Wall clock time and date at job start Sun Mar 7 2021 07:04:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45199 * 109.47075 * 2 1 4 4 C 1.34230 * 116.99614 * 179.97438 * 3 2 1 5 5 O 1.20824 * 120.00179 * 0.02562 * 4 3 2 6 6 C 1.50706 * 119.99717 * 179.97438 * 4 3 2 7 7 H 1.08999 * 112.85047 * 311.20094 * 6 4 3 8 8 C 1.53784 * 113.61115 * 82.50661 * 6 4 3 9 9 C 1.53782 * 87.08188 * 139.98102 * 8 6 4 10 10 O 1.42899 * 113.61514 * 89.11114 * 9 8 6 11 11 C 1.53000 * 113.61464 * 220.01870 * 9 8 6 12 12 N 1.46491 * 109.47045 * 282.49635 * 11 9 8 13 13 C 1.34786 * 120.00070 * 180.02562 * 12 11 9 14 14 O 1.21690 * 119.99680 * 359.97438 * 13 12 11 15 15 C 1.46673 * 120.00032 * 180.02562 * 13 12 11 16 16 C 1.37874 * 126.23145 * 179.97438 * 15 13 12 17 17 C 1.50702 * 126.45703 * 359.93034 * 16 15 13 18 18 C 1.39835 * 107.08160 * 179.97438 * 16 15 13 19 19 C 1.35453 * 107.86845 * 0.02562 * 18 16 15 20 20 C 1.50699 * 125.56081 * 180.02562 * 19 18 16 21 21 O 1.42897 * 109.47582 * 64.99946 * 20 19 18 22 22 Si 1.86299 * 109.46781 * 184.99877 * 20 19 18 23 23 N 1.35531 * 108.87023 * 359.76494 * 19 18 16 24 24 C 1.53781 * 113.61278 * 179.97438 * 6 4 3 25 25 H 1.08996 * 109.47853 * 180.02562 * 1 2 3 26 26 H 1.09002 * 109.47153 * 300.00058 * 1 2 3 27 27 H 1.08998 * 109.47533 * 59.99688 * 1 2 3 28 28 H 1.09002 * 109.47153 * 239.99942 * 2 1 3 29 29 H 1.09001 * 109.46832 * 120.00132 * 2 1 3 30 30 H 1.09000 * 113.61297 * 254.52804 * 8 6 4 31 31 H 1.09003 * 113.61710 * 25.43289 * 8 6 4 32 32 H 0.96703 * 113.99519 * 82.50415 * 10 9 8 33 33 H 1.09004 * 109.47139 * 42.49651 * 11 9 8 34 34 H 1.09000 * 109.46724 * 162.49084 * 11 9 8 35 35 H 0.96998 * 120.00581 * 359.97438 * 12 11 9 36 36 H 1.08997 * 109.47211 * 89.99786 * 17 16 15 37 37 H 1.09002 * 109.46609 * 209.99821 * 17 16 15 38 38 H 1.08999 * 109.47085 * 329.99428 * 17 16 15 39 39 H 1.08008 * 126.06302 * 179.97438 * 18 16 15 40 40 H 1.09000 * 109.47465 * 304.99555 * 20 19 18 41 41 H 0.96691 * 114.00204 * 179.97438 * 21 20 19 42 42 H 1.48503 * 110.00084 * 300.00037 * 22 20 19 43 43 H 1.48499 * 110.00367 * 61.31667 * 22 20 19 44 44 H 0.97000 * 125.67761 * 180.27023 * 23 19 18 45 45 H 1.08999 * 113.61835 * 334.57399 * 24 6 4 46 46 H 1.09005 * 113.61003 * 105.47345 * 24 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5447 0.0005 5 8 4.0807 0.5865 0.0005 6 6 3.9207 2.9374 0.0000 7 1 3.4715 3.5810 -0.7564 8 6 3.9857 3.5776 1.3967 9 6 5.3561 4.1430 0.9876 10 8 5.2815 5.4202 0.3512 11 6 6.3977 4.0953 2.1072 12 7 6.1448 5.1823 3.0562 13 6 6.9429 5.3379 4.1311 14 8 7.8733 4.5750 4.3136 15 6 6.6893 6.4259 5.0815 16 6 7.4195 6.7020 6.2179 17 6 8.6232 5.9436 6.7152 18 6 6.8322 7.8176 6.8226 19 6 5.7765 8.1949 6.0623 20 6 4.8608 9.3569 6.3489 21 8 5.5985 10.5776 6.2618 22 14 3.4759 9.3781 5.1030 23 7 5.6818 7.3602 4.9987 24 6 5.4582 2.9680 0.0013 25 1 -0.3635 -1.0276 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 -0.3634 0.5139 -0.8899 28 1 1.8933 -0.5138 -0.8900 29 1 1.8933 -0.5139 0.8900 30 1 3.2286 4.3443 1.5612 31 1 4.0375 2.8515 2.2080 32 1 5.2171 6.1632 0.9668 33 1 6.3313 3.1383 2.6249 34 1 7.3945 4.2094 1.6812 35 1 5.4034 5.7905 2.9106 36 1 9.5277 6.3786 6.2901 37 1 8.6670 6.0044 7.8026 38 1 8.5452 4.8994 6.4125 39 1 7.1613 8.2936 7.7346 40 1 4.4458 9.2539 7.3515 41 1 5.0709 11.3692 6.4347 42 1 4.0284 9.5181 3.7317 43 1 2.6816 8.1275 5.2051 44 1 5.0144 7.4118 4.2967 45 1 5.9124 2.0752 0.4312 46 1 5.8903 3.2424 -0.9611 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_13940406.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:59 Heat of formation + Delta-G solvation = -124.779808 kcal Electronic energy + Delta-G solvation = -29624.430854 eV Core-core repulsion = 25289.817459 eV Total energy + Delta-G solvation = -4334.613395 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.161 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.68955 -42.13498 -40.81587 -39.83492 -37.82444 -37.68644 -36.14410 -35.61902 -33.66129 -32.76015 -31.82795 -29.81280 -28.33571 -27.31018 -27.03092 -25.84710 -23.88221 -22.50931 -22.02318 -21.57952 -20.93233 -20.61017 -19.85305 -18.80531 -18.65572 -17.92118 -17.74661 -17.45529 -17.11115 -16.85858 -16.45845 -16.28830 -16.00640 -15.52953 -15.19885 -15.12726 -15.00226 -14.85126 -14.51372 -14.36047 -14.19886 -14.02195 -13.88932 -13.68378 -13.58221 -13.43550 -13.33514 -13.03163 -13.01099 -12.87269 -12.67000 -12.52685 -12.43283 -12.23741 -11.85856 -11.56368 -11.50937 -11.11877 -11.03927 -10.59357 -10.41799 -9.83360 -9.20645 -5.40448 0.25491 0.89065 1.11234 1.25301 1.51540 1.54664 1.57027 1.75594 1.82936 2.28064 2.58075 2.94201 3.18177 3.20580 3.26049 3.30795 3.63836 3.66532 3.79966 3.90164 3.95454 4.00639 4.07430 4.19245 4.22250 4.24530 4.27005 4.38344 4.39898 4.56924 4.63027 4.67533 4.73659 4.74730 4.76001 4.88304 4.92618 4.96885 5.00173 5.05072 5.20948 5.42015 5.43126 5.61281 5.87084 6.05852 6.16377 6.23657 6.42186 6.70305 6.99581 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.470 3.530 5 O -0.503 6.503 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.147 4.147 9 C 0.095 3.905 10 O -0.529 6.529 11 C 0.105 3.895 12 N -0.737 5.737 13 C 0.594 3.406 14 O -0.513 6.513 15 C -0.056 4.056 16 C -0.063 4.063 17 C -0.093 4.093 18 C -0.167 4.167 19 C 0.060 3.940 20 C -0.046 4.046 21 O -0.541 6.541 22 Si 0.682 3.318 23 N -0.542 5.542 24 C -0.099 4.099 25 H 0.082 0.918 26 H 0.067 0.933 27 H 0.068 0.932 28 H 0.072 0.928 29 H 0.071 0.929 30 H 0.089 0.911 31 H 0.099 0.901 32 H 0.376 0.624 33 H 0.088 0.912 34 H 0.087 0.913 35 H 0.388 0.612 36 H 0.071 0.929 37 H 0.066 0.934 38 H 0.081 0.919 39 H 0.150 0.850 40 H 0.090 0.910 41 H 0.386 0.614 42 H -0.249 1.249 43 H -0.250 1.250 44 H 0.406 0.594 45 H 0.116 0.884 46 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.217 4.961 1.539 8.892 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.391 6.391 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.184 4.184 9 C 0.053 3.947 10 O -0.334 6.334 11 C -0.018 4.018 12 N -0.391 5.391 13 C 0.382 3.618 14 O -0.388 6.388 15 C -0.168 4.168 16 C -0.072 4.072 17 C -0.150 4.150 18 C -0.192 4.192 19 C -0.055 4.055 20 C -0.158 4.158 21 O -0.347 6.347 22 Si 0.582 3.418 23 N -0.143 5.143 24 C -0.136 4.136 25 H 0.101 0.899 26 H 0.086 0.914 27 H 0.087 0.913 28 H 0.090 0.910 29 H 0.089 0.911 30 H 0.107 0.893 31 H 0.118 0.882 32 H 0.224 0.776 33 H 0.106 0.894 34 H 0.105 0.895 35 H 0.221 0.779 36 H 0.089 0.911 37 H 0.085 0.915 38 H 0.100 0.900 39 H 0.167 0.833 40 H 0.108 0.892 41 H 0.235 0.765 42 H -0.173 1.173 43 H -0.174 1.174 44 H 0.244 0.756 45 H 0.134 0.866 46 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -6.269 2.849 0.132 6.887 hybrid contribution -0.607 0.425 0.308 0.802 sum -6.876 3.274 0.440 7.628 Atomic orbital electron populations 1.21821 0.92299 1.03307 1.03638 1.23101 0.95640 0.79810 1.02809 1.86516 1.24331 1.32811 1.83666 1.23494 0.80732 0.92252 0.72215 1.90691 1.60503 1.42868 1.45006 1.22409 0.97322 0.91111 1.01216 0.85002 1.23678 0.98167 1.01023 0.95574 1.22410 0.93714 0.85538 0.93032 1.86611 1.96266 1.14326 1.36215 1.21976 0.99774 0.91161 0.88883 1.45793 1.33298 1.33763 1.26204 1.16955 0.82005 0.83057 0.79742 1.90863 1.29687 1.44126 1.74098 1.20117 0.96609 0.97793 1.02259 1.20066 0.97488 0.96462 0.93177 1.20406 0.93620 1.00470 1.00509 1.20643 0.96985 0.98865 1.02662 1.19559 1.00733 0.94842 0.90370 1.24033 0.99303 0.84027 1.08397 1.86520 1.39371 1.14462 1.94342 0.94328 0.80501 0.88141 0.78810 1.41996 1.25806 1.25157 1.21313 1.23044 0.93227 0.96501 1.00868 0.89948 0.91419 0.91336 0.91004 0.91088 0.89277 0.88228 0.77639 0.89378 0.89498 0.77862 0.91062 0.91497 0.90007 0.83259 0.89227 0.76538 1.17290 1.17414 0.75563 0.86576 0.88600 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.24 10.29 37.16 0.38 0.62 16 2 C 0.06 0.03 6.19 37.16 0.23 0.25 16 3 O -0.36 -0.63 10.22 -39.26 -0.40 -1.03 16 4 C 0.47 0.96 7.48 36.01 0.27 1.22 16 5 O -0.50 -2.40 15.65 -18.75 -0.29 -2.69 16 6 C -0.10 0.06 4.20 -90.95 -0.38 -0.32 16 7 H 0.13 -0.19 8.14 -51.93 -0.42 -0.61 16 8 C -0.15 0.30 7.01 -25.92 -0.18 0.12 16 9 C 0.09 -0.16 1.42 -89.83 -0.13 -0.29 16 10 O -0.53 0.76 13.41 -35.23 -0.47 0.28 16 11 C 0.11 -0.07 5.26 -4.05 -0.02 -0.09 16 12 N -0.74 0.54 5.31 -61.62 -0.33 0.21 16 13 C 0.59 1.66 7.79 -12.85 -0.10 1.56 16 14 O -0.51 -3.08 14.80 5.20 0.08 -3.01 16 15 C -0.06 -0.14 7.06 -81.98 -0.58 -0.72 16 16 C -0.06 -0.20 6.21 -104.16 -0.65 -0.85 16 17 C -0.09 -0.24 9.83 36.01 0.35 0.12 16 18 C -0.17 -0.37 10.66 -39.98 -0.43 -0.80 16 19 C 0.06 0.06 6.13 -81.95 -0.50 -0.44 16 20 C -0.05 0.09 2.98 36.01 0.11 0.20 16 21 O -0.54 0.80 12.86 -35.23 -0.45 0.35 16 22 Si 0.68 -2.61 30.98 -169.99 -5.27 -7.87 16 23 N -0.54 -0.26 5.47 -5.70 -0.03 -0.29 16 24 C -0.10 0.07 6.79 -25.94 -0.18 -0.11 16 25 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 26 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 27 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 28 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 29 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 30 H 0.09 -0.28 8.14 -51.93 -0.42 -0.71 16 31 H 0.10 -0.17 7.99 -51.93 -0.41 -0.58 16 32 H 0.38 -1.66 7.60 45.56 0.35 -1.31 16 33 H 0.09 -0.01 8.05 -51.93 -0.42 -0.43 16 34 H 0.09 0.04 8.14 -51.93 -0.42 -0.38 16 35 H 0.39 -1.34 6.46 -40.82 -0.26 -1.60 16 36 H 0.07 0.17 8.14 -51.93 -0.42 -0.25 16 37 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 38 H 0.08 0.32 6.49 -51.93 -0.34 -0.02 16 39 H 0.15 0.14 8.06 -52.48 -0.42 -0.28 16 40 H 0.09 -0.34 7.96 -51.93 -0.41 -0.75 16 41 H 0.39 -2.57 8.74 45.56 0.40 -2.17 16 42 H -0.25 0.35 7.11 56.52 0.40 0.75 16 43 H -0.25 0.44 7.11 56.52 0.40 0.84 16 44 H 0.41 -0.79 6.00 -40.82 -0.24 -1.03 16 45 H 0.12 -0.02 7.39 -51.93 -0.38 -0.40 16 46 H 0.10 -0.06 8.14 -51.93 -0.42 -0.48 16 LS Contribution 386.48 15.07 5.82 5.82 Total: 0.00 -10.85 386.48 -9.14 -19.99 By element: Atomic # 1 Polarization: -6.26 SS G_CDS: -6.00 Total: -12.26 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -1.80 Total: 0.48 kcal Atomic # 7 Polarization: 0.28 SS G_CDS: -0.36 Total: -0.08 kcal Atomic # 8 Polarization: -4.55 SS G_CDS: -1.54 Total: -6.09 kcal Atomic # 14 Polarization: -2.61 SS G_CDS: -5.27 Total: -7.87 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -10.85 -9.14 -19.99 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_13940406.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.787 kcal (2) G-P(sol) polarization free energy of solvation -10.850 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.636 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.143 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.993 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.780 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds