Wall clock time and date at job start Sun Mar 7 2021 07:04:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45206 * 109.46777 * 2 1 4 4 C 1.34224 * 117.00077 * 179.97438 * 3 2 1 5 5 O 1.20833 * 120.00103 * 359.97438 * 4 3 2 6 6 C 1.50696 * 120.00302 * 180.02562 * 4 3 2 7 7 H 1.09004 * 112.85403 * 50.32645 * 6 4 3 8 8 C 1.53777 * 113.61736 * 181.52975 * 6 4 3 9 9 C 1.53781 * 87.08386 * 139.97799 * 8 6 4 10 10 O 1.42901 * 113.61503 * 89.11530 * 9 8 6 11 11 C 1.52999 * 113.61326 * 219.93499 * 9 8 6 12 12 N 1.46496 * 109.47146 * 179.97438 * 11 9 8 13 13 C 1.34781 * 120.00303 * 180.02562 * 12 11 9 14 14 O 1.21612 * 119.99779 * 359.97438 * 13 12 11 15 15 C 1.47380 * 119.99879 * 180.02562 * 13 12 11 16 16 C 1.36413 * 127.19569 * 359.68287 * 15 13 12 17 17 O 1.33657 * 108.39666 * 179.83779 * 16 15 13 18 18 C 1.34213 * 110.90670 * 0.44573 * 17 16 15 19 19 C 1.50702 * 125.43515 * 179.72374 * 18 17 16 20 20 O 1.42904 * 109.46830 * 120.00147 * 19 18 17 21 21 Si 1.86295 * 109.47313 * 0.02562 * 19 18 17 22 22 C 1.34181 * 109.12506 * 359.72698 * 18 17 16 23 23 C 1.53790 * 113.61063 * 279.13608 * 6 4 3 24 24 H 1.09002 * 109.46716 * 180.02562 * 1 2 3 25 25 H 1.09000 * 109.47486 * 299.99948 * 1 2 3 26 26 H 1.09001 * 109.47362 * 60.00671 * 1 2 3 27 27 H 1.09000 * 109.47486 * 240.00051 * 2 1 3 28 28 H 1.09001 * 109.47362 * 119.99329 * 2 1 3 29 29 H 1.09002 * 113.61542 * 254.52757 * 8 6 4 30 30 H 1.08998 * 113.61567 * 25.42850 * 8 6 4 31 31 H 0.96701 * 113.99964 * 180.02562 * 10 9 8 32 32 H 1.08996 * 109.47509 * 299.99583 * 11 9 8 33 33 H 1.09006 * 109.47553 * 59.99862 * 11 9 8 34 34 H 0.97001 * 120.00450 * 359.97438 * 12 11 9 35 35 H 1.08002 * 125.79768 * 359.97438 * 16 15 13 36 36 H 1.08990 * 109.47299 * 240.00300 * 19 18 17 37 37 H 0.96701 * 114.00270 * 300.00535 * 20 19 18 38 38 H 1.48506 * 110.00153 * 58.67777 * 21 19 18 39 39 H 1.48496 * 110.00110 * 179.97438 * 21 19 18 40 40 H 1.07996 * 127.01778 * 179.97438 * 22 18 17 41 41 H 1.08995 * 113.61221 * 334.55991 * 23 6 4 42 42 H 1.08992 * 113.61243 * 105.47010 * 23 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5450 0.0005 5 8 4.0807 0.5868 0.0015 6 6 3.9205 2.9376 0.0012 7 1 3.4895 3.5736 0.7743 8 6 5.4575 2.9685 -0.0359 9 6 5.3319 4.1532 -1.0084 10 8 5.2727 5.4241 -0.3578 11 6 6.3480 4.1178 -2.1518 12 7 6.1478 5.2813 -3.0191 13 6 6.9339 5.4600 -4.0993 14 8 7.8097 4.6555 -4.3536 15 6 6.7327 6.6309 -4.9714 16 6 5.7989 7.6149 -4.8285 17 8 5.9541 8.4917 -5.8253 18 6 6.9563 8.1210 -6.6375 19 6 7.4073 8.8684 -7.8660 20 8 8.7759 9.2510 -7.7151 21 14 6.3579 10.3918 -8.0862 22 6 7.4926 6.9789 -6.1810 23 6 3.9497 3.5927 -1.3899 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3634 0.5138 0.8900 26 1 -0.3634 0.5137 -0.8900 27 1 1.8934 -0.5138 -0.8900 28 1 1.8934 -0.5137 0.8900 29 1 5.9121 3.2336 0.9187 30 1 5.9015 2.0801 -0.4850 31 1 5.1932 6.1731 -0.9643 32 1 7.3576 4.1395 -1.7416 33 1 6.2109 3.2050 -2.7316 34 1 5.4490 5.9229 -2.8165 35 1 5.0612 7.6764 -4.0421 36 1 7.3038 8.2261 -8.7404 37 1 8.9424 9.8248 -6.9548 38 1 6.4658 11.2608 -6.8868 39 1 6.7930 11.1380 -9.2941 40 1 8.3142 6.4277 -6.6140 41 1 3.9807 2.8752 -2.2098 42 1 3.1887 4.3608 -1.5268 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_13456056.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:55 Heat of formation + Delta-G solvation = -149.535408 kcal Electronic energy + Delta-G solvation = -27193.000596 eV Core-core repulsion = 22915.132674 eV Total energy + Delta-G solvation = -4277.867922 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.134 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -43.80486 -42.13748 -40.90233 -39.93538 -38.21397 -37.66300 -36.11685 -35.46053 -34.01786 -32.73483 -32.03741 -29.76433 -27.20624 -26.92042 -26.36036 -24.59253 -23.68554 -22.36662 -21.95209 -21.20771 -20.89937 -19.70600 -18.81728 -18.24926 -17.79839 -17.70790 -17.63388 -17.43321 -17.30838 -16.82559 -16.50239 -16.17354 -16.12275 -15.83261 -15.23340 -15.01803 -14.74122 -14.43973 -14.26286 -14.19756 -13.99842 -13.95038 -13.66563 -13.65685 -13.32723 -13.00702 -13.00076 -12.84287 -12.64427 -12.39961 -12.13376 -11.82762 -11.53981 -11.47690 -11.19330 -11.05326 -10.98618 -10.82566 -10.34255 -9.89253 -5.05168 0.13189 0.80937 1.07637 1.14501 1.40555 1.59679 1.64427 1.82799 1.88310 2.24305 2.61850 2.97022 3.06194 3.19709 3.27904 3.32841 3.34747 3.48356 3.80366 3.83816 3.92467 3.97864 4.04828 4.21085 4.23436 4.26770 4.30412 4.42676 4.45650 4.50915 4.59313 4.66687 4.70126 4.71058 4.77265 4.78879 4.96405 4.99242 5.07677 5.16614 5.44782 5.73762 6.15285 6.17965 6.26041 6.73145 7.05007 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.470 3.530 5 O -0.504 6.504 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.100 4.100 9 C 0.097 3.903 10 O -0.529 6.529 11 C 0.105 3.895 12 N -0.730 5.730 13 C 0.590 3.410 14 O -0.524 6.524 15 C -0.238 4.238 16 C 0.032 3.968 17 O -0.164 6.164 18 C -0.055 4.055 19 C -0.036 4.036 20 O -0.519 6.519 21 Si 0.705 3.295 22 C -0.123 4.123 23 C -0.145 4.145 24 H 0.081 0.919 25 H 0.067 0.933 26 H 0.067 0.933 27 H 0.071 0.929 28 H 0.071 0.929 29 H 0.095 0.905 30 H 0.115 0.885 31 H 0.376 0.624 32 H 0.085 0.915 33 H 0.086 0.914 34 H 0.394 0.606 35 H 0.213 0.787 36 H 0.138 0.862 37 H 0.381 0.619 38 H -0.256 1.256 39 H -0.249 1.249 40 H 0.163 0.837 41 H 0.099 0.901 42 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.882 3.300 0.182 7.634 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.392 6.392 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.138 4.138 9 C 0.055 3.945 10 O -0.335 6.335 11 C -0.018 4.018 12 N -0.384 5.384 13 C 0.378 3.622 14 O -0.400 6.400 15 C -0.242 4.242 16 C -0.039 4.039 17 O -0.060 6.060 18 C -0.103 4.103 19 C -0.145 4.145 20 O -0.326 6.326 21 Si 0.604 3.396 22 C -0.143 4.143 23 C -0.183 4.183 24 H 0.100 0.900 25 H 0.086 0.914 26 H 0.086 0.914 27 H 0.089 0.911 28 H 0.089 0.911 29 H 0.113 0.887 30 H 0.133 0.867 31 H 0.225 0.775 32 H 0.103 0.897 33 H 0.104 0.896 34 H 0.228 0.772 35 H 0.230 0.770 36 H 0.156 0.844 37 H 0.229 0.771 38 H -0.180 1.180 39 H -0.173 1.173 40 H 0.180 0.820 41 H 0.117 0.883 42 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -6.088 2.777 -0.102 6.693 hybrid contribution 0.581 0.281 0.547 0.845 sum -5.508 3.058 0.444 6.316 Atomic orbital electron populations 1.21822 0.92305 1.03288 1.03650 1.23098 0.95634 0.79835 1.02785 1.86515 1.24348 1.32771 1.83667 1.23518 0.80718 0.92293 0.72189 1.90694 1.60509 1.42915 1.45044 1.22414 0.97249 0.90994 1.01455 0.84985 1.23057 0.93340 0.96460 1.00946 1.22433 0.93798 0.85614 0.92629 1.86620 1.96184 1.14392 1.36278 1.21961 1.00192 0.89306 0.90377 1.45701 1.37190 1.27747 1.27805 1.17230 0.81047 0.84276 0.79631 1.90848 1.32530 1.44881 1.71790 1.21477 1.02460 0.99282 1.01020 1.24442 0.99395 0.88480 0.91540 1.83694 1.45267 1.45355 1.31699 1.22699 0.92529 0.98384 0.96705 1.24397 0.88587 1.08015 0.93529 1.86686 1.23073 1.70197 1.52645 0.94462 0.87811 0.75998 0.81321 1.22546 1.01201 0.95877 0.94634 1.23710 0.98142 1.00938 0.95482 0.89984 0.91351 0.91377 0.91090 0.91051 0.88673 0.86684 0.77543 0.89712 0.89554 0.77182 0.77020 0.84437 0.77070 1.18038 1.17321 0.81969 0.88290 0.89017 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.28 10.29 37.16 0.38 0.66 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.48 10.22 -39.24 -0.40 -0.88 16 4 C 0.47 0.75 7.48 36.00 0.27 1.02 16 5 O -0.50 -2.24 15.66 -18.76 -0.29 -2.54 16 6 C -0.10 0.13 4.19 -90.96 -0.38 -0.25 16 7 H 0.13 -0.27 8.14 -51.93 -0.42 -0.70 16 8 C -0.10 0.12 6.79 -25.92 -0.18 -0.05 16 9 C 0.10 -0.26 1.49 -89.71 -0.13 -0.39 16 10 O -0.53 1.44 13.41 -35.23 -0.47 0.97 16 11 C 0.11 -0.16 5.33 -4.04 -0.02 -0.18 16 12 N -0.73 1.75 5.33 -61.40 -0.33 1.43 16 13 C 0.59 0.89 7.81 -12.54 -0.10 0.79 16 14 O -0.52 -3.24 16.98 5.27 0.09 -3.15 16 15 C -0.24 -0.02 6.31 -103.28 -0.65 -0.68 16 16 C 0.03 -0.10 11.61 30.07 0.35 0.25 16 17 O -0.16 0.24 8.89 7.65 0.07 0.30 16 18 C -0.05 0.02 6.20 -35.74 -0.22 -0.20 16 19 C -0.04 0.05 2.98 36.01 0.11 0.16 16 20 O -0.52 -0.07 12.86 -35.23 -0.45 -0.52 16 21 Si 0.71 -1.42 32.08 -169.99 -5.45 -6.87 16 22 C -0.12 -0.15 10.88 -37.45 -0.41 -0.55 16 23 C -0.14 0.43 7.03 -25.82 -0.18 0.25 16 24 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 25 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 26 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 27 H 0.07 0.01 8.13 -51.93 -0.42 -0.42 16 28 H 0.07 0.02 8.13 -51.93 -0.42 -0.41 16 29 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 30 H 0.11 -0.07 7.41 -51.93 -0.38 -0.45 16 31 H 0.38 -2.39 7.30 45.56 0.33 -2.06 16 32 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 33 H 0.09 -0.06 7.96 -51.93 -0.41 -0.47 16 34 H 0.39 -2.41 6.00 -40.82 -0.25 -2.66 16 35 H 0.21 -1.71 7.47 -52.49 -0.39 -2.10 16 36 H 0.14 -0.36 7.96 -51.93 -0.41 -0.77 16 37 H 0.38 -1.04 8.70 45.56 0.40 -0.64 16 38 H -0.26 -0.12 7.11 56.52 0.40 0.28 16 39 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 40 H 0.16 0.30 8.06 -52.49 -0.42 -0.12 16 41 H 0.10 -0.26 7.93 -51.93 -0.41 -0.67 16 42 H 0.09 -0.40 8.14 -51.93 -0.42 -0.82 16 LS Contribution 366.27 15.07 5.52 5.52 Total: 0.00 -11.60 366.27 -7.61 -19.22 By element: Atomic # 1 Polarization: -9.57 SS G_CDS: -4.96 Total: -14.53 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: -0.93 Total: 1.06 kcal Atomic # 7 Polarization: 1.75 SS G_CDS: -0.33 Total: 1.43 kcal Atomic # 8 Polarization: -4.36 SS G_CDS: -1.46 Total: -5.82 kcal Atomic # 14 Polarization: -1.42 SS G_CDS: -5.45 Total: -6.87 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -11.60 -7.61 -19.22 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_13456056.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -130.319 kcal (2) G-P(sol) polarization free energy of solvation -11.602 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.921 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.614 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.217 kcal (6) G-S(sol) free energy of system = (1) + (5) -149.535 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds