Wall clock time and date at job start Sun Mar 7 2021 07:05:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.45199 * 109.47486 * 2 1 4 4 C 1.34221 * 116.99912 * 179.97438 * 3 2 1 5 5 O 1.20830 * 120.00405 * 0.02562 * 4 3 2 6 6 C 1.50704 * 119.99963 * 179.97438 * 4 3 2 7 7 H 1.09002 * 112.90807 * 311.26133 * 6 4 3 8 8 C 1.53785 * 113.61264 * 82.50862 * 6 4 3 9 9 C 1.53779 * 87.08151 * 139.98283 * 8 6 4 10 10 O 1.42899 * 113.69094 * 89.12773 * 9 8 6 11 11 C 1.53002 * 113.61172 * 220.01749 * 9 8 6 12 12 N 1.46496 * 109.47004 * 282.49638 * 11 9 8 13 13 C 1.34782 * 119.99650 * 180.02562 * 12 11 9 14 14 O 1.21274 * 120.00280 * 359.97438 * 13 12 11 15 15 C 1.50704 * 119.99710 * 180.02562 * 13 12 11 16 16 C 1.50697 * 109.46956 * 180.02562 * 15 13 12 17 17 C 1.34853 * 125.89040 * 274.95497 * 16 15 13 18 18 C 1.40891 * 107.41915 * 179.80606 * 17 16 15 19 19 C 1.34851 * 107.41522 * 0.38017 * 18 17 16 20 20 C 1.50693 * 125.88818 * 179.88997 * 19 18 17 21 21 O 1.42907 * 109.47661 * 119.68845 * 20 19 18 22 22 Si 1.86298 * 109.47618 * 359.68535 * 20 19 18 23 23 N 1.36342 * 125.89216 * 94.99531 * 16 15 13 24 24 C 1.53778 * 87.08051 * 334.56576 * 9 8 6 25 25 H 1.08994 * 109.47329 * 300.00756 * 1 2 3 26 26 H 1.09003 * 109.46498 * 59.99843 * 1 2 3 27 27 H 1.08997 * 109.47268 * 179.97438 * 1 2 3 28 28 H 1.08994 * 109.47329 * 239.99244 * 2 1 3 29 29 H 1.09003 * 109.46498 * 120.00157 * 2 1 3 30 30 H 1.09002 * 113.61595 * 25.42912 * 8 6 4 31 31 H 1.09000 * 113.61099 * 254.53359 * 8 6 4 32 32 H 0.96697 * 113.99912 * 80.93620 * 10 9 8 33 33 H 1.09000 * 109.47037 * 162.50045 * 11 9 8 34 34 H 1.09002 * 109.47009 * 42.49876 * 11 9 8 35 35 H 0.97000 * 120.00552 * 0.02562 * 12 11 9 36 36 H 1.08997 * 109.47543 * 59.99510 * 15 13 12 37 37 H 1.09003 * 109.46653 * 299.99267 * 15 13 12 38 38 H 1.08000 * 126.28908 * 0.04935 * 17 16 15 39 39 H 1.07998 * 126.29135 * 180.24080 * 18 17 16 40 40 H 1.09000 * 109.46936 * 239.68468 * 20 19 18 41 41 H 0.96697 * 114.00527 * 179.97438 * 21 20 19 42 42 H 1.48506 * 109.99834 * 298.68714 * 22 20 19 43 43 H 1.48502 * 110.00011 * 59.99978 * 22 20 19 44 44 H 0.96991 * 125.63606 * 359.97438 * 23 16 15 45 45 H 1.09006 * 113.61270 * 139.98314 * 24 9 8 46 46 H 1.08996 * 113.61418 * 270.80024 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3447 1.5447 0.0005 5 8 4.0808 0.5864 0.0005 6 6 3.9209 2.9372 0.0000 7 1 3.4716 3.5820 -0.7554 8 6 3.9859 3.5775 1.3967 9 6 5.3563 4.1428 0.9875 10 8 5.2837 5.4202 0.3512 11 6 6.3980 4.0950 2.1072 12 7 6.1451 5.1821 3.0561 13 6 6.9432 5.3376 4.1310 14 8 7.8704 4.5774 4.3129 15 6 6.6827 6.4555 5.1075 16 6 7.7095 6.4093 6.2095 17 6 7.6391 5.6542 7.3245 18 6 8.8007 5.9085 8.0802 19 6 9.5327 6.8157 7.4022 20 6 10.8582 7.3850 7.8380 21 8 11.8551 7.0710 6.8635 22 14 11.3409 6.6485 9.4797 23 7 8.8697 7.1244 6.2515 24 6 5.4584 2.9679 0.0007 25 1 -0.3633 0.5139 0.8899 26 1 -0.3632 0.5139 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 1.8934 -0.5139 -0.8899 29 1 1.8932 -0.5139 0.8900 30 1 4.0376 2.8513 2.2080 31 1 3.2288 4.3441 1.5612 32 1 5.1958 6.1614 0.9660 33 1 7.3947 4.2093 1.6811 34 1 6.3315 3.1381 2.6247 35 1 5.4032 5.7900 2.9109 36 1 5.6862 6.3408 5.5338 37 1 6.7485 7.4126 4.5900 38 1 6.8410 4.9759 7.5878 39 1 9.0566 5.4610 9.0292 40 1 10.7741 8.4673 7.9360 41 1 12.7357 7.4075 7.0790 42 1 10.3282 6.9948 10.5092 43 1 11.4588 5.1731 9.3595 44 1 9.1730 7.7494 5.5748 45 1 5.8900 3.2424 -0.9619 46 1 5.9140 2.0755 0.4298 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_14644196.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:04 Heat of formation + Delta-G solvation = -126.353836 kcal Electronic energy + Delta-G solvation = -28872.610383 eV Core-core repulsion = 24537.928733 eV Total energy + Delta-G solvation = -4334.681650 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.161 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.32848 -42.09496 -40.87726 -39.97136 -37.67911 -37.63028 -36.04246 -35.40310 -33.31561 -32.72050 -31.89744 -30.30822 -28.93179 -27.14003 -26.32032 -24.89194 -23.79888 -22.06529 -21.89683 -21.29650 -21.04701 -20.87782 -19.16398 -18.56772 -18.43076 -18.10333 -17.69844 -17.53460 -17.38664 -16.76687 -16.64690 -16.26271 -15.76825 -15.44117 -15.13990 -15.04639 -14.84843 -14.75389 -14.56748 -14.41433 -14.18821 -14.00105 -13.92488 -13.63807 -13.54109 -13.28517 -13.24425 -12.98664 -12.86365 -12.77683 -12.63407 -12.45998 -12.38710 -11.88938 -11.79464 -11.53287 -11.46328 -11.05058 -10.94095 -10.44042 -10.27276 -9.73766 -8.90366 -4.96177 1.06958 1.15176 1.30112 1.56546 1.61329 1.72448 1.85032 2.09651 2.18066 2.44598 2.65084 3.00174 3.25068 3.32817 3.37545 3.41455 3.57327 3.83577 3.89302 3.92709 3.93097 3.97737 3.98653 4.06406 4.25676 4.27390 4.27904 4.30280 4.44060 4.46615 4.53026 4.63197 4.69058 4.71880 4.77927 4.79718 4.80666 4.98103 4.99849 5.17035 5.27186 5.32555 5.45473 6.03081 6.15988 6.21681 6.30230 6.56211 6.66147 6.74033 7.11687 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.470 3.530 5 O -0.504 6.504 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.145 4.145 9 C 0.098 3.902 10 O -0.530 6.530 11 C 0.104 3.896 12 N -0.735 5.735 13 C 0.512 3.488 14 O -0.515 6.515 15 C -0.070 4.070 16 C 0.034 3.966 17 C -0.170 4.170 18 C -0.195 4.195 19 C 0.037 3.963 20 C -0.053 4.053 21 O -0.550 6.550 22 Si 0.714 3.286 23 N -0.532 5.532 24 C -0.101 4.101 25 H 0.067 0.933 26 H 0.067 0.933 27 H 0.081 0.919 28 H 0.071 0.929 29 H 0.071 0.929 30 H 0.098 0.902 31 H 0.091 0.909 32 H 0.378 0.622 33 H 0.081 0.919 34 H 0.084 0.916 35 H 0.397 0.603 36 H 0.119 0.881 37 H 0.102 0.898 38 H 0.137 0.863 39 H 0.134 0.866 40 H 0.071 0.929 41 H 0.384 0.616 42 H -0.254 1.254 43 H -0.250 1.250 44 H 0.414 0.586 45 H 0.094 0.906 46 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.744 6.065 0.863 6.713 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.392 6.392 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.183 4.183 9 C 0.056 3.944 10 O -0.336 6.336 11 C -0.020 4.020 12 N -0.390 5.390 13 C 0.297 3.703 14 O -0.388 6.388 15 C -0.110 4.110 16 C -0.079 4.079 17 C -0.195 4.195 18 C -0.220 4.220 19 C -0.076 4.076 20 C -0.163 4.163 21 O -0.356 6.356 22 Si 0.613 3.387 23 N -0.127 5.127 24 C -0.138 4.138 25 H 0.086 0.914 26 H 0.087 0.913 27 H 0.100 0.900 28 H 0.090 0.910 29 H 0.089 0.911 30 H 0.117 0.883 31 H 0.109 0.891 32 H 0.226 0.774 33 H 0.099 0.901 34 H 0.102 0.898 35 H 0.231 0.769 36 H 0.137 0.863 37 H 0.120 0.880 38 H 0.155 0.845 39 H 0.151 0.849 40 H 0.089 0.911 41 H 0.231 0.769 42 H -0.179 1.179 43 H -0.174 1.174 44 H 0.250 0.750 45 H 0.113 0.887 46 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -2.490 4.068 0.706 4.821 hybrid contribution -0.841 0.828 -0.452 1.264 sum -3.332 4.896 0.254 5.927 Atomic orbital electron populations 1.21820 0.92301 1.03285 1.03650 1.23096 0.95637 0.79846 1.02784 1.86514 1.24353 1.32769 1.83669 1.23519 0.80710 0.92296 0.72182 1.90692 1.60515 1.42908 1.45049 1.22418 0.97256 0.91053 1.01394 0.85014 1.23661 0.98217 1.01012 0.95370 1.22365 0.93690 0.85446 0.92893 1.86600 1.96051 1.14510 1.36448 1.21919 0.99471 0.91473 0.89088 1.45886 1.33597 1.33618 1.25919 1.20619 0.82147 0.86155 0.81381 1.90810 1.29525 1.44645 1.73847 1.20116 0.99105 0.98415 0.93394 1.19424 0.89883 1.00513 0.98117 1.20542 1.00254 1.03279 0.95382 1.20514 0.97591 1.02100 1.01793 1.19676 0.94825 1.03185 0.89949 1.24437 0.86049 1.02394 1.03409 1.86517 1.20733 1.80800 1.47594 0.95407 0.87678 0.81464 0.74102 1.41742 1.16802 1.35750 1.18386 1.23049 0.93239 0.96653 1.00892 0.91384 0.91349 0.89979 0.91048 0.91103 0.88335 0.89056 0.77363 0.90054 0.89813 0.76855 0.86346 0.88024 0.84473 0.84886 0.91139 0.76860 1.17857 1.17396 0.74974 0.88742 0.86726 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.24 10.29 37.16 0.38 0.62 16 2 C 0.06 0.03 6.19 37.16 0.23 0.26 16 3 O -0.36 -0.63 10.22 -39.23 -0.40 -1.03 16 4 C 0.47 0.96 7.48 36.01 0.27 1.23 16 5 O -0.50 -2.47 15.65 -18.75 -0.29 -2.76 16 6 C -0.10 0.08 4.20 -90.96 -0.38 -0.31 16 7 H 0.13 -0.21 8.14 -51.93 -0.42 -0.63 16 8 C -0.14 0.36 7.02 -25.92 -0.18 0.18 16 9 C 0.10 -0.21 1.41 -89.81 -0.13 -0.33 16 10 O -0.53 1.14 13.41 -35.23 -0.47 0.67 16 11 C 0.10 -0.10 5.26 -4.04 -0.02 -0.12 16 12 N -0.74 1.80 5.33 -60.29 -0.32 1.48 16 13 C 0.51 0.44 7.82 -10.98 -0.09 0.35 16 14 O -0.51 -3.28 16.03 5.56 0.09 -3.19 16 15 C -0.07 0.12 6.24 -29.03 -0.18 -0.06 16 16 C 0.03 0.08 5.66 -81.79 -0.46 -0.38 16 17 C -0.17 -0.68 10.76 -39.78 -0.43 -1.11 16 18 C -0.20 -0.93 9.37 -39.78 -0.37 -1.30 16 19 C 0.04 0.14 6.54 -81.79 -0.53 -0.39 16 20 C -0.05 -0.04 3.07 36.00 0.11 0.07 16 21 O -0.55 -0.63 12.86 -35.23 -0.45 -1.08 16 22 Si 0.71 -0.24 30.59 -169.99 -5.20 -5.44 16 23 N -0.53 -1.36 6.07 -5.44 -0.03 -1.39 16 24 C -0.10 0.07 6.79 -25.92 -0.18 -0.11 16 25 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 26 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 27 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 28 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 29 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 30 H 0.10 -0.20 7.99 -51.93 -0.41 -0.61 16 31 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 32 H 0.38 -2.16 7.62 45.56 0.35 -1.82 16 33 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 34 H 0.08 0.01 8.05 -51.93 -0.42 -0.41 16 35 H 0.40 -2.38 7.33 -40.82 -0.30 -2.68 16 36 H 0.12 -0.48 8.14 -51.93 -0.42 -0.91 16 37 H 0.10 -0.45 8.14 -51.93 -0.42 -0.87 16 38 H 0.14 0.34 8.06 -52.49 -0.42 -0.08 16 39 H 0.13 0.55 6.22 -52.49 -0.33 0.23 16 40 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 41 H 0.38 -1.62 8.74 45.56 0.40 -1.22 16 42 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 43 H -0.25 -0.88 7.11 56.52 0.40 -0.48 16 44 H 0.41 0.15 8.96 -40.82 -0.37 -0.22 16 45 H 0.09 -0.05 8.14 -51.93 -0.42 -0.48 16 46 H 0.11 0.01 7.40 -51.93 -0.38 -0.37 16 LS Contribution 390.35 15.07 5.88 5.88 Total: 0.00 -13.74 390.35 -9.31 -23.05 By element: Atomic # 1 Polarization: -8.62 SS G_CDS: -6.15 Total: -14.77 kcal Atomic # 6 Polarization: 0.54 SS G_CDS: -1.96 Total: -1.42 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -0.35 Total: 0.09 kcal Atomic # 8 Polarization: -5.87 SS G_CDS: -1.53 Total: -7.40 kcal Atomic # 14 Polarization: -0.24 SS G_CDS: -5.20 Total: -5.44 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -13.74 -9.31 -23.05 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_14644196.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.302 kcal (2) G-P(sol) polarization free energy of solvation -13.743 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.045 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.309 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.052 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.354 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds