Wall clock time and date at job start Sun Mar 7 2021 07:05:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.45199 * 109.47486 * 2 1 4 4 C 1.34221 * 116.99912 * 179.97438 * 3 2 1 5 5 O 1.20830 * 120.00405 * 0.02562 * 4 3 2 6 6 C 1.50704 * 119.99963 * 179.97438 * 4 3 2 7 7 H 1.09002 * 112.90807 * 311.26133 * 6 4 3 8 8 C 1.53785 * 113.61264 * 82.50862 * 6 4 3 9 9 C 1.53779 * 87.08151 * 139.98283 * 8 6 4 10 10 O 1.42899 * 113.69094 * 89.12773 * 9 8 6 11 11 C 1.53002 * 113.61172 * 220.01749 * 9 8 6 12 12 N 1.46496 * 109.47004 * 282.49638 * 11 9 8 13 13 C 1.34782 * 119.99650 * 180.02562 * 12 11 9 14 14 O 1.21274 * 120.00280 * 359.97438 * 13 12 11 15 15 C 1.50704 * 119.99710 * 180.02562 * 13 12 11 16 16 C 1.50697 * 109.46956 * 180.02562 * 15 13 12 17 17 C 1.34853 * 125.89040 * 274.95497 * 16 15 13 18 18 C 1.40891 * 107.41915 * 179.80606 * 17 16 15 19 19 C 1.34851 * 107.41522 * 0.38017 * 18 17 16 20 20 C 1.50693 * 125.88818 * 179.88997 * 19 18 17 21 21 O 1.42907 * 109.47661 * 119.68845 * 20 19 18 22 22 Si 1.86298 * 109.47618 * 359.68535 * 20 19 18 23 23 N 1.36342 * 125.89216 * 94.99531 * 16 15 13 24 24 C 1.53778 * 87.08051 * 334.56576 * 9 8 6 25 25 H 1.08994 * 109.47329 * 300.00756 * 1 2 3 26 26 H 1.09003 * 109.46498 * 59.99843 * 1 2 3 27 27 H 1.08997 * 109.47268 * 179.97438 * 1 2 3 28 28 H 1.08994 * 109.47329 * 239.99244 * 2 1 3 29 29 H 1.09003 * 109.46498 * 120.00157 * 2 1 3 30 30 H 1.09002 * 113.61595 * 25.42912 * 8 6 4 31 31 H 1.09000 * 113.61099 * 254.53359 * 8 6 4 32 32 H 0.96697 * 113.99912 * 80.93620 * 10 9 8 33 33 H 1.09000 * 109.47037 * 162.50045 * 11 9 8 34 34 H 1.09002 * 109.47009 * 42.49876 * 11 9 8 35 35 H 0.97000 * 120.00552 * 0.02562 * 12 11 9 36 36 H 1.08997 * 109.47543 * 59.99510 * 15 13 12 37 37 H 1.09003 * 109.46653 * 299.99267 * 15 13 12 38 38 H 1.08000 * 126.28908 * 0.04935 * 17 16 15 39 39 H 1.07998 * 126.29135 * 180.24080 * 18 17 16 40 40 H 1.09000 * 109.46936 * 239.68468 * 20 19 18 41 41 H 0.96697 * 114.00527 * 179.97438 * 21 20 19 42 42 H 1.48506 * 109.99834 * 298.68714 * 22 20 19 43 43 H 1.48502 * 110.00011 * 59.99978 * 22 20 19 44 44 H 0.96991 * 125.63606 * 359.97438 * 23 16 15 45 45 H 1.09006 * 113.61270 * 139.98314 * 24 9 8 46 46 H 1.08996 * 113.61418 * 270.80024 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3447 1.5447 0.0005 5 8 4.0808 0.5864 0.0005 6 6 3.9209 2.9372 0.0000 7 1 3.4716 3.5820 -0.7554 8 6 3.9859 3.5775 1.3967 9 6 5.3563 4.1428 0.9875 10 8 5.2837 5.4202 0.3512 11 6 6.3980 4.0950 2.1072 12 7 6.1451 5.1821 3.0561 13 6 6.9432 5.3376 4.1310 14 8 7.8704 4.5774 4.3129 15 6 6.6827 6.4555 5.1075 16 6 7.7095 6.4093 6.2095 17 6 7.6391 5.6542 7.3245 18 6 8.8007 5.9085 8.0802 19 6 9.5327 6.8157 7.4022 20 6 10.8582 7.3850 7.8380 21 8 11.8551 7.0710 6.8635 22 14 11.3409 6.6485 9.4797 23 7 8.8697 7.1244 6.2515 24 6 5.4584 2.9679 0.0007 25 1 -0.3633 0.5139 0.8899 26 1 -0.3632 0.5139 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 1.8934 -0.5139 -0.8899 29 1 1.8932 -0.5139 0.8900 30 1 4.0376 2.8513 2.2080 31 1 3.2288 4.3441 1.5612 32 1 5.1958 6.1614 0.9660 33 1 7.3947 4.2093 1.6811 34 1 6.3315 3.1381 2.6247 35 1 5.4032 5.7900 2.9109 36 1 5.6862 6.3408 5.5338 37 1 6.7485 7.4126 4.5900 38 1 6.8410 4.9759 7.5878 39 1 9.0566 5.4610 9.0292 40 1 10.7741 8.4673 7.9360 41 1 12.7357 7.4075 7.0790 42 1 10.3282 6.9948 10.5092 43 1 11.4588 5.1731 9.3595 44 1 9.1730 7.7494 5.5748 45 1 5.8900 3.2424 -0.9619 46 1 5.9140 2.0755 0.4298 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_14644196.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:03 Heat of formation + Delta-G solvation = -134.659360 kcal Electronic energy + Delta-G solvation = -28872.970538 eV Core-core repulsion = 24537.928733 eV Total energy + Delta-G solvation = -4335.041805 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.161 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.46502 -42.14803 -40.94605 -40.02103 -37.80282 -37.68646 -35.99754 -35.38756 -33.35231 -32.70030 -32.10328 -30.34386 -28.91289 -27.03164 -26.34349 -24.97336 -23.78002 -22.14084 -21.92197 -21.50811 -21.17687 -20.80412 -19.18687 -18.64043 -18.44972 -18.16509 -17.80356 -17.50738 -17.40330 -16.77275 -16.62795 -16.17967 -15.83456 -15.45049 -15.21526 -15.09789 -14.96115 -14.87417 -14.60083 -14.48042 -14.20919 -14.10412 -13.81859 -13.54868 -13.50758 -13.44681 -13.28849 -13.00642 -12.89562 -12.77782 -12.59469 -12.56857 -12.30920 -12.05709 -11.77758 -11.60880 -11.50636 -11.09769 -10.93088 -10.45824 -10.27402 -9.97191 -9.08265 -4.99367 0.92823 1.01132 1.26378 1.53912 1.56840 1.64768 1.71740 2.04615 2.13878 2.36602 2.83364 3.08088 3.34575 3.40821 3.44017 3.46207 3.58417 3.88124 3.90645 3.92875 3.97181 4.00518 4.13610 4.18369 4.23614 4.27988 4.29148 4.32767 4.54851 4.55307 4.62998 4.64656 4.66485 4.78109 4.84321 4.85979 4.87611 5.04863 5.08310 5.10620 5.11920 5.23302 5.38558 5.82371 5.95259 6.37641 6.57562 6.60273 6.64349 6.84019 7.16642 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.101 4.101 7 H 0.146 0.854 8 C -0.134 4.134 9 C 0.118 3.882 10 O -0.538 6.538 11 C 0.108 3.892 12 N -0.713 5.713 13 C 0.511 3.489 14 O -0.579 6.579 15 C -0.063 4.063 16 C 0.037 3.963 17 C -0.202 4.202 18 C -0.230 4.230 19 C 0.019 3.981 20 C -0.059 4.059 21 O -0.571 6.571 22 Si 0.813 3.187 23 N -0.530 5.530 24 C -0.111 4.111 25 H 0.070 0.930 26 H 0.069 0.931 27 H 0.095 0.905 28 H 0.066 0.934 29 H 0.067 0.933 30 H 0.093 0.907 31 H 0.116 0.884 32 H 0.395 0.605 33 H 0.063 0.937 34 H 0.069 0.931 35 H 0.419 0.581 36 H 0.150 0.850 37 H 0.139 0.861 38 H 0.142 0.858 39 H 0.125 0.875 40 H 0.100 0.900 41 H 0.406 0.594 42 H -0.287 1.287 43 H -0.310 1.310 44 H 0.424 0.576 45 H 0.092 0.908 46 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.018 8.522 0.179 9.423 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.275 6.275 4 C 0.314 3.686 5 O -0.430 6.430 6 C -0.119 4.119 7 H 0.164 0.836 8 C -0.172 4.172 9 C 0.076 3.924 10 O -0.346 6.346 11 C -0.016 4.016 12 N -0.368 5.368 13 C 0.298 3.702 14 O -0.457 6.457 15 C -0.103 4.103 16 C -0.077 4.077 17 C -0.226 4.226 18 C -0.255 4.255 19 C -0.095 4.095 20 C -0.168 4.168 21 O -0.381 6.381 22 Si 0.719 3.281 23 N -0.125 5.125 24 C -0.149 4.149 25 H 0.089 0.911 26 H 0.088 0.912 27 H 0.114 0.886 28 H 0.085 0.915 29 H 0.085 0.915 30 H 0.111 0.889 31 H 0.134 0.866 32 H 0.247 0.753 33 H 0.081 0.919 34 H 0.087 0.913 35 H 0.257 0.743 36 H 0.167 0.833 37 H 0.157 0.843 38 H 0.160 0.840 39 H 0.142 0.858 40 H 0.118 0.882 41 H 0.258 0.742 42 H -0.214 1.214 43 H -0.239 1.239 44 H 0.262 0.738 45 H 0.110 0.890 46 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -3.794 6.614 -0.007 7.625 hybrid contribution -0.472 -0.013 -0.266 0.542 sum -4.266 6.601 -0.273 7.864 Atomic orbital electron populations 1.21823 0.90542 1.04282 1.03822 1.23263 0.97046 0.79396 1.02410 1.86524 1.24211 1.33431 1.83368 1.24107 0.80558 0.93017 0.70957 1.90675 1.61209 1.44296 1.46852 1.22542 0.96741 0.89644 1.03019 0.83599 1.23640 0.98375 1.01144 0.94009 1.22027 0.93405 0.85353 0.91652 1.86583 1.95991 1.14784 1.37281 1.21772 0.99077 0.91331 0.89468 1.45655 1.33467 1.33174 1.24525 1.21072 0.81307 0.85894 0.81878 1.90798 1.32400 1.47109 1.75423 1.20284 0.99153 0.98980 0.91915 1.19976 0.90218 0.99125 0.98378 1.20798 1.00627 1.04550 0.96605 1.20713 0.98963 1.03451 1.02327 1.20148 0.95999 1.03094 0.90303 1.24592 0.84891 1.04073 1.03281 1.86459 1.22270 1.81411 1.47943 0.94509 0.85102 0.76777 0.71729 1.41837 1.16702 1.35748 1.18228 1.23068 0.93523 0.97045 1.01226 0.91101 0.91195 0.88598 0.91539 0.91476 0.88861 0.86554 0.75348 0.91863 0.91269 0.74280 0.83254 0.84277 0.84048 0.85772 0.88243 0.74222 1.21405 1.23896 0.73758 0.88952 0.88141 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.51 10.29 71.98 0.74 1.25 16 2 C 0.05 0.08 6.19 71.98 0.45 0.53 16 3 O -0.36 -1.36 10.22 -51.33 -0.52 -1.88 16 4 C 0.47 2.27 7.48 71.24 0.53 2.80 16 5 O -0.54 -6.24 15.65 21.95 0.34 -5.90 16 6 C -0.10 0.18 4.20 -11.01 -0.05 0.13 16 7 H 0.15 -0.65 8.14 -2.39 -0.02 -0.67 16 8 C -0.13 0.82 7.02 31.12 0.22 1.04 16 9 C 0.12 -0.58 1.41 -10.27 -0.01 -0.60 16 10 O -0.54 3.39 13.41 -148.98 -2.00 1.39 16 11 C 0.11 -0.19 5.26 86.38 0.45 0.27 16 12 N -0.71 4.41 5.33 -463.06 -2.47 1.95 16 13 C 0.51 0.58 7.82 87.66 0.69 1.26 16 14 O -0.58 -8.14 16.03 -3.01 -0.05 -8.19 16 15 C -0.06 0.34 6.24 29.10 0.18 0.52 16 16 C 0.04 0.17 5.66 41.08 0.23 0.41 16 17 C -0.20 -1.90 10.76 22.14 0.24 -1.66 16 18 C -0.23 -2.69 9.37 22.14 0.21 -2.48 16 19 C 0.02 0.16 6.54 41.08 0.27 0.43 16 20 C -0.06 -0.09 3.07 71.23 0.22 0.13 16 21 O -0.57 -1.11 12.86 -148.98 -1.92 -3.03 16 22 Si 0.81 0.30 30.59 68.60 2.10 2.40 16 23 N -0.53 -2.65 6.07 -171.12 -1.04 -3.69 16 24 C -0.11 0.07 6.79 31.12 0.21 0.28 16 25 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 26 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 27 H 0.10 -0.59 8.14 -2.39 -0.02 -0.61 16 28 H 0.07 0.15 8.13 -2.39 -0.02 0.13 16 29 H 0.07 0.14 8.13 -2.39 -0.02 0.12 16 30 H 0.09 -0.41 7.99 -2.39 -0.02 -0.43 16 31 H 0.12 -1.25 8.14 -2.39 -0.02 -1.27 16 32 H 0.40 -5.71 7.62 -74.06 -0.56 -6.28 16 33 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 34 H 0.07 0.12 8.05 -2.39 -0.02 0.10 16 35 H 0.42 -6.25 7.33 -92.71 -0.68 -6.93 16 36 H 0.15 -1.68 8.14 -2.39 -0.02 -1.70 16 37 H 0.14 -1.75 8.14 -2.39 -0.02 -1.77 16 38 H 0.14 0.97 8.06 -2.91 -0.02 0.94 16 39 H 0.12 1.45 6.22 -2.91 -0.02 1.44 16 40 H 0.10 -0.43 7.96 -2.39 -0.02 -0.45 16 41 H 0.41 -3.83 8.74 -74.06 -0.65 -4.48 16 42 H -0.29 -1.58 7.11 99.48 0.71 -0.87 16 43 H -0.31 -3.20 7.11 99.48 0.71 -2.49 16 44 H 0.42 -0.05 8.96 -92.72 -0.83 -0.88 16 45 H 0.09 -0.04 8.14 -2.38 -0.02 -0.05 16 46 H 0.10 0.23 7.40 -2.39 -0.02 0.22 16 Total: 0.00 -36.37 390.35 -2.62 -38.98 By element: Atomic # 1 Polarization: -24.69 SS G_CDS: -1.64 Total: -26.33 kcal Atomic # 6 Polarization: -0.27 SS G_CDS: 4.58 Total: 4.30 kcal Atomic # 7 Polarization: 1.76 SS G_CDS: -3.51 Total: -1.75 kcal Atomic # 8 Polarization: -13.47 SS G_CDS: -4.14 Total: -17.61 kcal Atomic # 14 Polarization: 0.30 SS G_CDS: 2.10 Total: 2.40 kcal Total: -36.37 -2.62 -38.98 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_14644196.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.675 kcal (2) G-P(sol) polarization free energy of solvation -36.368 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.043 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.616 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.985 kcal (6) G-S(sol) free energy of system = (1) + (5) -134.659 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds