Wall clock time and date at job start Sun Mar 7 2021 07:05:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 O 1.45202 * 109.47028 * 2 1 4 4 C 1.34226 * 117.00062 * 180.02562 * 3 2 1 5 5 O 1.20826 * 120.00192 * 359.97438 * 4 3 2 6 6 C 1.50701 * 120.00175 * 180.02562 * 4 3 2 7 7 H 1.09000 * 112.90925 * 48.74115 * 6 4 3 8 8 C 1.53784 * 113.61605 * 179.97438 * 6 4 3 9 9 C 1.53787 * 87.07923 * 139.97671 * 8 6 4 10 10 O 1.42897 * 113.61125 * 89.20314 * 9 8 6 11 11 C 1.53003 * 113.61385 * 220.01697 * 9 8 6 12 12 N 1.46492 * 109.47000 * 180.02562 * 11 9 8 13 13 C 1.34777 * 120.00162 * 180.02562 * 12 11 9 14 14 O 1.21287 * 119.99721 * 359.97438 * 13 12 11 15 15 C 1.50696 * 120.00444 * 179.97438 * 13 12 11 16 16 C 1.53037 * 109.33190 * 180.02562 * 15 13 12 17 17 C 1.53543 * 108.56404 * 169.83227 * 16 15 13 18 18 N 1.47034 * 107.65624 * 299.05192 * 17 16 15 19 19 C 1.38919 * 118.88339 * 43.66070 * 18 17 16 20 20 C 1.31106 * 121.85350 * 346.68768 * 19 18 17 21 21 C 1.50698 * 118.55120 * 180.42657 * 20 19 18 22 22 O 1.42894 * 109.47353 * 249.98026 * 21 20 19 23 23 Si 1.86299 * 109.46845 * 9.97732 * 21 20 19 24 24 C 1.53778 * 87.08035 * 334.56830 * 9 8 6 25 25 H 1.09002 * 109.46889 * 180.02562 * 1 2 3 26 26 H 1.09007 * 109.47303 * 299.99487 * 1 2 3 27 27 H 1.09000 * 109.47631 * 59.99519 * 1 2 3 28 28 H 1.08998 * 109.47474 * 240.00607 * 2 1 3 29 29 H 1.09004 * 109.47569 * 119.99957 * 2 1 3 30 30 H 1.09004 * 113.61451 * 25.43157 * 8 6 4 31 31 H 1.08994 * 113.61477 * 254.52459 * 8 6 4 32 32 H 0.96699 * 113.99915 * 180.02562 * 10 9 8 33 33 H 1.08999 * 109.46701 * 300.00519 * 11 9 8 34 34 H 1.09006 * 109.46673 * 60.00149 * 11 9 8 35 35 H 0.97000 * 120.00048 * 359.97438 * 12 11 9 36 36 H 1.08998 * 109.32658 * 60.34609 * 15 13 12 37 37 H 1.09004 * 109.61996 * 289.55141 * 16 15 13 38 38 H 1.08999 * 109.62316 * 50.10737 * 16 15 13 39 39 H 1.09004 * 109.81799 * 58.58444 * 17 16 15 40 40 H 1.09000 * 109.82254 * 179.44634 * 17 16 15 41 41 H 0.96999 * 120.55387 * 223.64107 * 18 17 16 42 42 H 1.08004 * 119.07051 * 166.68633 * 19 18 17 43 43 H 1.09003 * 109.47564 * 129.97344 * 21 20 19 44 44 H 0.96700 * 114.00179 * 180.02562 * 22 21 20 45 45 H 1.48497 * 110.00043 * 299.99895 * 23 21 20 46 46 H 1.48506 * 110.00301 * 61.31901 * 23 21 20 47 47 H 1.08999 * 113.61111 * 139.98327 * 24 9 8 48 48 H 1.08999 * 113.61280 * 270.79710 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5449 -0.0005 5 8 4.0807 0.5867 -0.0005 6 6 3.9206 2.9375 0.0000 7 1 3.4713 3.5822 0.7554 8 6 5.4582 2.9682 -0.0001 9 6 5.3562 4.1429 -0.9873 10 8 5.2834 5.4204 -0.3512 11 6 6.3984 4.0951 -2.1065 12 7 6.2202 5.2505 -2.9893 13 6 7.0313 5.4176 -4.0526 14 8 7.9090 4.6116 -4.2783 15 6 6.8477 6.6059 -4.9611 16 6 7.8907 6.5542 -6.0798 17 6 7.5338 7.6157 -7.1302 18 7 6.2052 7.2842 -7.6656 19 6 5.2026 6.9016 -6.7835 20 6 5.4614 6.5804 -5.5390 21 6 4.3178 6.1669 -4.6491 22 8 4.0835 7.1824 -3.6715 23 14 2.7835 5.9307 -5.6791 24 6 3.9861 3.5775 -1.3967 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3634 0.5138 0.8901 27 1 -0.3634 0.5139 -0.8899 28 1 1.8933 -0.5137 -0.8900 29 1 1.8934 -0.5138 0.8900 30 1 5.9127 2.0753 -0.4294 31 1 5.8894 3.2429 0.9625 32 1 5.2188 6.1633 -0.9669 33 1 7.3982 4.1201 -1.6732 34 1 6.2737 3.1765 -2.6800 35 1 5.5180 5.8949 -2.8090 36 1 6.9792 7.5228 -4.3867 37 1 8.8785 6.7633 -5.6691 38 1 7.8845 5.5665 -6.5407 39 1 7.5098 8.6016 -6.6660 40 1 8.2707 7.6033 -7.9334 41 1 6.0316 7.3322 -8.6188 42 1 4.1811 6.8679 -7.1326 43 1 4.5668 5.2312 -4.1484 44 1 3.3594 6.9827 -3.0625 45 1 2.4332 7.1993 -6.3669 46 1 3.0035 4.8549 -6.6789 47 1 3.2290 4.3441 -1.5617 48 1 4.0380 2.8523 -2.2088 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_15608500.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:13 Heat of formation + Delta-G solvation = -138.592742 kcal Electronic energy + Delta-G solvation = -31606.487198 eV Core-core repulsion = 27243.963350 eV Total energy + Delta-G solvation = -4362.523848 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.176 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -42.16492 -41.50090 -40.38939 -39.14807 -37.92648 -37.58818 -35.97397 -35.26245 -33.65674 -32.94644 -32.69575 -29.78064 -27.48597 -27.05476 -26.57414 -25.27558 -23.75113 -23.27003 -21.91188 -21.77390 -20.82450 -19.59441 -18.99237 -18.76789 -18.62882 -18.15955 -17.68022 -17.50538 -17.36061 -16.96336 -16.62084 -16.31831 -15.86672 -15.36877 -15.26599 -15.20280 -14.88670 -14.88017 -14.67201 -14.43909 -14.16448 -13.92618 -13.82326 -13.73254 -13.62442 -13.57093 -13.19065 -12.95332 -12.91052 -12.75224 -12.59734 -12.34105 -12.30011 -11.98767 -11.82476 -11.73109 -11.51737 -11.50336 -11.40829 -10.97957 -10.75438 -10.50981 -9.91179 -8.62669 -5.07000 1.06824 1.18420 1.18996 1.54799 1.65007 1.74328 1.86996 2.14566 2.40797 2.72116 3.05454 3.28267 3.32207 3.39716 3.44507 3.54851 3.63232 3.89117 3.89931 3.95416 4.01206 4.06353 4.11757 4.16190 4.28527 4.29489 4.32247 4.35817 4.48037 4.49877 4.54024 4.62139 4.69496 4.72560 4.74311 4.78775 4.80316 4.86163 5.01733 5.03668 5.06546 5.21679 5.28207 5.35788 5.48539 6.12498 6.31504 6.43216 6.47438 6.65001 6.77471 7.25609 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.355 6.355 4 C 0.470 3.530 5 O -0.505 6.505 6 C -0.101 4.101 7 H 0.133 0.867 8 C -0.102 4.102 9 C 0.098 3.902 10 O -0.530 6.530 11 C 0.098 3.902 12 N -0.732 5.732 13 C 0.529 3.471 14 O -0.535 6.535 15 C -0.037 4.037 16 C -0.122 4.122 17 C 0.119 3.881 18 N -0.747 5.747 19 C 0.153 3.847 20 C -0.237 4.237 21 C -0.069 4.069 22 O -0.549 6.549 23 Si 0.668 3.332 24 C -0.147 4.147 25 H 0.081 0.919 26 H 0.067 0.933 27 H 0.068 0.932 28 H 0.070 0.930 29 H 0.070 0.930 30 H 0.114 0.886 31 H 0.094 0.906 32 H 0.379 0.621 33 H 0.081 0.919 34 H 0.083 0.917 35 H 0.405 0.595 36 H 0.101 0.899 37 H 0.084 0.916 38 H 0.081 0.919 39 H 0.064 0.936 40 H 0.085 0.915 41 H 0.404 0.596 42 H 0.125 0.875 43 H 0.079 0.921 44 H 0.377 0.623 45 H -0.251 1.251 46 H -0.256 1.256 47 H 0.093 0.907 48 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.414 2.560 -0.629 6.021 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.272 6.272 4 C 0.313 3.687 5 O -0.392 6.392 6 C -0.120 4.120 7 H 0.151 0.849 8 C -0.139 4.139 9 C 0.056 3.944 10 O -0.336 6.336 11 C -0.026 4.026 12 N -0.392 5.392 13 C 0.315 3.685 14 O -0.411 6.411 15 C -0.059 4.059 16 C -0.160 4.160 17 C -0.005 4.005 18 N -0.376 5.376 19 C 0.031 3.969 20 C -0.248 4.248 21 C -0.181 4.181 22 O -0.355 6.355 23 Si 0.571 3.429 24 C -0.185 4.185 25 H 0.099 0.901 26 H 0.086 0.914 27 H 0.087 0.913 28 H 0.089 0.911 29 H 0.089 0.911 30 H 0.132 0.868 31 H 0.112 0.888 32 H 0.228 0.772 33 H 0.099 0.901 34 H 0.101 0.899 35 H 0.245 0.755 36 H 0.119 0.881 37 H 0.102 0.898 38 H 0.099 0.901 39 H 0.083 0.917 40 H 0.104 0.896 41 H 0.238 0.762 42 H 0.142 0.858 43 H 0.097 0.903 44 H 0.224 0.776 45 H -0.176 1.176 46 H -0.181 1.181 47 H 0.111 0.889 48 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -4.279 1.643 -1.306 4.766 hybrid contribution -0.017 0.470 -0.673 0.821 sum -4.296 2.113 -1.979 5.180 Atomic orbital electron populations 1.21820 0.92318 1.03244 1.03674 1.23087 0.95618 0.79906 1.02744 1.86516 1.24350 1.32683 1.83680 1.23540 0.80697 0.92319 0.72156 1.90691 1.60526 1.42943 1.45066 1.22408 0.97249 0.90983 1.01376 0.84944 1.23068 0.93256 0.96693 1.00906 1.22363 0.93675 0.85502 0.92872 1.86587 1.96259 1.14374 1.36399 1.21953 0.99925 0.90112 0.90597 1.46425 1.36658 1.27883 1.28260 1.20519 0.80484 0.86844 0.80613 1.90723 1.33048 1.44938 1.72403 1.19701 0.93286 0.97033 0.95831 1.21760 0.98158 1.00642 0.95476 1.21683 0.83853 0.97665 0.97293 1.44569 1.10182 1.74681 1.08208 1.20274 0.91905 0.93958 0.90776 1.19575 0.93441 1.17031 0.94773 1.24814 1.03888 0.93356 0.96059 1.86534 1.57199 1.45190 1.46573 0.95401 0.83640 0.80704 0.83204 1.23707 0.98340 1.01058 0.95407 0.90063 0.91351 0.91324 0.91124 0.91114 0.86795 0.88767 0.77205 0.90094 0.89902 0.75466 0.88088 0.89783 0.90078 0.91743 0.89636 0.76199 0.85790 0.90332 0.77564 1.17647 1.18099 0.88852 0.88283 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.32 10.29 37.15 0.38 0.70 16 2 C 0.06 -0.01 6.19 37.15 0.23 0.22 16 3 O -0.36 -0.36 10.22 -39.25 -0.40 -0.77 16 4 C 0.47 0.68 7.48 36.01 0.27 0.94 16 5 O -0.50 -2.22 15.65 -18.75 -0.29 -2.51 16 6 C -0.10 0.13 4.20 -90.96 -0.38 -0.25 16 7 H 0.13 -0.29 8.14 -51.93 -0.42 -0.72 16 8 C -0.10 0.09 6.80 -25.91 -0.18 -0.09 16 9 C 0.10 -0.20 1.49 -89.80 -0.13 -0.33 16 10 O -0.53 0.97 13.41 -35.23 -0.47 0.50 16 11 C 0.10 -0.05 5.32 -4.04 -0.02 -0.07 16 12 N -0.73 0.43 3.64 -60.30 -0.22 0.21 16 13 C 0.53 1.31 6.85 -10.99 -0.08 1.23 16 14 O -0.54 -3.35 15.80 5.55 0.09 -3.27 16 15 C -0.04 -0.04 2.75 -93.14 -0.26 -0.30 16 16 C -0.12 -0.10 4.91 -26.43 -0.13 -0.23 16 17 C 0.12 -0.12 7.16 -3.47 -0.02 -0.14 16 18 N -0.75 0.33 5.83 -60.68 -0.35 -0.03 16 19 C 0.15 0.12 9.61 -16.08 -0.15 -0.03 16 20 C -0.24 -0.17 5.07 -101.33 -0.51 -0.68 16 21 C -0.07 0.12 1.68 36.00 0.06 0.18 16 22 O -0.55 1.79 11.38 -35.23 -0.40 1.39 16 23 Si 0.67 -1.35 29.92 -169.99 -5.09 -6.44 16 24 C -0.15 0.46 7.01 -25.92 -0.18 0.27 16 25 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 26 H 0.07 -0.14 8.14 -51.92 -0.42 -0.56 16 27 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 28 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 29 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 30 H 0.11 -0.02 7.39 -51.93 -0.38 -0.40 16 31 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.38 -1.68 7.30 45.56 0.33 -1.34 16 33 H 0.08 0.08 8.14 -51.93 -0.42 -0.35 16 34 H 0.08 0.01 7.94 -51.93 -0.41 -0.40 16 35 H 0.40 -1.10 3.55 -40.82 -0.14 -1.25 16 36 H 0.10 0.04 8.14 -51.93 -0.42 -0.38 16 37 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 38 H 0.08 0.23 7.77 -51.93 -0.40 -0.18 16 39 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 40 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 41 H 0.40 -0.92 8.96 -40.82 -0.37 -1.29 16 42 H 0.13 0.04 4.34 -52.48 -0.23 -0.18 16 43 H 0.08 -0.18 5.29 -51.93 -0.27 -0.45 16 44 H 0.38 -2.98 8.74 45.56 0.40 -2.58 16 45 H -0.25 -0.19 6.88 56.52 0.39 0.20 16 46 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 47 H 0.09 -0.49 8.14 -51.93 -0.42 -0.92 16 48 H 0.10 -0.28 7.92 -51.93 -0.41 -0.69 16 LS Contribution 381.65 15.07 5.75 5.75 Total: 0.00 -10.12 381.65 -9.09 -19.21 By element: Atomic # 1 Polarization: -8.90 SS G_CDS: -6.60 Total: -15.50 kcal Atomic # 6 Polarization: 2.54 SS G_CDS: -1.11 Total: 1.44 kcal Atomic # 7 Polarization: 0.76 SS G_CDS: -0.57 Total: 0.19 kcal Atomic # 8 Polarization: -3.17 SS G_CDS: -1.48 Total: -4.65 kcal Atomic # 14 Polarization: -1.35 SS G_CDS: -5.09 Total: -6.44 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -10.12 -9.09 -19.21 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_15608500.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -119.385 kcal (2) G-P(sol) polarization free energy of solvation -10.116 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.501 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.092 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.208 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.593 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds