Wall clock time and date at job start Sun Mar 7 2021 07:05:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 O 1.45202 * 109.47028 * 2 1 4 4 C 1.34226 * 117.00062 * 180.02562 * 3 2 1 5 5 O 1.20826 * 120.00192 * 359.97438 * 4 3 2 6 6 C 1.50701 * 120.00175 * 180.02562 * 4 3 2 7 7 H 1.09000 * 112.90925 * 48.74115 * 6 4 3 8 8 C 1.53784 * 113.61605 * 179.97438 * 6 4 3 9 9 C 1.53787 * 87.07923 * 139.97671 * 8 6 4 10 10 O 1.42897 * 113.61125 * 89.20314 * 9 8 6 11 11 C 1.53003 * 113.61385 * 220.01697 * 9 8 6 12 12 N 1.46492 * 109.47000 * 180.02562 * 11 9 8 13 13 C 1.34777 * 120.00162 * 180.02562 * 12 11 9 14 14 O 1.21287 * 119.99721 * 359.97438 * 13 12 11 15 15 C 1.50696 * 120.00444 * 179.97438 * 13 12 11 16 16 C 1.53037 * 109.33190 * 180.02562 * 15 13 12 17 17 C 1.53543 * 108.56404 * 169.83227 * 16 15 13 18 18 N 1.47034 * 107.65624 * 299.05192 * 17 16 15 19 19 C 1.38919 * 118.88339 * 43.66070 * 18 17 16 20 20 C 1.31106 * 121.85350 * 346.68768 * 19 18 17 21 21 C 1.50698 * 118.55120 * 180.42657 * 20 19 18 22 22 O 1.42894 * 109.47353 * 249.98026 * 21 20 19 23 23 Si 1.86299 * 109.46845 * 9.97732 * 21 20 19 24 24 C 1.53778 * 87.08035 * 334.56830 * 9 8 6 25 25 H 1.09002 * 109.46889 * 180.02562 * 1 2 3 26 26 H 1.09007 * 109.47303 * 299.99487 * 1 2 3 27 27 H 1.09000 * 109.47631 * 59.99519 * 1 2 3 28 28 H 1.08998 * 109.47474 * 240.00607 * 2 1 3 29 29 H 1.09004 * 109.47569 * 119.99957 * 2 1 3 30 30 H 1.09004 * 113.61451 * 25.43157 * 8 6 4 31 31 H 1.08994 * 113.61477 * 254.52459 * 8 6 4 32 32 H 0.96699 * 113.99915 * 180.02562 * 10 9 8 33 33 H 1.08999 * 109.46701 * 300.00519 * 11 9 8 34 34 H 1.09006 * 109.46673 * 60.00149 * 11 9 8 35 35 H 0.97000 * 120.00048 * 359.97438 * 12 11 9 36 36 H 1.08998 * 109.32658 * 60.34609 * 15 13 12 37 37 H 1.09004 * 109.61996 * 289.55141 * 16 15 13 38 38 H 1.08999 * 109.62316 * 50.10737 * 16 15 13 39 39 H 1.09004 * 109.81799 * 58.58444 * 17 16 15 40 40 H 1.09000 * 109.82254 * 179.44634 * 17 16 15 41 41 H 0.96999 * 120.55387 * 223.64107 * 18 17 16 42 42 H 1.08004 * 119.07051 * 166.68633 * 19 18 17 43 43 H 1.09003 * 109.47564 * 129.97344 * 21 20 19 44 44 H 0.96700 * 114.00179 * 180.02562 * 22 21 20 45 45 H 1.48497 * 110.00043 * 299.99895 * 23 21 20 46 46 H 1.48506 * 110.00301 * 61.31901 * 23 21 20 47 47 H 1.08999 * 113.61111 * 139.98327 * 24 9 8 48 48 H 1.08999 * 113.61280 * 270.79710 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5449 -0.0005 5 8 4.0807 0.5867 -0.0005 6 6 3.9206 2.9375 0.0000 7 1 3.4713 3.5822 0.7554 8 6 5.4582 2.9682 -0.0001 9 6 5.3562 4.1429 -0.9873 10 8 5.2834 5.4204 -0.3512 11 6 6.3984 4.0951 -2.1065 12 7 6.2202 5.2505 -2.9893 13 6 7.0313 5.4176 -4.0526 14 8 7.9090 4.6116 -4.2783 15 6 6.8477 6.6059 -4.9611 16 6 7.8907 6.5542 -6.0798 17 6 7.5338 7.6157 -7.1302 18 7 6.2052 7.2842 -7.6656 19 6 5.2026 6.9016 -6.7835 20 6 5.4614 6.5804 -5.5390 21 6 4.3178 6.1669 -4.6491 22 8 4.0835 7.1824 -3.6715 23 14 2.7835 5.9307 -5.6791 24 6 3.9861 3.5775 -1.3967 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3634 0.5138 0.8901 27 1 -0.3634 0.5139 -0.8899 28 1 1.8933 -0.5137 -0.8900 29 1 1.8934 -0.5138 0.8900 30 1 5.9127 2.0753 -0.4294 31 1 5.8894 3.2429 0.9625 32 1 5.2188 6.1633 -0.9669 33 1 7.3982 4.1201 -1.6732 34 1 6.2737 3.1765 -2.6800 35 1 5.5180 5.8949 -2.8090 36 1 6.9792 7.5228 -4.3867 37 1 8.8785 6.7633 -5.6691 38 1 7.8845 5.5665 -6.5407 39 1 7.5098 8.6016 -6.6660 40 1 8.2707 7.6033 -7.9334 41 1 6.0316 7.3322 -8.6188 42 1 4.1811 6.8679 -7.1326 43 1 4.5668 5.2312 -4.1484 44 1 3.3594 6.9827 -3.0625 45 1 2.4332 7.1993 -6.3669 46 1 3.0035 4.8549 -6.6789 47 1 3.2290 4.3441 -1.5617 48 1 4.0380 2.8523 -2.2088 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_15608500.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:12 Heat of formation + Delta-G solvation = -142.562595 kcal Electronic energy + Delta-G solvation = -31606.659343 eV Core-core repulsion = 27243.963350 eV Total energy + Delta-G solvation = -4362.695993 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.176 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.17438 -41.59293 -40.36612 -39.23164 -37.81066 -37.62843 -35.92050 -35.29676 -33.66143 -32.93520 -32.62377 -29.77638 -27.44878 -26.90590 -26.53324 -25.26539 -23.68873 -23.25904 -21.96901 -21.84843 -20.72402 -19.61347 -18.96629 -18.77345 -18.57078 -18.05435 -17.73564 -17.56708 -17.31777 -16.93245 -16.66870 -16.24497 -15.87030 -15.34193 -15.24366 -15.14133 -14.90338 -14.83240 -14.67194 -14.41738 -14.12467 -13.85987 -13.76152 -13.71798 -13.62524 -13.44980 -13.20077 -12.92548 -12.88435 -12.71358 -12.51562 -12.35342 -12.21608 -12.00446 -11.76410 -11.71147 -11.53190 -11.51784 -11.39739 -10.95517 -10.84531 -10.44679 -9.91361 -8.60921 -4.94129 1.04910 1.10450 1.30956 1.58722 1.65122 1.66073 1.96586 2.10747 2.48393 2.88710 3.16366 3.40527 3.42796 3.48052 3.53274 3.58215 3.68978 3.93508 3.96552 4.00349 4.08136 4.10584 4.15133 4.25566 4.27422 4.34799 4.35522 4.46501 4.56241 4.64471 4.66325 4.70055 4.73948 4.75377 4.85347 4.93442 4.93540 4.95489 5.05738 5.15307 5.16398 5.18446 5.27813 5.30776 5.46967 6.14267 6.37256 6.63888 6.69461 6.75394 6.97916 7.14809 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.356 6.356 4 C 0.470 3.530 5 O -0.542 6.542 6 C -0.098 4.098 7 H 0.148 0.852 8 C -0.111 4.111 9 C 0.112 3.888 10 O -0.536 6.536 11 C 0.099 3.901 12 N -0.714 5.714 13 C 0.525 3.475 14 O -0.580 6.580 15 C -0.035 4.035 16 C -0.122 4.122 17 C 0.122 3.878 18 N -0.748 5.748 19 C 0.139 3.861 20 C -0.252 4.252 21 C -0.069 4.069 22 O -0.554 6.554 23 Si 0.755 3.245 24 C -0.138 4.138 25 H 0.093 0.907 26 H 0.069 0.931 27 H 0.072 0.928 28 H 0.067 0.933 29 H 0.064 0.936 30 H 0.101 0.899 31 H 0.091 0.909 32 H 0.391 0.609 33 H 0.064 0.936 34 H 0.075 0.925 35 H 0.417 0.583 36 H 0.110 0.890 37 H 0.084 0.916 38 H 0.056 0.944 39 H 0.071 0.929 40 H 0.102 0.898 41 H 0.411 0.589 42 H 0.124 0.876 43 H 0.085 0.915 44 H 0.401 0.599 45 H -0.288 1.288 46 H -0.304 1.304 47 H 0.127 0.873 48 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.907 3.937 -0.134 7.952 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.272 6.272 4 C 0.314 3.686 5 O -0.432 6.432 6 C -0.116 4.116 7 H 0.166 0.834 8 C -0.149 4.149 9 C 0.070 3.930 10 O -0.344 6.344 11 C -0.025 4.025 12 N -0.374 5.374 13 C 0.312 3.688 14 O -0.460 6.460 15 C -0.056 4.056 16 C -0.161 4.161 17 C -0.002 4.002 18 N -0.379 5.379 19 C 0.017 3.983 20 C -0.263 4.263 21 C -0.180 4.180 22 O -0.363 6.363 23 Si 0.663 3.337 24 C -0.176 4.176 25 H 0.111 0.889 26 H 0.088 0.912 27 H 0.091 0.909 28 H 0.085 0.915 29 H 0.082 0.918 30 H 0.119 0.881 31 H 0.109 0.891 32 H 0.242 0.758 33 H 0.082 0.918 34 H 0.094 0.906 35 H 0.260 0.740 36 H 0.128 0.872 37 H 0.102 0.898 38 H 0.075 0.925 39 H 0.089 0.911 40 H 0.121 0.879 41 H 0.247 0.753 42 H 0.141 0.859 43 H 0.102 0.898 44 H 0.252 0.748 45 H -0.216 1.216 46 H -0.232 1.232 47 H 0.145 0.855 48 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -5.827 3.057 -0.768 6.625 hybrid contribution 0.445 0.032 -0.839 0.950 sum -5.382 3.089 -1.606 6.410 Atomic orbital electron populations 1.21819 0.90579 1.04154 1.03924 1.23242 0.97004 0.79516 1.02310 1.86525 1.24130 1.33226 1.83351 1.24109 0.80566 0.92988 0.70909 1.90676 1.61255 1.44354 1.46913 1.22510 0.96457 0.89616 1.03061 0.83401 1.23088 0.93860 0.96884 1.01050 1.22109 0.93797 0.85385 0.91684 1.86576 1.96233 1.14618 1.37014 1.21924 0.99810 0.89823 0.90935 1.46287 1.36086 1.27832 1.27164 1.20847 0.80086 0.86733 0.81124 1.90702 1.35068 1.46562 1.73637 1.19705 0.93673 0.96572 0.95680 1.21726 0.98377 0.99968 0.95989 1.21726 0.83973 0.97097 0.97386 1.44644 1.10138 1.74471 1.08626 1.20424 0.92292 0.94477 0.91151 1.19852 0.94007 1.17103 0.95337 1.24751 1.02998 0.93803 0.96472 1.86492 1.58599 1.44601 1.46625 0.94578 0.81723 0.76282 0.81131 1.23741 0.98228 1.01473 0.94153 0.88857 0.91230 0.90856 0.91466 0.91763 0.88096 0.89084 0.75759 0.91765 0.90632 0.73967 0.87187 0.89774 0.92478 0.91109 0.87937 0.75315 0.85880 0.89767 0.74795 1.21629 1.23181 0.85458 0.88454 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.70 10.29 71.98 0.74 1.44 16 2 C 0.05 0.01 6.19 71.98 0.45 0.45 16 3 O -0.36 -0.67 10.22 -51.38 -0.53 -1.19 16 4 C 0.47 1.49 7.48 71.24 0.53 2.03 16 5 O -0.54 -5.52 15.65 21.96 0.34 -5.17 16 6 C -0.10 0.33 4.20 -11.01 -0.05 0.28 16 7 H 0.15 -0.92 8.14 -2.39 -0.02 -0.94 16 8 C -0.11 0.15 6.80 31.12 0.21 0.36 16 9 C 0.11 -0.54 1.49 -10.27 -0.02 -0.55 16 10 O -0.54 2.93 13.41 -148.98 -2.00 0.93 16 11 C 0.10 -0.05 5.32 86.38 0.46 0.41 16 12 N -0.71 1.02 3.64 -463.06 -1.69 -0.66 16 13 C 0.52 2.97 6.85 87.66 0.60 3.57 16 14 O -0.58 -8.35 15.80 -3.05 -0.05 -8.40 16 15 C -0.04 -0.08 2.75 -12.43 -0.03 -0.12 16 16 C -0.12 -0.32 4.91 30.79 0.15 -0.17 16 17 C 0.12 -0.24 7.16 86.46 0.62 0.38 16 18 N -0.75 0.48 5.83 -345.89 -2.02 -1.54 16 19 C 0.14 0.26 9.61 83.42 0.80 1.07 16 20 C -0.25 -0.34 5.07 -16.75 -0.08 -0.43 16 21 C -0.07 0.31 1.68 71.24 0.12 0.43 16 22 O -0.55 4.91 11.38 -148.98 -1.69 3.22 16 23 Si 0.76 -3.37 29.92 68.60 2.05 -1.32 16 24 C -0.14 1.08 7.01 31.12 0.22 1.30 16 25 H 0.09 -0.66 8.14 -2.39 -0.02 -0.68 16 26 H 0.07 -0.33 8.14 -2.38 -0.02 -0.35 16 27 H 0.07 -0.40 8.14 -2.39 -0.02 -0.42 16 28 H 0.07 0.04 8.13 -2.39 -0.02 0.02 16 29 H 0.06 0.08 8.13 -2.39 -0.02 0.06 16 30 H 0.10 0.14 7.39 -2.39 -0.02 0.12 16 31 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 32 H 0.39 -4.43 7.30 -74.06 -0.54 -4.97 16 33 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 34 H 0.08 0.11 7.94 -2.38 -0.02 0.09 16 35 H 0.42 -2.88 3.55 -92.71 -0.33 -3.21 16 36 H 0.11 0.04 8.14 -2.39 -0.02 0.02 16 37 H 0.08 0.18 8.14 -2.38 -0.02 0.16 16 38 H 0.06 0.43 7.77 -2.39 -0.02 0.42 16 39 H 0.07 -0.21 8.14 -2.38 -0.02 -0.23 16 40 H 0.10 -0.57 8.14 -2.39 -0.02 -0.59 16 41 H 0.41 -1.78 8.96 -92.71 -0.83 -2.61 16 42 H 0.12 0.17 4.34 -2.91 -0.01 0.15 16 43 H 0.08 -0.50 5.29 -2.39 -0.01 -0.51 16 44 H 0.40 -7.75 8.74 -74.06 -0.65 -8.40 16 45 H -0.29 -0.49 6.88 99.48 0.68 0.19 16 46 H -0.30 -1.04 7.11 99.48 0.71 -0.33 16 47 H 0.13 -1.82 8.14 -2.39 -0.02 -1.84 16 48 H 0.10 -0.65 7.92 -2.39 -0.02 -0.67 16 Total: 0.00 -25.92 381.65 -2.16 -28.08 By element: Atomic # 1 Polarization: -23.09 SS G_CDS: -1.31 Total: -24.40 kcal Atomic # 6 Polarization: 5.73 SS G_CDS: 4.72 Total: 10.45 kcal Atomic # 7 Polarization: 1.50 SS G_CDS: -3.70 Total: -2.20 kcal Atomic # 8 Polarization: -6.69 SS G_CDS: -3.92 Total: -10.61 kcal Atomic # 14 Polarization: -3.37 SS G_CDS: 2.05 Total: -1.32 kcal Total: -25.92 -2.16 -28.08 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_15608500.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.479 kcal (2) G-P(sol) polarization free energy of solvation -25.923 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -140.403 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.160 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.083 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.563 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds