Wall clock time and date at job start Sun Mar 7 2021 07:05:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.45200 * 109.47003 * 2 1 4 4 C 1.34222 * 117.00094 * 180.02562 * 3 2 1 5 5 O 1.20821 * 120.00135 * 359.97438 * 4 3 2 6 6 C 1.50703 * 119.99985 * 179.97438 * 4 3 2 7 7 H 1.09003 * 112.85144 * 50.33478 * 6 4 3 8 8 C 1.53781 * 113.61471 * 181.52451 * 6 4 3 9 9 C 1.53781 * 87.08102 * 139.98239 * 8 6 4 10 10 O 1.42902 * 113.61140 * 89.19958 * 9 8 6 11 11 C 1.53002 * 113.61707 * 220.02057 * 9 8 6 12 12 N 1.46499 * 109.47269 * 180.02562 * 11 9 8 13 13 C 1.34774 * 119.99955 * 180.02562 * 12 11 9 14 14 O 1.21627 * 120.00218 * 359.97438 * 13 12 11 15 15 C 1.47263 * 120.00037 * 179.97438 * 13 12 11 16 16 C 1.36336 * 126.96995 * 179.70330 * 15 13 12 17 17 C 1.50996 * 126.78813 * 0.63539 * 16 15 13 18 18 C 1.53404 * 108.30011 * 163.94741 * 17 16 15 19 19 C 1.53154 * 109.04059 * 48.28502 * 18 17 16 20 20 C 1.53128 * 109.53039 * 290.42984 * 19 18 17 21 21 N 1.35216 * 108.66169 * 179.97438 * 16 15 13 22 22 C 1.36424 * 109.89577 * 0.35570 * 21 16 15 23 23 C 1.50708 * 125.49208 * 179.82533 * 22 21 16 24 24 O 1.42899 * 109.46556 * 329.97888 * 23 22 21 25 25 Si 1.86301 * 109.46914 * 209.98455 * 23 22 21 26 26 C 1.34497 * 109.01589 * 359.78795 * 22 21 16 27 27 C 1.53780 * 113.61796 * 279.13331 * 6 4 3 28 28 H 1.09001 * 109.46801 * 60.00026 * 1 2 3 29 29 H 1.09001 * 109.46998 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47050 * 299.99913 * 1 2 3 31 31 H 1.08993 * 109.46955 * 120.00258 * 2 1 3 32 32 H 1.09000 * 109.47050 * 240.00087 * 2 1 3 33 33 H 1.09001 * 113.61910 * 254.52936 * 8 6 4 34 34 H 1.08998 * 113.61338 * 25.35279 * 8 6 4 35 35 H 0.96699 * 113.99535 * 179.97438 * 10 9 8 36 36 H 1.09000 * 109.46861 * 300.00094 * 11 9 8 37 37 H 1.09000 * 109.46869 * 60.00069 * 11 9 8 38 38 H 0.96998 * 120.00031 * 359.97438 * 12 11 9 39 39 H 1.09001 * 109.84823 * 44.14794 * 17 16 15 40 40 H 1.09002 * 109.51772 * 283.55504 * 17 16 15 41 41 H 1.08998 * 109.54147 * 288.41511 * 18 17 16 42 42 H 1.09001 * 109.53716 * 168.15268 * 18 17 16 43 43 H 1.08996 * 109.46427 * 170.40725 * 19 18 17 44 44 H 1.09003 * 109.45950 * 50.44524 * 19 18 17 45 45 H 1.08997 * 109.56302 * 291.14290 * 20 19 18 46 46 H 1.08998 * 109.56330 * 170.80822 * 20 19 18 47 47 H 1.08994 * 109.47052 * 89.98150 * 23 22 21 48 48 H 0.96697 * 114.00647 * 300.00093 * 24 23 22 49 49 H 1.48492 * 110.00154 * 58.67556 * 25 23 22 50 50 H 1.48501 * 109.99698 * 179.97438 * 25 23 22 51 51 H 1.07995 * 126.81991 * 180.02562 * 26 22 21 52 52 H 1.08999 * 113.61058 * 334.56889 * 27 6 4 53 53 H 1.08999 * 113.61186 * 105.46725 * 27 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0807 0.5868 -0.0005 6 6 3.9206 2.9375 -0.0012 7 1 3.4902 3.5739 0.7721 8 6 5.4577 2.9684 -0.0392 9 6 5.3314 4.1525 -1.0123 10 8 5.2745 5.4239 -0.3624 11 6 6.3453 4.1155 -2.1575 12 7 6.1453 5.2793 -3.0246 13 6 6.9297 5.4566 -4.1061 14 8 7.8039 4.6507 -4.3621 15 6 6.7284 6.6262 -4.9780 16 6 7.4379 6.9463 -6.0973 17 6 8.5805 6.1633 -6.6983 18 6 8.8015 6.6584 -8.1334 19 6 8.8499 8.1892 -8.1319 20 6 7.4567 8.7452 -7.8241 21 7 6.9416 8.0947 -6.6105 22 6 5.9127 8.5432 -5.8350 23 6 5.1111 9.7951 -6.0833 24 8 5.9318 10.7637 -6.7392 25 14 4.5159 10.4839 -4.4579 26 6 5.7283 7.6876 -4.8138 27 6 3.9489 3.5919 -1.3925 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 1.8933 -0.5138 0.8899 32 1 1.8934 -0.5138 -0.8900 33 1 5.9129 3.2340 0.9149 34 1 5.9013 2.0791 -0.4869 35 1 5.1954 6.1726 -0.9692 36 1 7.3556 4.1365 -1.7491 37 1 6.2062 3.2025 -2.7365 38 1 5.4479 5.9219 -2.8207 39 1 8.3358 5.1012 -6.7096 40 1 9.4834 6.3269 -6.1099 41 1 7.9810 6.3202 -8.7661 42 1 9.7437 6.2641 -8.5140 43 1 9.1742 8.5432 -9.1104 44 1 9.5529 8.5295 -7.3715 45 1 6.7888 8.5399 -8.6606 46 1 7.5208 9.8211 -7.6617 47 1 4.2539 9.5586 -6.7135 48 1 6.7153 11.0219 -6.2347 49 1 5.6742 10.7805 -3.5773 50 1 3.7246 11.7190 -4.6890 51 1 4.9905 7.7659 -4.0291 52 1 3.9793 2.8739 -2.2121 53 1 3.1877 4.3600 -1.5292 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_16915396.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:16 Heat of formation + Delta-G solvation = -133.754570 kcal Electronic energy + Delta-G solvation = -35583.058462 eV Core-core repulsion = 30808.754513 eV Total energy + Delta-G solvation = -4774.303949 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.192 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -42.79097 -42.06459 -40.76336 -39.76229 -38.08565 -37.72744 -36.90622 -35.91958 -35.19142 -33.50380 -32.65188 -31.17730 -30.33453 -28.90394 -26.97140 -26.68559 -26.04471 -24.67175 -23.99907 -23.39619 -21.88754 -21.75575 -21.18376 -20.71010 -19.82024 -19.15190 -18.74713 -17.83230 -17.74396 -17.38222 -17.30865 -16.92182 -16.67038 -16.52838 -16.19572 -15.98687 -15.94922 -15.36168 -15.25096 -15.19228 -15.09097 -14.87989 -14.71347 -14.59323 -14.34586 -14.20361 -14.05586 -13.82939 -13.75513 -13.45818 -13.21590 -13.18215 -12.94307 -12.80550 -12.70490 -12.53866 -12.40289 -12.21621 -12.15372 -12.01090 -11.83159 -11.75122 -11.68099 -11.55151 -11.40866 -10.94634 -10.84091 -10.82380 -10.17846 -9.55272 -9.03717 -4.87874 0.71621 1.08377 1.08508 1.46028 1.63922 1.71799 1.80509 2.05780 2.32769 2.54227 2.92492 3.17260 3.20397 3.44733 3.47664 3.50692 3.54467 3.58900 3.68490 3.77755 3.80862 3.95828 3.97921 4.05602 4.16117 4.27415 4.30594 4.32937 4.36645 4.38662 4.41029 4.54107 4.63524 4.64266 4.71565 4.74158 4.75549 4.77185 4.82427 4.83927 4.90647 4.93181 4.95522 4.96518 5.00043 5.14099 5.15875 5.18461 5.19225 5.39140 5.44432 5.75007 6.02901 6.21650 6.35596 6.58092 6.67050 6.73210 7.33051 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.541 6.541 6 C -0.100 4.100 7 H 0.147 0.853 8 C -0.109 4.109 9 C 0.116 3.884 10 O -0.538 6.538 11 C 0.110 3.890 12 N -0.711 5.711 13 C 0.591 3.409 14 O -0.589 6.589 15 C -0.255 4.255 16 C 0.101 3.899 17 C -0.054 4.054 18 C -0.125 4.125 19 C -0.134 4.134 20 C 0.095 3.905 21 N -0.428 5.428 22 C -0.019 4.019 23 C -0.058 4.058 24 O -0.546 6.546 25 Si 0.808 3.192 26 C -0.157 4.157 27 C -0.134 4.134 28 H 0.070 0.930 29 H 0.095 0.905 30 H 0.069 0.931 31 H 0.066 0.934 32 H 0.067 0.933 33 H 0.092 0.908 34 H 0.101 0.899 35 H 0.394 0.606 36 H 0.065 0.935 37 H 0.072 0.928 38 H 0.413 0.587 39 H 0.080 0.920 40 H 0.079 0.921 41 H 0.066 0.934 42 H 0.087 0.913 43 H 0.106 0.894 44 H 0.071 0.929 45 H 0.084 0.916 46 H 0.113 0.887 47 H 0.130 0.870 48 H 0.385 0.615 49 H -0.289 1.289 50 H -0.300 1.300 51 H 0.190 0.810 52 H 0.093 0.907 53 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.213 4.636 -1.377 7.111 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.275 6.275 4 C 0.314 3.686 5 O -0.430 6.430 6 C -0.119 4.119 7 H 0.164 0.836 8 C -0.147 4.147 9 C 0.074 3.926 10 O -0.346 6.346 11 C -0.014 4.014 12 N -0.365 5.365 13 C 0.382 3.618 14 O -0.471 6.471 15 C -0.265 4.265 16 C -0.018 4.018 17 C -0.092 4.092 18 C -0.162 4.162 19 C -0.172 4.172 20 C -0.024 4.024 21 N -0.105 5.105 22 C -0.127 4.127 23 C -0.166 4.166 24 O -0.354 6.354 25 Si 0.711 3.289 26 C -0.180 4.180 27 C -0.172 4.172 28 H 0.089 0.911 29 H 0.113 0.887 30 H 0.088 0.912 31 H 0.084 0.916 32 H 0.085 0.915 33 H 0.110 0.890 34 H 0.120 0.880 35 H 0.245 0.755 36 H 0.083 0.917 37 H 0.091 0.909 38 H 0.251 0.749 39 H 0.099 0.901 40 H 0.097 0.903 41 H 0.085 0.915 42 H 0.106 0.894 43 H 0.124 0.876 44 H 0.089 0.911 45 H 0.102 0.898 46 H 0.130 0.870 47 H 0.147 0.853 48 H 0.235 0.765 49 H -0.216 1.216 50 H -0.228 1.228 51 H 0.207 0.793 52 H 0.111 0.889 53 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -4.733 4.212 -1.238 6.456 hybrid contribution 1.013 0.409 -0.804 1.356 sum -3.720 4.621 -2.042 6.274 Atomic orbital electron populations 1.21823 0.90607 1.04225 1.03820 1.23253 0.97000 0.79466 1.02382 1.86526 1.24254 1.33344 1.83387 1.24121 0.80529 0.93030 0.70914 1.90669 1.61197 1.44302 1.46882 1.22543 0.96767 0.89514 1.03065 0.83583 1.23067 0.93548 0.96896 1.01185 1.22099 0.93595 0.85477 0.91407 1.86570 1.96141 1.14733 1.37149 1.21793 0.99556 0.89393 0.90646 1.45418 1.37282 1.27323 1.26508 1.17541 0.80163 0.84006 0.80106 1.90764 1.35467 1.47160 1.73682 1.19910 1.05254 1.00360 1.00931 1.20558 0.97822 0.88544 0.94826 1.20429 0.94200 0.98699 0.95896 1.21699 1.03531 0.95665 0.95344 1.21923 0.95186 0.95671 1.04374 1.22422 0.96007 0.99246 0.84755 1.44040 1.26211 1.18477 1.21722 1.20996 0.95674 1.00632 0.95406 1.25108 0.95097 0.85017 1.11366 1.86568 1.40580 1.60439 1.47773 0.93514 0.80963 0.81708 0.72732 1.22039 1.01364 0.93985 1.00655 1.23684 0.98440 1.01041 0.94036 0.91100 0.88669 0.91204 0.91574 0.91480 0.88954 0.88034 0.75469 0.91683 0.90925 0.74878 0.90126 0.90312 0.91528 0.89404 0.87581 0.91062 0.89766 0.86952 0.85289 0.76499 1.21577 1.22797 0.79308 0.88872 0.86559 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.52 10.29 71.98 0.74 1.26 16 2 C 0.05 0.08 6.19 71.98 0.45 0.52 16 3 O -0.36 -1.33 10.22 -51.34 -0.52 -1.85 16 4 C 0.47 2.25 7.48 71.24 0.53 2.78 16 5 O -0.54 -6.14 15.66 21.98 0.34 -5.80 16 6 C -0.10 0.16 4.19 -11.01 -0.05 0.11 16 7 H 0.15 -0.63 8.14 -2.39 -0.02 -0.65 16 8 C -0.11 0.05 6.79 31.12 0.21 0.27 16 9 C 0.12 -0.47 1.49 -10.21 -0.02 -0.48 16 10 O -0.54 2.82 13.41 -148.98 -2.00 0.83 16 11 C 0.11 -0.04 5.33 86.38 0.46 0.42 16 12 N -0.71 1.40 5.33 -466.53 -2.49 -1.09 16 13 C 0.59 3.61 7.81 86.62 0.68 4.28 16 14 O -0.59 -8.49 15.34 -4.12 -0.06 -8.56 16 15 C -0.25 -0.92 6.28 -19.12 -0.12 -1.04 16 16 C 0.10 0.43 6.57 41.69 0.27 0.71 16 17 C -0.05 -0.21 5.32 30.08 0.16 -0.05 16 18 C -0.12 0.19 5.98 30.78 0.18 0.37 16 19 C -0.13 0.58 5.92 30.69 0.18 0.76 16 20 C 0.10 -0.31 6.22 86.32 0.54 0.23 16 21 N -0.43 -0.20 3.11 -493.63 -1.54 -1.73 16 22 C -0.02 0.04 6.15 40.99 0.25 0.29 16 23 C -0.06 0.29 3.00 71.24 0.21 0.51 16 24 O -0.55 1.71 10.28 -148.98 -1.53 0.18 16 25 Si 0.81 -5.52 31.11 68.60 2.13 -3.38 16 26 C -0.16 0.52 9.09 23.64 0.21 0.73 16 27 C -0.13 0.73 7.03 31.18 0.22 0.95 16 28 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 29 H 0.09 -0.59 8.14 -2.39 -0.02 -0.61 16 30 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 31 H 0.07 0.14 8.13 -2.39 -0.02 0.12 16 32 H 0.07 0.13 8.13 -2.39 -0.02 0.11 16 33 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 34 H 0.10 0.21 7.41 -2.39 -0.02 0.19 16 35 H 0.39 -4.99 7.30 -74.06 -0.54 -5.53 16 36 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 37 H 0.07 0.15 7.95 -2.39 -0.02 0.13 16 38 H 0.41 -3.97 6.16 -92.71 -0.57 -4.54 16 39 H 0.08 0.61 7.40 -2.39 -0.02 0.59 16 40 H 0.08 0.39 8.14 -2.39 -0.02 0.37 16 41 H 0.07 -0.06 8.12 -2.39 -0.02 -0.08 16 42 H 0.09 -0.28 8.14 -2.39 -0.02 -0.30 16 43 H 0.11 -0.81 8.14 -2.39 -0.02 -0.83 16 44 H 0.07 -0.24 8.11 -2.39 -0.02 -0.25 16 45 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 46 H 0.11 -0.59 5.68 -2.39 -0.01 -0.60 16 47 H 0.13 -0.85 7.96 -2.39 -0.02 -0.86 16 48 H 0.39 -2.88 8.27 -74.06 -0.61 -3.49 16 49 H -0.29 0.32 7.11 99.48 0.71 1.03 16 50 H -0.30 -0.27 7.11 99.48 0.71 0.44 16 51 H 0.19 -2.34 6.52 -2.91 -0.02 -2.36 16 52 H 0.09 -0.36 7.92 -2.39 -0.02 -0.37 16 53 H 0.12 -1.14 8.14 -2.39 -0.02 -1.16 16 Total: 0.00 -26.90 424.42 -1.27 -28.16 By element: Atomic # 1 Polarization: -18.65 SS G_CDS: -0.73 Total: -19.37 kcal Atomic # 6 Polarization: 7.50 SS G_CDS: 5.12 Total: 12.62 kcal Atomic # 7 Polarization: 1.20 SS G_CDS: -4.02 Total: -2.82 kcal Atomic # 8 Polarization: -11.43 SS G_CDS: -3.77 Total: -15.21 kcal Atomic # 14 Polarization: -5.52 SS G_CDS: 2.13 Total: -3.38 kcal Total: -26.90 -1.27 -28.16 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_16915396.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.591 kcal (2) G-P(sol) polarization free energy of solvation -26.896 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.487 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.268 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.163 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.755 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds