Wall clock time and date at job start Sun Mar 7 2021 07:05:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45199 * 109.47075 * 2 1 4 4 C 1.34230 * 116.99614 * 179.97438 * 3 2 1 5 5 O 1.20824 * 120.00179 * 0.02562 * 4 3 2 6 6 C 1.50706 * 119.99717 * 179.97438 * 4 3 2 7 7 H 1.09001 * 112.84753 * 48.80875 * 6 4 3 8 8 C 1.53781 * 113.61278 * 179.97438 * 6 4 3 9 9 C 1.53780 * 87.07717 * 139.98407 * 8 6 4 10 10 O 1.42905 * 113.61426 * 89.20456 * 9 8 6 11 11 C 1.53003 * 113.61500 * 220.01686 * 9 8 6 12 12 N 1.46504 * 109.47293 * 179.97438 * 11 9 8 13 13 C 1.34774 * 120.00037 * 180.02562 * 12 11 9 14 14 O 1.21289 * 119.99863 * 0.02562 * 13 12 11 15 15 C 1.50699 * 120.00255 * 180.02562 * 13 12 11 16 16 C 1.53547 * 109.82002 * 278.20948 * 15 13 12 17 17 C 1.53034 * 108.55927 * 179.50865 * 16 15 13 18 18 C 1.50200 * 110.32106 * 49.57066 * 17 16 15 19 19 C 1.50706 * 118.55015 * 159.96471 * 18 17 16 20 20 O 1.42899 * 109.47151 * 299.98119 * 19 18 17 21 21 Si 1.86298 * 109.47086 * 179.97438 * 19 18 17 22 22 C 1.31117 * 122.90365 * 339.94893 * 18 17 16 23 23 N 1.38921 * 121.85107 * 0.39771 * 22 18 17 24 24 C 1.53773 * 87.08290 * 334.56800 * 9 8 6 25 25 H 1.09002 * 109.47153 * 300.00058 * 1 2 3 26 26 H 1.08998 * 109.47533 * 59.99688 * 1 2 3 27 27 H 1.08996 * 109.47853 * 180.02562 * 1 2 3 28 28 H 1.09002 * 109.47153 * 239.99942 * 2 1 3 29 29 H 1.09001 * 109.46832 * 120.00132 * 2 1 3 30 30 H 1.08998 * 113.61881 * 254.53186 * 8 6 4 31 31 H 1.09005 * 113.61420 * 25.35640 * 8 6 4 32 32 H 0.96702 * 113.99810 * 180.02562 * 10 9 8 33 33 H 1.08998 * 109.47708 * 300.00640 * 11 9 8 34 34 H 1.09006 * 109.46419 * 60.00261 * 11 9 8 35 35 H 0.97005 * 119.99551 * 0.02562 * 12 11 9 36 36 H 1.09003 * 109.81105 * 39.13058 * 15 13 12 37 37 H 1.09001 * 109.61835 * 299.22760 * 16 15 13 38 38 H 1.08995 * 109.62080 * 59.78220 * 16 15 13 39 39 H 1.08998 * 109.33343 * 289.30343 * 17 16 15 40 40 H 1.09007 * 109.32317 * 169.82970 * 17 16 15 41 41 H 1.09002 * 109.46546 * 59.98211 * 19 18 17 42 42 H 0.96704 * 113.99832 * 299.99745 * 20 19 18 43 43 H 1.48498 * 110.00322 * 58.68513 * 21 19 18 44 44 H 1.48496 * 109.99895 * 180.02562 * 21 19 18 45 45 H 1.08003 * 119.07376 * 180.43118 * 22 18 17 46 46 H 0.97000 * 120.56029 * 166.70684 * 23 22 18 47 47 H 1.09000 * 113.61689 * 270.87815 * 24 9 8 48 48 H 1.09007 * 113.61242 * 139.98164 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5447 0.0005 5 8 4.0807 0.5865 0.0005 6 6 3.9207 2.9374 0.0000 7 1 3.4708 3.5818 0.7553 8 6 5.4582 2.9680 0.0013 9 6 5.3573 4.1417 -0.9872 10 8 5.2839 5.4199 -0.3525 11 6 6.4005 4.0927 -2.1054 12 7 6.2224 5.2466 -2.9903 13 6 7.0344 5.4123 -4.0532 14 8 7.9122 4.6060 -4.2773 15 6 6.8516 6.5996 -4.9632 16 6 5.7275 6.3157 -5.9699 17 6 5.5583 7.5420 -6.8697 18 6 6.8893 7.9789 -7.4115 19 6 6.9158 8.8459 -8.6440 20 8 6.2917 8.1534 -9.7270 21 14 8.6818 9.2357 -9.0912 22 6 8.0292 7.6396 -6.8595 23 7 8.0852 6.8368 -5.7272 24 6 3.9875 3.5759 -1.3973 25 1 -0.3633 0.5138 0.8900 26 1 -0.3634 0.5139 -0.8899 27 1 -0.3635 -1.0276 0.0005 28 1 1.8933 -0.5138 -0.8900 29 1 1.8933 -0.5139 0.8900 30 1 5.8887 3.2437 0.9640 31 1 5.9132 2.0740 -0.4253 32 1 5.2199 6.1621 -0.9691 33 1 7.4000 4.1180 -1.6713 34 1 6.2762 3.1735 -2.6780 35 1 5.5200 5.8912 -2.8113 36 1 6.6065 7.4828 -4.3734 37 1 5.9901 5.4495 -6.5772 38 1 4.7975 6.1229 -5.4352 39 1 5.1192 8.3555 -6.2922 40 1 4.8956 7.2926 -7.6984 41 1 6.3777 9.7732 -8.4473 42 1 6.7189 7.3170 -9.9573 43 1 9.4345 7.9782 -9.3305 44 1 8.7215 10.0907 -10.3047 45 1 8.9505 7.9947 -7.2972 46 1 8.9240 6.4396 -5.4452 47 1 4.0403 2.8488 -2.2077 48 1 3.2306 4.3424 -1.5638 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_15413834.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:07 Heat of formation + Delta-G solvation = -154.771638 kcal Electronic energy + Delta-G solvation = -29973.805575 eV Core-core repulsion = 25610.580158 eV Total energy + Delta-G solvation = -4363.225417 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.176 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -42.17162 -41.42651 -40.43077 -39.42563 -37.79124 -37.48544 -36.05219 -35.41218 -33.16905 -33.09954 -32.68215 -29.90232 -27.58109 -26.96993 -26.08282 -25.23705 -23.87627 -23.50450 -21.96416 -21.83546 -20.78116 -19.63631 -19.31857 -18.82247 -18.28316 -17.79920 -17.60639 -17.37993 -17.22253 -16.62609 -16.49636 -16.28324 -16.04006 -15.75444 -15.30216 -15.20770 -15.16839 -14.82740 -14.69183 -14.34263 -14.19514 -14.02336 -13.87979 -13.78678 -13.52183 -13.26337 -13.13149 -12.99035 -12.89070 -12.77212 -12.57842 -12.36589 -12.28107 -11.88795 -11.78542 -11.71299 -11.59298 -11.47063 -11.22916 -10.97841 -10.87384 -10.36010 -10.29976 -8.43711 -4.91081 1.03264 1.31642 1.38080 1.50350 1.58535 1.59834 1.81135 2.00625 2.62932 2.85094 3.10271 3.33841 3.41557 3.45318 3.54034 3.61865 3.78120 3.89325 3.90043 3.94209 4.01733 4.07662 4.20575 4.29283 4.31978 4.34765 4.48379 4.57664 4.61854 4.65188 4.68001 4.70590 4.79271 4.82667 4.86238 4.87112 4.90253 5.07692 5.10057 5.12333 5.16854 5.24404 5.33231 5.40402 5.59690 6.20065 6.38624 6.61448 6.62171 6.64599 6.81583 7.04769 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.102 4.102 7 H 0.145 0.855 8 C -0.110 4.110 9 C 0.117 3.883 10 O -0.537 6.537 11 C 0.108 3.892 12 N -0.708 5.708 13 C 0.515 3.485 14 O -0.573 6.573 15 C 0.140 3.860 16 C -0.122 4.122 17 C -0.053 4.053 18 C -0.283 4.283 19 C -0.053 4.053 20 O -0.556 6.556 21 Si 0.741 3.259 22 C 0.141 3.859 23 N -0.737 5.737 24 C -0.135 4.135 25 H 0.069 0.931 26 H 0.070 0.930 27 H 0.095 0.905 28 H 0.067 0.933 29 H 0.066 0.934 30 H 0.092 0.908 31 H 0.102 0.898 32 H 0.394 0.606 33 H 0.070 0.930 34 H 0.074 0.926 35 H 0.418 0.582 36 H 0.123 0.877 37 H 0.050 0.950 38 H 0.103 0.897 39 H 0.084 0.916 40 H 0.066 0.934 41 H 0.116 0.884 42 H 0.381 0.619 43 H -0.295 1.295 44 H -0.313 1.313 45 H 0.142 0.858 46 H 0.407 0.593 47 H 0.094 0.906 48 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.522 4.371 3.738 7.316 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.313 3.687 5 O -0.430 6.430 6 C -0.121 4.121 7 H 0.163 0.837 8 C -0.148 4.148 9 C 0.075 3.925 10 O -0.346 6.346 11 C -0.017 4.017 12 N -0.363 5.363 13 C 0.301 3.699 14 O -0.452 6.452 15 C 0.031 3.969 16 C -0.160 4.160 17 C -0.091 4.091 18 C -0.293 4.293 19 C -0.164 4.164 20 O -0.363 6.363 21 Si 0.649 3.351 22 C 0.020 3.980 23 N -0.370 5.370 24 C -0.173 4.173 25 H 0.088 0.912 26 H 0.089 0.911 27 H 0.114 0.886 28 H 0.086 0.914 29 H 0.085 0.915 30 H 0.111 0.889 31 H 0.121 0.879 32 H 0.246 0.754 33 H 0.088 0.912 34 H 0.092 0.908 35 H 0.256 0.744 36 H 0.141 0.859 37 H 0.069 0.931 38 H 0.122 0.878 39 H 0.102 0.898 40 H 0.085 0.915 41 H 0.134 0.866 42 H 0.230 0.770 43 H -0.222 1.222 44 H -0.242 1.242 45 H 0.158 0.842 46 H 0.243 0.757 47 H 0.113 0.887 48 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -3.586 3.566 3.638 6.230 hybrid contribution -0.122 -1.194 -1.051 1.595 sum -3.708 2.372 2.586 5.105 Atomic orbital electron populations 1.21823 0.90627 1.04260 1.03801 1.23255 0.96990 0.79415 1.02416 1.86528 1.24296 1.33405 1.83378 1.24125 0.80529 0.93051 0.70952 1.90671 1.61179 1.44284 1.46848 1.22549 0.96933 0.89594 1.03005 0.83746 1.23080 0.93352 0.97081 1.01247 1.22041 0.93343 0.85353 0.91729 1.86603 1.96200 1.14629 1.37140 1.21847 0.99681 0.89630 0.90511 1.45633 1.35786 1.27904 1.26962 1.20935 0.80819 0.87006 0.81151 1.90754 1.35044 1.46231 1.73149 1.21161 0.87294 0.95861 0.92599 1.21847 0.97984 0.98787 0.97410 1.19953 0.94227 0.96563 0.98309 1.20932 0.95119 1.11282 1.01951 1.24801 1.08958 0.97213 0.85430 1.86534 1.57612 1.39464 1.52708 0.94775 0.75111 0.79806 0.85369 1.20475 0.97625 0.91905 0.87975 1.44393 1.09898 1.54393 1.28295 1.23662 0.98512 1.01120 0.94001 0.91228 0.91124 0.88627 0.91433 0.91540 0.88914 0.87940 0.75441 0.91157 0.90769 0.74374 0.85940 0.93093 0.87815 0.89794 0.91501 0.86633 0.77048 1.22219 1.24189 0.84166 0.75720 0.88745 0.86777 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.59 10.29 71.98 0.74 1.33 16 2 C 0.05 0.04 6.19 71.98 0.45 0.49 16 3 O -0.36 -1.05 10.22 -51.42 -0.53 -1.58 16 4 C 0.47 1.72 7.48 71.24 0.53 2.25 16 5 O -0.54 -5.49 15.65 21.97 0.34 -5.15 16 6 C -0.10 0.31 4.20 -11.01 -0.05 0.27 16 7 H 0.14 -0.78 8.14 -2.39 -0.02 -0.80 16 8 C -0.11 0.28 6.80 31.12 0.21 0.49 16 9 C 0.12 -0.81 1.49 -10.27 -0.02 -0.83 16 10 O -0.54 4.29 13.41 -148.98 -2.00 2.29 16 11 C 0.11 -0.51 5.32 86.38 0.46 -0.05 16 12 N -0.71 5.99 5.34 -463.04 -2.47 3.52 16 13 C 0.51 -1.00 7.08 87.66 0.62 -0.38 16 14 O -0.57 -4.65 16.10 -3.06 -0.05 -4.69 16 15 C 0.14 -0.78 3.36 44.33 0.15 -0.63 16 16 C -0.12 0.65 5.47 30.79 0.17 0.82 16 17 C -0.05 0.20 5.83 29.70 0.17 0.38 16 18 C -0.28 0.55 5.44 -16.76 -0.09 0.46 16 19 C -0.05 0.03 2.83 71.24 0.20 0.23 16 20 O -0.56 -1.97 12.54 -148.98 -1.87 -3.84 16 21 Si 0.74 -0.50 29.68 68.60 2.04 1.54 16 22 C 0.14 -0.33 9.63 83.41 0.80 0.47 16 23 N -0.74 1.50 5.46 -329.00 -1.80 -0.30 16 24 C -0.14 1.02 7.01 31.12 0.22 1.24 16 25 H 0.07 -0.28 8.14 -2.39 -0.02 -0.29 16 26 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 27 H 0.10 -0.64 8.14 -2.39 -0.02 -0.66 16 28 H 0.07 0.08 8.13 -2.39 -0.02 0.06 16 29 H 0.07 0.10 8.13 -2.39 -0.02 0.08 16 30 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 31 H 0.10 0.00 7.39 -2.38 -0.02 -0.02 16 32 H 0.39 -6.27 7.30 -74.06 -0.54 -6.81 16 33 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 34 H 0.07 -0.14 7.94 -2.38 -0.02 -0.16 16 35 H 0.42 -6.74 7.03 -92.70 -0.65 -7.39 16 36 H 0.12 -1.38 8.14 -2.39 -0.02 -1.40 16 37 H 0.05 0.01 8.14 -2.39 -0.02 -0.01 16 38 H 0.10 -1.08 8.14 -2.39 -0.02 -1.10 16 39 H 0.08 -0.57 8.14 -2.39 -0.02 -0.59 16 40 H 0.07 -0.07 7.83 -2.38 -0.02 -0.08 16 41 H 0.12 -0.24 7.96 -2.39 -0.02 -0.26 16 42 H 0.38 -0.40 8.70 -74.05 -0.64 -1.05 16 43 H -0.29 -1.25 7.10 99.48 0.71 -0.54 16 44 H -0.31 -2.54 7.11 99.48 0.71 -1.83 16 45 H 0.14 -0.65 4.37 -2.91 -0.01 -0.66 16 46 H 0.41 -0.26 8.12 -92.71 -0.75 -1.01 16 47 H 0.09 -0.58 7.91 -2.39 -0.02 -0.60 16 48 H 0.11 -1.32 8.14 -2.38 -0.02 -1.34 16 Total: 0.00 -25.50 391.42 -3.29 -28.79 By element: Atomic # 1 Polarization: -25.58 SS G_CDS: -1.53 Total: -27.11 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: 4.57 Total: 6.54 kcal Atomic # 7 Polarization: 7.49 SS G_CDS: -4.27 Total: 3.22 kcal Atomic # 8 Polarization: -8.88 SS G_CDS: -4.10 Total: -12.97 kcal Atomic # 14 Polarization: -0.50 SS G_CDS: 2.04 Total: 1.54 kcal Total: -25.50 -3.29 -28.79 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_15413834.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -125.982 kcal (2) G-P(sol) polarization free energy of solvation -25.498 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.480 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.292 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.790 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.772 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds