Wall clock time and date at job start Sun Mar 7 2021 07:05:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45199 * 109.47075 * 2 1 4 4 C 1.34230 * 116.99614 * 179.97438 * 3 2 1 5 5 O 1.20824 * 120.00179 * 0.02562 * 4 3 2 6 6 C 1.50706 * 119.99717 * 179.97438 * 4 3 2 7 7 H 1.09001 * 112.84753 * 48.80875 * 6 4 3 8 8 C 1.53781 * 113.61278 * 179.97438 * 6 4 3 9 9 C 1.53780 * 87.07717 * 139.98407 * 8 6 4 10 10 O 1.42905 * 113.61426 * 89.20456 * 9 8 6 11 11 C 1.53003 * 113.61500 * 220.01686 * 9 8 6 12 12 N 1.46504 * 109.47293 * 179.97438 * 11 9 8 13 13 C 1.34774 * 120.00037 * 180.02562 * 12 11 9 14 14 O 1.21289 * 119.99863 * 0.02562 * 13 12 11 15 15 C 1.50699 * 120.00255 * 180.02562 * 13 12 11 16 16 C 1.53547 * 109.82002 * 278.20948 * 15 13 12 17 17 C 1.53034 * 108.55927 * 179.50865 * 16 15 13 18 18 C 1.50200 * 110.32106 * 49.57066 * 17 16 15 19 19 C 1.50706 * 118.55015 * 159.96471 * 18 17 16 20 20 O 1.42899 * 109.47151 * 299.98119 * 19 18 17 21 21 Si 1.86298 * 109.47086 * 179.97438 * 19 18 17 22 22 C 1.31117 * 122.90365 * 339.94893 * 18 17 16 23 23 N 1.38921 * 121.85107 * 0.39771 * 22 18 17 24 24 C 1.53773 * 87.08290 * 334.56800 * 9 8 6 25 25 H 1.09002 * 109.47153 * 300.00058 * 1 2 3 26 26 H 1.08998 * 109.47533 * 59.99688 * 1 2 3 27 27 H 1.08996 * 109.47853 * 180.02562 * 1 2 3 28 28 H 1.09002 * 109.47153 * 239.99942 * 2 1 3 29 29 H 1.09001 * 109.46832 * 120.00132 * 2 1 3 30 30 H 1.08998 * 113.61881 * 254.53186 * 8 6 4 31 31 H 1.09005 * 113.61420 * 25.35640 * 8 6 4 32 32 H 0.96702 * 113.99810 * 180.02562 * 10 9 8 33 33 H 1.08998 * 109.47708 * 300.00640 * 11 9 8 34 34 H 1.09006 * 109.46419 * 60.00261 * 11 9 8 35 35 H 0.97005 * 119.99551 * 0.02562 * 12 11 9 36 36 H 1.09003 * 109.81105 * 39.13058 * 15 13 12 37 37 H 1.09001 * 109.61835 * 299.22760 * 16 15 13 38 38 H 1.08995 * 109.62080 * 59.78220 * 16 15 13 39 39 H 1.08998 * 109.33343 * 289.30343 * 17 16 15 40 40 H 1.09007 * 109.32317 * 169.82970 * 17 16 15 41 41 H 1.09002 * 109.46546 * 59.98211 * 19 18 17 42 42 H 0.96704 * 113.99832 * 299.99745 * 20 19 18 43 43 H 1.48498 * 110.00322 * 58.68513 * 21 19 18 44 44 H 1.48496 * 109.99895 * 180.02562 * 21 19 18 45 45 H 1.08003 * 119.07376 * 180.43118 * 22 18 17 46 46 H 0.97000 * 120.56029 * 166.70684 * 23 22 18 47 47 H 1.09000 * 113.61689 * 270.87815 * 24 9 8 48 48 H 1.09007 * 113.61242 * 139.98164 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5447 0.0005 5 8 4.0807 0.5865 0.0005 6 6 3.9207 2.9374 0.0000 7 1 3.4708 3.5818 0.7553 8 6 5.4582 2.9680 0.0013 9 6 5.3573 4.1417 -0.9872 10 8 5.2839 5.4199 -0.3525 11 6 6.4005 4.0927 -2.1054 12 7 6.2224 5.2466 -2.9903 13 6 7.0344 5.4123 -4.0532 14 8 7.9122 4.6060 -4.2773 15 6 6.8516 6.5996 -4.9632 16 6 5.7275 6.3157 -5.9699 17 6 5.5583 7.5420 -6.8697 18 6 6.8893 7.9789 -7.4115 19 6 6.9158 8.8459 -8.6440 20 8 6.2917 8.1534 -9.7270 21 14 8.6818 9.2357 -9.0912 22 6 8.0292 7.6396 -6.8595 23 7 8.0852 6.8368 -5.7272 24 6 3.9875 3.5759 -1.3973 25 1 -0.3633 0.5138 0.8900 26 1 -0.3634 0.5139 -0.8899 27 1 -0.3635 -1.0276 0.0005 28 1 1.8933 -0.5138 -0.8900 29 1 1.8933 -0.5139 0.8900 30 1 5.8887 3.2437 0.9640 31 1 5.9132 2.0740 -0.4253 32 1 5.2199 6.1621 -0.9691 33 1 7.4000 4.1180 -1.6713 34 1 6.2762 3.1735 -2.6780 35 1 5.5200 5.8912 -2.8113 36 1 6.6065 7.4828 -4.3734 37 1 5.9901 5.4495 -6.5772 38 1 4.7975 6.1229 -5.4352 39 1 5.1192 8.3555 -6.2922 40 1 4.8956 7.2926 -7.6984 41 1 6.3777 9.7732 -8.4473 42 1 6.7189 7.3170 -9.9573 43 1 9.4345 7.9782 -9.3305 44 1 8.7215 10.0907 -10.3047 45 1 8.9505 7.9947 -7.2972 46 1 8.9240 6.4396 -5.4452 47 1 4.0403 2.8488 -2.2077 48 1 3.2306 4.3424 -1.5638 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_15413834.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:08 Heat of formation + Delta-G solvation = -150.211299 kcal Electronic energy + Delta-G solvation = -29973.607824 eV Core-core repulsion = 25610.580158 eV Total energy + Delta-G solvation = -4363.027666 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.176 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -42.21147 -41.46137 -40.50142 -39.47145 -37.69900 -37.46290 -36.15849 -35.55258 -33.26623 -33.20086 -32.73716 -30.01662 -27.66036 -27.14670 -26.13642 -25.33473 -23.95707 -23.59632 -21.99609 -21.93780 -20.92079 -19.74410 -19.41058 -18.78772 -18.34094 -17.76676 -17.68176 -17.43690 -17.25361 -16.71822 -16.60723 -16.39098 -16.09554 -15.80596 -15.36626 -15.27643 -15.22869 -14.88026 -14.76010 -14.41743 -14.31724 -14.07298 -13.94923 -13.90123 -13.67979 -13.33574 -13.20046 -13.02472 -12.93026 -12.85600 -12.65760 -12.41730 -12.27703 -12.00134 -11.85893 -11.71278 -11.55396 -11.49291 -11.31545 -11.10580 -10.94408 -10.42933 -10.34167 -8.53678 -4.91374 1.12335 1.24320 1.32884 1.45609 1.55021 1.63073 1.68858 2.04778 2.49417 2.59910 2.94943 3.15890 3.26853 3.30350 3.40342 3.53197 3.62649 3.76550 3.80925 3.88906 3.91203 3.96505 4.02800 4.18214 4.20119 4.25463 4.28479 4.39559 4.42527 4.49505 4.53691 4.60906 4.63543 4.68782 4.71777 4.75336 4.76819 4.93886 4.95474 4.98290 5.00143 5.09689 5.22555 5.43200 5.48555 6.00335 6.20545 6.25146 6.56937 6.71294 6.73461 6.89567 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.470 3.530 5 O -0.505 6.505 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.101 4.101 9 C 0.098 3.902 10 O -0.529 6.529 11 C 0.104 3.896 12 N -0.728 5.728 13 C 0.514 3.486 14 O -0.524 6.524 15 C 0.137 3.863 16 C -0.127 4.127 17 C -0.054 4.054 18 C -0.277 4.277 19 C -0.049 4.049 20 O -0.536 6.536 21 Si 0.661 3.339 22 C 0.143 3.857 23 N -0.731 5.731 24 C -0.145 4.145 25 H 0.068 0.932 26 H 0.067 0.933 27 H 0.082 0.918 28 H 0.071 0.929 29 H 0.071 0.929 30 H 0.095 0.905 31 H 0.115 0.885 32 H 0.377 0.623 33 H 0.084 0.916 34 H 0.085 0.915 35 H 0.399 0.601 36 H 0.093 0.907 37 H 0.075 0.925 38 H 0.078 0.922 39 H 0.068 0.932 40 H 0.079 0.921 41 H 0.109 0.891 42 H 0.373 0.627 43 H -0.264 1.264 44 H -0.261 1.261 45 H 0.134 0.866 46 H 0.409 0.591 47 H 0.098 0.902 48 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.162 2.998 2.910 5.239 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.392 6.392 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.139 4.139 9 C 0.056 3.944 10 O -0.335 6.335 11 C -0.020 4.020 12 N -0.382 5.382 13 C 0.299 3.701 14 O -0.399 6.399 15 C 0.028 3.972 16 C -0.165 4.165 17 C -0.091 4.091 18 C -0.287 4.287 19 C -0.160 4.160 20 O -0.342 6.342 21 Si 0.564 3.436 22 C 0.022 3.978 23 N -0.364 5.364 24 C -0.183 4.183 25 H 0.087 0.913 26 H 0.086 0.914 27 H 0.100 0.900 28 H 0.089 0.911 29 H 0.090 0.910 30 H 0.113 0.887 31 H 0.133 0.867 32 H 0.226 0.774 33 H 0.102 0.898 34 H 0.103 0.897 35 H 0.234 0.766 36 H 0.111 0.889 37 H 0.094 0.906 38 H 0.097 0.903 39 H 0.086 0.914 40 H 0.097 0.903 41 H 0.126 0.874 42 H 0.220 0.780 43 H -0.189 1.189 44 H -0.186 1.186 45 H 0.151 0.849 46 H 0.246 0.754 47 H 0.117 0.883 48 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -2.166 2.158 2.772 4.127 hybrid contribution -0.546 -0.738 -0.778 1.203 sum -2.712 1.420 1.995 3.654 Atomic orbital electron populations 1.21821 0.92289 1.03297 1.03667 1.23097 0.95650 0.79823 1.02775 1.86518 1.24336 1.32782 1.83647 1.23518 0.80725 0.92289 0.72176 1.90690 1.60521 1.42913 1.45076 1.22413 0.97251 0.91084 1.01384 0.84980 1.23063 0.93293 0.96617 1.00888 1.22367 0.93644 0.85519 0.92859 1.86621 1.96263 1.14317 1.36273 1.21978 1.00074 0.89607 0.90357 1.45826 1.36063 1.28124 1.28194 1.20640 0.81371 0.87233 0.80808 1.90768 1.32818 1.44490 1.71812 1.21002 0.87895 0.95587 0.92744 1.21879 0.96908 1.00124 0.97627 1.19944 0.94886 0.95871 0.98417 1.20926 0.94570 1.11057 1.02127 1.24667 1.08978 0.96874 0.85474 1.86563 1.56822 1.38758 1.52009 0.95616 0.76600 0.83509 0.87913 1.20366 0.97346 0.92135 0.87942 1.44268 1.09476 1.54557 1.28125 1.23675 0.98232 1.01009 0.95357 0.91334 0.91377 0.89976 0.91108 0.91042 0.88686 0.86715 0.77391 0.89764 0.89678 0.76612 0.88919 0.90613 0.90295 0.91365 0.90278 0.87364 0.77968 1.18912 1.18579 0.84890 0.75360 0.88344 0.88985 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.28 10.29 37.16 0.38 0.67 16 2 C 0.06 0.00 6.19 37.16 0.23 0.23 16 3 O -0.36 -0.47 10.22 -39.26 -0.40 -0.87 16 4 C 0.47 0.70 7.48 36.01 0.27 0.97 16 5 O -0.50 -2.16 15.65 -18.75 -0.29 -2.46 16 6 C -0.10 0.14 4.20 -90.96 -0.38 -0.24 16 7 H 0.13 -0.29 8.14 -51.93 -0.42 -0.71 16 8 C -0.10 0.15 6.80 -25.92 -0.18 -0.02 16 9 C 0.10 -0.30 1.49 -89.81 -0.13 -0.43 16 10 O -0.53 1.59 13.41 -35.23 -0.47 1.12 16 11 C 0.10 -0.24 5.32 -4.04 -0.02 -0.26 16 12 N -0.73 2.62 5.34 -60.29 -0.32 2.30 16 13 C 0.51 -0.37 7.08 -10.99 -0.08 -0.45 16 14 O -0.52 -1.89 16.10 5.55 0.09 -1.80 16 15 C 0.14 -0.29 3.36 -68.51 -0.23 -0.52 16 16 C -0.13 0.26 5.47 -26.43 -0.14 0.12 16 17 C -0.05 0.07 5.83 -28.11 -0.16 -0.09 16 18 C -0.28 0.19 5.44 -101.34 -0.55 -0.37 16 19 C -0.05 0.01 2.83 36.01 0.10 0.11 16 20 O -0.54 -0.86 12.54 -35.23 -0.44 -1.30 16 21 Si 0.66 -0.41 29.68 -169.99 -5.05 -5.45 16 22 C 0.14 -0.14 9.63 -16.08 -0.15 -0.29 16 23 N -0.73 0.61 5.46 -55.34 -0.30 0.31 16 24 C -0.14 0.46 7.01 -25.93 -0.18 0.28 16 25 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 26 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 27 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 28 H 0.07 0.00 8.13 -51.93 -0.42 -0.42 16 29 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 30 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 31 H 0.11 -0.10 7.39 -51.93 -0.38 -0.48 16 32 H 0.38 -2.47 7.30 45.56 0.33 -2.13 16 33 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 34 H 0.09 -0.12 7.94 -51.93 -0.41 -0.53 16 35 H 0.40 -2.69 7.03 -40.82 -0.29 -2.97 16 36 H 0.09 -0.38 8.14 -51.93 -0.42 -0.80 16 37 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 38 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 39 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 40 H 0.08 -0.02 7.83 -51.93 -0.41 -0.43 16 41 H 0.11 -0.07 7.96 -51.93 -0.41 -0.48 16 42 H 0.37 -0.33 8.70 45.56 0.40 0.06 16 43 H -0.26 -0.43 7.10 56.52 0.40 -0.02 16 44 H -0.26 -0.81 7.11 56.52 0.40 -0.41 16 45 H 0.13 -0.30 4.37 -52.48 -0.23 -0.52 16 46 H 0.41 -0.20 8.12 -40.82 -0.33 -0.53 16 47 H 0.10 -0.27 7.91 -51.93 -0.41 -0.68 16 48 H 0.09 -0.40 8.14 -51.93 -0.42 -0.82 16 LS Contribution 391.42 15.07 5.90 5.90 Total: 0.00 -10.05 391.42 -9.36 -19.42 By element: Atomic # 1 Polarization: -10.01 SS G_CDS: -6.84 Total: -16.85 kcal Atomic # 6 Polarization: 0.92 SS G_CDS: -1.23 Total: -0.31 kcal Atomic # 7 Polarization: 3.23 SS G_CDS: -0.62 Total: 2.61 kcal Atomic # 8 Polarization: -3.79 SS G_CDS: -1.52 Total: -5.31 kcal Atomic # 14 Polarization: -0.41 SS G_CDS: -5.05 Total: -5.45 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -10.05 -9.36 -19.42 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_15413834.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -130.796 kcal (2) G-P(sol) polarization free energy of solvation -10.053 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -140.849 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.363 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.416 kcal (6) G-S(sol) free energy of system = (1) + (5) -150.211 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds