Wall clock time and date at job start Sun Mar 7 2021 07:05:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 O 1.45197 * 109.47236 * 2 1 4 4 C 1.34236 * 116.99804 * 180.02562 * 3 2 1 5 5 O 1.20826 * 119.99757 * 359.97438 * 4 3 2 6 6 C 1.50697 * 120.00027 * 180.02562 * 4 3 2 7 7 H 1.09000 * 112.84827 * 311.19224 * 6 4 3 8 8 C 1.53777 * 113.61765 * 82.50139 * 6 4 3 9 9 C 1.53781 * 87.08306 * 139.98426 * 8 6 4 10 10 O 1.42895 * 113.69549 * 89.12530 * 9 8 6 11 11 C 1.53001 * 113.61147 * 220.02179 * 9 8 6 12 12 N 1.46499 * 109.46818 * 282.49015 * 11 9 8 13 13 C 1.34776 * 119.99941 * 179.97438 * 12 11 9 14 14 O 1.21283 * 120.00254 * 0.02562 * 13 12 11 15 15 C 1.50699 * 120.00405 * 180.02562 * 13 12 11 16 16 O 1.42894 * 109.47583 * 180.02562 * 15 13 12 17 17 C 1.35900 * 117.00370 * 179.97438 * 16 15 13 18 18 C 1.38708 * 120.05751 * 180.02562 * 17 16 15 19 19 C 1.50697 * 120.02761 * 0.02562 * 18 17 16 20 20 O 1.42902 * 109.46958 * 284.99588 * 19 18 17 21 21 Si 1.86304 * 109.47015 * 165.00056 * 19 18 17 22 22 C 1.38171 * 119.94045 * 180.02562 * 18 17 16 23 23 C 1.38240 * 120.06065 * 359.97438 * 22 18 17 24 24 C 1.38295 * 120.10794 * 0.02562 * 23 22 18 25 25 C 1.38119 * 120.05704 * 0.02562 * 24 23 22 26 26 C 1.53781 * 87.07904 * 334.56561 * 9 8 6 27 27 H 1.09007 * 109.46775 * 300.00101 * 1 2 3 28 28 H 1.09003 * 109.46808 * 59.99513 * 1 2 3 29 29 H 1.08995 * 109.47348 * 180.02562 * 1 2 3 30 30 H 1.08998 * 109.46686 * 240.00176 * 2 1 3 31 31 H 1.09003 * 109.46808 * 120.00487 * 2 1 3 32 32 H 1.08998 * 113.61483 * 25.42731 * 8 6 4 33 33 H 1.09007 * 113.61022 * 254.52837 * 8 6 4 34 34 H 0.96698 * 113.99629 * 80.93435 * 10 9 8 35 35 H 1.08993 * 109.46929 * 162.49504 * 11 9 8 36 36 H 1.08998 * 109.47456 * 42.49283 * 11 9 8 37 37 H 0.97002 * 120.00478 * 0.02562 * 12 11 9 38 38 H 1.09001 * 109.47049 * 59.99786 * 15 13 12 39 39 H 1.08998 * 109.46949 * 300.00530 * 15 13 12 40 40 H 1.08995 * 109.47425 * 44.99934 * 19 18 17 41 41 H 0.96696 * 114.00159 * 180.02562 * 20 19 18 42 42 H 1.48499 * 110.00192 * 59.99805 * 21 19 18 43 43 H 1.48502 * 109.99803 * 181.31811 * 21 19 18 44 44 H 1.08005 * 119.97011 * 180.02562 * 22 18 17 45 45 H 1.07995 * 119.94494 * 180.27435 * 23 22 18 46 46 H 1.07997 * 119.96986 * 179.97438 * 24 23 22 47 47 H 1.08001 * 120.02616 * 179.97438 * 25 24 23 48 48 H 1.09000 * 113.61659 * 139.98334 * 26 9 8 49 49 H 1.08996 * 113.61754 * 270.88787 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3449 1.5447 -0.0005 5 8 4.0808 0.5865 -0.0005 6 6 3.9209 2.9372 0.0000 7 1 3.4711 3.5817 -0.7553 8 6 3.9872 3.5760 1.3973 9 6 5.3572 4.1418 0.9875 10 8 5.2841 5.4198 0.3526 11 6 6.3999 4.0928 2.1062 12 7 6.1478 5.1789 3.0565 13 6 6.9463 5.3326 4.1313 14 8 7.8737 4.5721 4.3117 15 6 6.6867 6.4495 5.1093 16 8 7.6606 6.4039 6.1540 17 6 7.5684 7.3500 7.1252 18 6 8.4814 7.3650 8.1693 19 6 9.5773 6.3323 8.2277 20 8 9.0291 5.0789 8.6408 21 14 10.8768 6.8741 9.4479 22 6 8.3852 8.3277 9.1557 23 6 7.3804 9.2757 9.1024 24 6 6.4689 9.2628 8.0625 25 6 6.5602 8.3019 7.0745 26 6 5.4584 2.9679 -0.0007 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0276 0.0005 30 1 1.8933 -0.5138 -0.8900 31 1 1.8933 -0.5139 0.8900 32 1 4.0396 2.8490 2.2077 33 1 3.2302 4.3426 1.5632 34 1 5.1967 6.1603 0.9683 35 1 7.3962 4.2074 1.6794 36 1 6.3338 3.1353 2.6228 37 1 5.4059 5.7869 2.9125 38 1 5.6902 6.3347 5.5357 39 1 6.7529 7.4071 4.5929 40 1 10.0279 6.2243 7.2411 41 1 9.6795 4.3658 8.7009 42 1 10.2751 7.0249 10.7972 43 1 11.9787 5.8796 9.4914 44 1 9.0961 8.3402 9.9687 45 1 7.3096 10.0300 9.8720 46 1 5.6846 10.0042 8.0232 47 1 5.8478 8.2921 6.2628 48 1 5.8892 3.2434 -0.9633 49 1 5.9131 2.0746 0.4275 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_2989392.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:22 Heat of formation + Delta-G solvation = -170.778071 kcal Electronic energy + Delta-G solvation = -32518.425357 eV Core-core repulsion = 27800.334906 eV Total energy + Delta-G solvation = -4718.090451 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.18314 -41.57246 -40.86115 -40.07061 -38.42674 -37.66517 -37.47130 -36.08841 -35.51171 -32.88793 -32.73924 -31.51320 -30.52668 -28.70579 -27.15993 -26.58851 -26.16188 -23.93814 -23.45638 -22.47297 -21.97604 -21.77417 -20.90719 -19.35965 -19.23530 -18.60005 -18.38656 -17.74014 -17.59278 -17.45902 -17.40448 -17.33346 -16.86508 -16.61993 -16.37555 -15.94669 -15.61163 -15.43932 -15.16091 -15.07179 -14.89428 -14.70367 -14.47404 -14.29709 -13.95485 -13.82077 -13.77624 -13.66551 -13.60844 -13.30185 -13.01978 -12.99634 -12.84220 -12.68851 -12.65320 -12.41335 -12.18881 -11.85096 -11.75248 -11.67448 -11.54667 -11.48840 -11.08789 -10.96996 -10.39533 -10.28391 -9.97233 -9.20294 -4.90805 0.22973 0.42377 1.13088 1.31298 1.36329 1.39418 1.61992 1.64855 1.99945 2.43943 2.61393 2.66085 2.96303 3.18312 3.27846 3.32604 3.43139 3.49197 3.70269 3.81653 3.82434 3.83386 3.89124 3.91861 3.97172 4.03583 4.10921 4.20654 4.25511 4.26160 4.33195 4.41045 4.42814 4.50231 4.57279 4.64330 4.65417 4.69456 4.76443 4.77726 4.95180 4.96758 4.98659 5.03716 5.25639 5.36005 5.43966 5.50265 5.68914 6.05679 6.24005 6.31347 6.62466 6.72166 6.95819 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.470 3.530 5 O -0.504 6.504 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.146 4.146 9 C 0.098 3.902 10 O -0.529 6.529 11 C 0.106 3.894 12 N -0.730 5.730 13 C 0.518 3.482 14 O -0.505 6.505 15 C 0.040 3.960 16 O -0.280 6.280 17 C 0.150 3.850 18 C -0.100 4.100 19 C -0.066 4.066 20 O -0.531 6.531 21 Si 0.685 3.315 22 C -0.078 4.078 23 C -0.150 4.150 24 C -0.073 4.073 25 C -0.212 4.212 26 C -0.100 4.100 27 H 0.067 0.933 28 H 0.068 0.932 29 H 0.082 0.918 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.098 0.902 33 H 0.091 0.909 34 H 0.378 0.622 35 H 0.085 0.915 36 H 0.086 0.914 37 H 0.399 0.601 38 H 0.094 0.906 39 H 0.096 0.904 40 H 0.077 0.923 41 H 0.378 0.622 42 H -0.255 1.255 43 H -0.261 1.261 44 H 0.135 0.865 45 H 0.130 0.870 46 H 0.129 0.871 47 H 0.130 0.870 48 H 0.095 0.905 49 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.258 5.712 -1.303 7.243 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.391 6.391 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.183 4.183 9 C 0.056 3.944 10 O -0.335 6.335 11 C -0.018 4.018 12 N -0.386 5.386 13 C 0.303 3.697 14 O -0.377 6.377 15 C -0.039 4.039 16 O -0.191 6.191 17 C 0.104 3.896 18 C -0.101 4.101 19 C -0.176 4.176 20 O -0.338 6.338 21 Si 0.587 3.413 22 C -0.095 4.095 23 C -0.169 4.169 24 C -0.091 4.091 25 C -0.231 4.231 26 C -0.138 4.138 27 H 0.086 0.914 28 H 0.087 0.913 29 H 0.100 0.900 30 H 0.090 0.910 31 H 0.089 0.911 32 H 0.117 0.883 33 H 0.110 0.890 34 H 0.227 0.773 35 H 0.103 0.897 36 H 0.104 0.896 37 H 0.233 0.767 38 H 0.112 0.888 39 H 0.113 0.887 40 H 0.095 0.905 41 H 0.225 0.775 42 H -0.180 1.180 43 H -0.186 1.186 44 H 0.152 0.848 45 H 0.148 0.852 46 H 0.147 0.853 47 H 0.147 0.853 48 H 0.114 0.886 49 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -3.278 4.445 -0.980 5.609 hybrid contribution -0.977 -0.672 0.171 1.198 sum -4.254 3.773 -0.810 5.743 Atomic orbital electron populations 1.21824 0.92297 1.03294 1.03651 1.23098 0.95641 0.79830 1.02786 1.86517 1.24344 1.32781 1.83666 1.23515 0.80722 0.92292 0.72193 1.90692 1.60520 1.42900 1.45037 1.22412 0.97271 0.91085 1.01348 0.84981 1.23672 0.98194 1.01055 0.95426 1.22368 0.93626 0.85548 0.92868 1.86611 1.96037 1.14453 1.36403 1.21967 0.99775 0.91147 0.88871 1.45683 1.33449 1.33948 1.25566 1.20024 0.82550 0.85645 0.81498 1.90807 1.29177 1.44105 1.73652 1.22445 0.93705 0.98726 0.89064 1.86203 1.50649 1.49534 1.32752 1.18771 0.94097 0.88118 0.88577 1.18596 0.98117 0.98342 0.95013 1.24641 1.00698 0.85852 1.06407 1.86596 1.38140 1.18874 1.90155 0.95215 0.77578 0.89244 0.79304 1.20997 0.98087 0.93833 0.96632 1.21058 0.96007 1.00113 0.99677 1.21018 0.98042 0.96991 0.93040 1.21253 1.00630 0.98447 1.02730 1.23052 0.93265 0.96588 1.00879 0.91394 0.91334 0.89975 0.91037 0.91102 0.88305 0.89022 0.77348 0.89680 0.89592 0.76701 0.88772 0.88659 0.90542 0.77462 1.18015 1.18635 0.84774 0.85205 0.85294 0.85253 0.88646 0.86681 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.26 10.29 37.16 0.38 0.65 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.52 10.22 -39.27 -0.40 -0.93 16 4 C 0.47 0.79 7.48 36.00 0.27 1.06 16 5 O -0.50 -2.28 15.65 -18.75 -0.29 -2.57 16 6 C -0.10 0.12 4.20 -90.96 -0.38 -0.26 16 7 H 0.13 -0.27 8.14 -51.93 -0.42 -0.69 16 8 C -0.15 0.43 7.02 -25.92 -0.18 0.25 16 9 C 0.10 -0.27 1.41 -89.81 -0.13 -0.40 16 10 O -0.53 1.48 13.41 -35.23 -0.47 1.01 16 11 C 0.11 -0.19 5.26 -4.04 -0.02 -0.21 16 12 N -0.73 2.19 5.33 -60.30 -0.32 1.87 16 13 C 0.52 0.36 7.91 -10.99 -0.09 0.27 16 14 O -0.50 -3.02 16.50 -14.36 -0.24 -3.26 16 15 C 0.04 -0.05 5.22 36.01 0.19 0.14 16 16 O -0.28 -0.88 9.00 -39.34 -0.35 -1.23 16 17 C 0.15 0.37 6.66 -39.22 -0.26 0.10 16 18 C -0.10 -0.27 5.30 -104.47 -0.55 -0.83 16 19 C -0.07 -0.16 2.37 36.00 0.09 -0.08 16 20 O -0.53 -2.15 12.86 -35.23 -0.45 -2.60 16 21 Si 0.69 0.28 30.20 -169.99 -5.13 -4.85 16 22 C -0.08 -0.09 8.66 -39.61 -0.34 -0.43 16 23 C -0.15 0.00 10.04 -39.56 -0.40 -0.39 16 24 C -0.07 0.04 10.04 -39.60 -0.40 -0.36 16 25 C -0.21 0.01 9.04 -39.43 -0.36 -0.35 16 26 C -0.10 0.13 6.80 -25.92 -0.18 -0.05 16 27 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 29 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 30 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 31 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 32 H 0.10 -0.24 7.99 -51.93 -0.41 -0.66 16 33 H 0.09 -0.40 8.14 -51.92 -0.42 -0.82 16 34 H 0.38 -2.43 7.62 45.56 0.35 -2.08 16 35 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 36 H 0.09 -0.06 8.05 -51.93 -0.42 -0.48 16 37 H 0.40 -2.66 7.33 -40.82 -0.30 -2.96 16 38 H 0.09 -0.33 7.66 -51.93 -0.40 -0.73 16 39 H 0.10 -0.40 7.66 -51.93 -0.40 -0.80 16 40 H 0.08 0.18 7.83 -51.93 -0.41 -0.22 16 41 H 0.38 0.12 8.74 45.56 0.40 0.52 16 42 H -0.26 -0.68 6.75 56.52 0.38 -0.30 16 43 H -0.26 -0.67 7.11 56.52 0.40 -0.26 16 44 H 0.13 -0.02 4.90 -52.48 -0.26 -0.27 16 45 H 0.13 -0.27 8.06 -52.49 -0.42 -0.70 16 46 H 0.13 -0.37 8.06 -52.49 -0.42 -0.79 16 47 H 0.13 -0.38 6.30 -52.49 -0.33 -0.72 16 48 H 0.09 -0.11 8.14 -51.93 -0.42 -0.54 16 49 H 0.11 -0.06 7.39 -51.93 -0.38 -0.45 16 LS Contribution 411.75 15.07 6.20 6.20 Total: 0.00 -12.92 411.75 -10.02 -22.94 By element: Atomic # 1 Polarization: -9.52 SS G_CDS: -6.43 Total: -15.95 kcal Atomic # 6 Polarization: 1.50 SS G_CDS: -2.13 Total: -0.63 kcal Atomic # 7 Polarization: 2.19 SS G_CDS: -0.32 Total: 1.87 kcal Atomic # 8 Polarization: -7.37 SS G_CDS: -2.21 Total: -9.58 kcal Atomic # 14 Polarization: 0.28 SS G_CDS: -5.13 Total: -4.85 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -12.92 -10.02 -22.94 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_2989392.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -147.842 kcal (2) G-P(sol) polarization free energy of solvation -12.919 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -160.760 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.018 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.936 kcal (6) G-S(sol) free energy of system = (1) + (5) -170.778 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds