984 1.20377 1.00239 0.99707 0.97841 1.25797 0.98757 1.01314 1.02107 1.98421 1.43407 1.65852 1.89043 1.83606 1.27024 1.15111 1.28297 1.23768 1.03128 1.03986 0.99710 1.23950 0.84002 0.95043 1.11284 1.86448 1.14192 1.38889 1.97140 0.93903 0.82924 0.82945 0.75604 1.21235 0.96632 0.90409 1.00620 1.23676 0.98423 1.01154 0.94167 0.91147 0.88626 0.91170 0.91502 0.91500 0.87913 0.88729 0.75595 0.90537 0.91019 0.74758 0.85655 0.73778 1.19292 1.20716 0.78718 0.86768 0.88852 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.50 10.29 71.98 0.74 1.24 16 2 C 0.05 0.08 6.19 71.98 0.45 0.53 16 3 O -0.36 -1.35 10.22 -51.46 -0.53 -1.88 16 4 C 0.47 2.21 7.49 71.23 0.53 2.75 16 5 O -0.54 -6.07 15.65 21.96 0.34 -5.73 16 6 C -0.10 0.18 4.19 -11.02 -0.05 0.14 16 7 H 0.15 -0.67 8.14 -2.39 -0.02 -0.69 16 8 C -0.11 0.11 6.80 31.12 0.21 0.32 16 9 C 0.12 -0.53 1.48 -10.25 -0.02 -0.55 16 10 O -0.54 3.20 13.40 -148.98 -2.00 1.21 16 11 C 0.11 -0.13 5.32 86.38 0.46 0.33 16 12 N -0.70 1.98 5.33 -466.74 -2.49 -0.51 16 13 C 0.57 3.29 7.79 86.55 0.67 3.97 16 14 O -0.56 -8.00 14.91 -4.21 -0.06 -8.06 16 15 C -0.16 -0.61 5.98 -19.84 -0.12 -0.73 16 16 C -0.13 -0.94 6.87 67.35 0.46 -0.47 16 17 Cl 0.00 0.04 27.20 -2.72 -0.07 -0.03 16 18 S 0.20 0.62 20.17 -56.49 -1.14 -0.52 16 19 C -0.19 0.38 5.71 24.51 0.14 0.52 16 20 C -0.03 0.25 2.94 71.23 0.21 0.46 16 21 O -0.56 4.98 12.83 -148.98 -1.91 3.07 16 22 Si 0.74 -5.19 30.91 68.60 2.12 -3.07 16 23 C -0.06 0.20 9.71 22.70 0.22 0.42 16 24 C -0.14 0.75 7.02 31.13 0.22 0.97 16 25 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 26 H 0.10 -0.59 8.14 -2.39 -0.02 -0.61 16 27 H 0.07 -0.25 8.14 -2.39 -0.02 -0.26 16 28 H 0.07 0.14 8.13 -2.39 -0.02 0.12 16 29 H 0.07 0.14 8.13 -2.38 -0.02 0.12 16 30 H 0.10 0.16 7.40 -2.39 -0.02 0.15 16 31 H 0.09 -0.10 8.14 -2.39 -0.02 -0.12 16 32 H 0.39 -5.32 7.33 -74.06 -0.54 -5.86 16 33 H 0.08 0.10 7.95 -2.38 -0.02 0.08 16 34 H 0.07 0.15 8.14 -2.39 -0.02 0.13 16 35 H 0.41 -4.39 5.57 -92.71 -0.52 -4.90 16 36 H 0.13 -1.85 7.96 -2.39 -0.02 -1.86 16 37 H 0.41 -7.78 8.74 -74.06 -0.65 -8.43 16 38 H -0.27 0.44 7.11 99.48 0.71 1.15 16 39 H -0.28 -0.32 7.11 99.48 0.71 0.39 16 40 H 0.20 -2.27 7.10 -2.91 -0.02 -2.29 16 41 H 0.11 -1.09 8.14 -2.39 -0.02 -1.11 16 42 H 0.09 -0.35 7.92 -2.39 -0.02 -0.37 16 Total: 0.00 -28.12 385.83 -2.16 -30.28 By element: Atomic # 1 Polarization: -24.09 SS G_CDS: -0.56 Total: -24.65 kcal Atomic # 6 Polarization: 5.76 SS G_CDS: 4.14 Total: 9.90 kcal Atomic # 7 Polarization: 1.98 SS G_CDS: -2.49 Total: -0.51 kcal Atomic # 8 Polarization: -7.24 SS G_CDS: -4.15 Total: -11.40 kcal Atomic # 14 Polarization: -5.19 SS G_CDS: 2.12 Total: -3.07 kcal Atomic # 16 Polarization: 0.62 SS G_CDS: -1.14 Total: -0.52 kcal Atomic # 17 Polarization: 0.04 SS G_CDS: -0.07 Total: -0.03 kcal Total: -28.12 -2.16 -30.28 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_13431040.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.755 kcal (2) G-P(sol) polarization free energy of solvation -28.119 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -136.874 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.160 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.279 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.034 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds