Wall clock time and date at job start Sun Mar 7 2021 07:05:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 O 1.45197 * 109.47236 * 2 1 4 4 C 1.34236 * 116.99804 * 180.02562 * 3 2 1 5 5 O 1.20826 * 119.99757 * 359.97438 * 4 3 2 6 6 C 1.50697 * 120.00027 * 180.02562 * 4 3 2 7 7 H 1.09000 * 112.84827 * 311.19224 * 6 4 3 8 8 C 1.53777 * 113.61765 * 82.50139 * 6 4 3 9 9 C 1.53781 * 87.08306 * 139.98426 * 8 6 4 10 10 O 1.42895 * 113.69549 * 89.12530 * 9 8 6 11 11 C 1.53001 * 113.61147 * 220.02179 * 9 8 6 12 12 N 1.46499 * 109.46818 * 282.49015 * 11 9 8 13 13 C 1.34776 * 119.99941 * 179.97438 * 12 11 9 14 14 O 1.21283 * 120.00254 * 0.02562 * 13 12 11 15 15 C 1.50699 * 120.00405 * 180.02562 * 13 12 11 16 16 O 1.42894 * 109.47583 * 180.02562 * 15 13 12 17 17 C 1.35900 * 117.00370 * 179.97438 * 16 15 13 18 18 C 1.38708 * 120.05751 * 180.02562 * 17 16 15 19 19 C 1.50697 * 120.02761 * 0.02562 * 18 17 16 20 20 O 1.42902 * 109.46958 * 284.99588 * 19 18 17 21 21 Si 1.86304 * 109.47015 * 165.00056 * 19 18 17 22 22 C 1.38171 * 119.94045 * 180.02562 * 18 17 16 23 23 C 1.38240 * 120.06065 * 359.97438 * 22 18 17 24 24 C 1.38295 * 120.10794 * 0.02562 * 23 22 18 25 25 C 1.38119 * 120.05704 * 0.02562 * 24 23 22 26 26 C 1.53781 * 87.07904 * 334.56561 * 9 8 6 27 27 H 1.09007 * 109.46775 * 300.00101 * 1 2 3 28 28 H 1.09003 * 109.46808 * 59.99513 * 1 2 3 29 29 H 1.08995 * 109.47348 * 180.02562 * 1 2 3 30 30 H 1.08998 * 109.46686 * 240.00176 * 2 1 3 31 31 H 1.09003 * 109.46808 * 120.00487 * 2 1 3 32 32 H 1.08998 * 113.61483 * 25.42731 * 8 6 4 33 33 H 1.09007 * 113.61022 * 254.52837 * 8 6 4 34 34 H 0.96698 * 113.99629 * 80.93435 * 10 9 8 35 35 H 1.08993 * 109.46929 * 162.49504 * 11 9 8 36 36 H 1.08998 * 109.47456 * 42.49283 * 11 9 8 37 37 H 0.97002 * 120.00478 * 0.02562 * 12 11 9 38 38 H 1.09001 * 109.47049 * 59.99786 * 15 13 12 39 39 H 1.08998 * 109.46949 * 300.00530 * 15 13 12 40 40 H 1.08995 * 109.47425 * 44.99934 * 19 18 17 41 41 H 0.96696 * 114.00159 * 180.02562 * 20 19 18 42 42 H 1.48499 * 110.00192 * 59.99805 * 21 19 18 43 43 H 1.48502 * 109.99803 * 181.31811 * 21 19 18 44 44 H 1.08005 * 119.97011 * 180.02562 * 22 18 17 45 45 H 1.07995 * 119.94494 * 180.27435 * 23 22 18 46 46 H 1.07997 * 119.96986 * 179.97438 * 24 23 22 47 47 H 1.08001 * 120.02616 * 179.97438 * 25 24 23 48 48 H 1.09000 * 113.61659 * 139.98334 * 26 9 8 49 49 H 1.08996 * 113.61754 * 270.88787 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3449 1.5447 -0.0005 5 8 4.0808 0.5865 -0.0005 6 6 3.9209 2.9372 0.0000 7 1 3.4711 3.5817 -0.7553 8 6 3.9872 3.5760 1.3973 9 6 5.3572 4.1418 0.9875 10 8 5.2841 5.4198 0.3526 11 6 6.3999 4.0928 2.1062 12 7 6.1478 5.1789 3.0565 13 6 6.9463 5.3326 4.1313 14 8 7.8737 4.5721 4.3117 15 6 6.6867 6.4495 5.1093 16 8 7.6606 6.4039 6.1540 17 6 7.5684 7.3500 7.1252 18 6 8.4814 7.3650 8.1693 19 6 9.5773 6.3323 8.2277 20 8 9.0291 5.0789 8.6408 21 14 10.8768 6.8741 9.4479 22 6 8.3852 8.3277 9.1557 23 6 7.3804 9.2757 9.1024 24 6 6.4689 9.2628 8.0625 25 6 6.5602 8.3019 7.0745 26 6 5.4584 2.9679 -0.0007 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0276 0.0005 30 1 1.8933 -0.5138 -0.8900 31 1 1.8933 -0.5139 0.8900 32 1 4.0396 2.8490 2.2077 33 1 3.2302 4.3426 1.5632 34 1 5.1967 6.1603 0.9683 35 1 7.3962 4.2074 1.6794 36 1 6.3338 3.1353 2.6228 37 1 5.4059 5.7869 2.9125 38 1 5.6902 6.3347 5.5357 39 1 6.7529 7.4071 4.5929 40 1 10.0279 6.2243 7.2411 41 1 9.6795 4.3658 8.7009 42 1 10.2751 7.0249 10.7972 43 1 11.9787 5.8796 9.4914 44 1 9.0961 8.3402 9.9687 45 1 7.3096 10.0300 9.8720 46 1 5.6846 10.0042 8.0232 47 1 5.8478 8.2921 6.2628 48 1 5.8892 3.2434 -0.9633 49 1 5.9131 2.0746 0.4275 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_2989392.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:21 Heat of formation + Delta-G solvation = -175.945345 kcal Electronic energy + Delta-G solvation = -32518.649427 eV Core-core repulsion = 27800.334906 eV Total energy + Delta-G solvation = -4718.314521 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -42.18193 -41.58807 -40.88080 -40.07907 -38.46844 -37.78993 -37.62692 -36.02271 -35.45467 -32.89529 -32.70374 -31.47050 -30.49098 -28.62324 -27.01057 -26.65762 -26.13463 -23.89618 -23.43394 -22.48123 -21.97095 -21.77181 -20.79798 -19.33053 -19.21516 -18.64852 -18.59718 -17.81077 -17.52741 -17.44252 -17.37442 -17.34555 -16.85990 -16.57360 -16.25220 -15.92164 -15.63147 -15.45233 -15.19348 -15.09616 -14.88942 -14.73727 -14.48119 -14.21944 -13.94838 -13.82547 -13.81563 -13.57968 -13.53531 -13.28686 -13.07734 -13.00245 -12.79458 -12.63534 -12.59123 -12.30498 -12.10975 -11.83437 -11.81823 -11.73985 -11.60433 -11.49688 -11.07973 -10.93165 -10.44971 -10.36086 -9.95369 -9.20251 -4.97782 0.24408 0.43536 1.01822 1.27031 1.37667 1.38865 1.55777 1.60968 1.88051 2.52857 2.67808 2.83753 3.08062 3.31740 3.39620 3.43176 3.44837 3.56422 3.78488 3.88091 3.93176 3.94538 3.97672 4.00752 4.06090 4.17455 4.18611 4.26021 4.28261 4.29102 4.35560 4.53540 4.55909 4.60927 4.66169 4.68273 4.78034 4.84056 4.86134 4.88337 4.98456 5.08328 5.10783 5.13398 5.29428 5.39152 5.40560 5.54437 5.76458 6.20939 6.38579 6.54943 6.60862 6.64484 7.03324 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.101 4.101 7 H 0.147 0.853 8 C -0.136 4.136 9 C 0.118 3.882 10 O -0.537 6.537 11 C 0.109 3.891 12 N -0.707 5.707 13 C 0.515 3.485 14 O -0.569 6.569 15 C 0.036 3.964 16 O -0.314 6.314 17 C 0.129 3.871 18 C -0.131 4.131 19 C -0.085 4.085 20 O -0.557 6.557 21 Si 0.778 3.222 22 C -0.090 4.090 23 C -0.155 4.155 24 C -0.074 4.074 25 C -0.210 4.210 26 C -0.110 4.110 27 H 0.070 0.930 28 H 0.069 0.931 29 H 0.095 0.905 30 H 0.066 0.934 31 H 0.067 0.933 32 H 0.093 0.907 33 H 0.116 0.884 34 H 0.395 0.605 35 H 0.069 0.931 36 H 0.072 0.928 37 H 0.420 0.580 38 H 0.122 0.878 39 H 0.131 0.869 40 H 0.066 0.934 41 H 0.388 0.612 42 H -0.283 1.283 43 H -0.291 1.291 44 H 0.140 0.860 45 H 0.150 0.850 46 H 0.158 0.842 47 H 0.161 0.839 48 H 0.093 0.907 49 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.366 8.263 -1.396 10.524 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.313 3.687 5 O -0.430 6.430 6 C -0.120 4.120 7 H 0.164 0.836 8 C -0.173 4.173 9 C 0.076 3.924 10 O -0.345 6.345 11 C -0.016 4.016 12 N -0.363 5.363 13 C 0.302 3.698 14 O -0.447 6.447 15 C -0.042 4.042 16 O -0.227 6.227 17 C 0.084 3.916 18 C -0.131 4.131 19 C -0.192 4.192 20 O -0.366 6.366 21 Si 0.683 3.317 22 C -0.108 4.108 23 C -0.173 4.173 24 C -0.092 4.092 25 C -0.228 4.228 26 C -0.148 4.148 27 H 0.089 0.911 28 H 0.088 0.912 29 H 0.114 0.886 30 H 0.085 0.915 31 H 0.085 0.915 32 H 0.111 0.889 33 H 0.135 0.865 34 H 0.247 0.753 35 H 0.088 0.912 36 H 0.091 0.909 37 H 0.259 0.741 38 H 0.139 0.861 39 H 0.148 0.852 40 H 0.084 0.916 41 H 0.237 0.763 42 H -0.211 1.211 43 H -0.219 1.219 44 H 0.157 0.843 45 H 0.168 0.832 46 H 0.175 0.825 47 H 0.178 0.822 48 H 0.112 0.888 49 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -5.458 7.046 -1.113 8.982 hybrid contribution -0.385 -1.484 0.140 1.540 sum -5.843 5.562 -0.972 8.126 Atomic orbital electron populations 1.21826 0.90576 1.04269 1.03813 1.23260 0.97024 0.79413 1.02404 1.86526 1.24253 1.33406 1.83382 1.24122 0.80545 0.93046 0.70960 1.90675 1.61202 1.44294 1.46833 1.22542 0.96828 0.89618 1.02973 0.83580 1.23656 0.98416 1.01191 0.94053 1.22027 0.93291 0.85461 0.91628 1.86592 1.95972 1.14729 1.37244 1.21849 0.99519 0.90987 0.89205 1.45455 1.33220 1.33538 1.24092 1.20539 0.81792 0.85405 0.82098 1.90783 1.32066 1.46563 1.75291 1.22733 0.94035 0.99229 0.88212 1.86153 1.52352 1.50336 1.33815 1.19029 0.95081 0.88892 0.88646 1.18855 0.98987 0.99043 0.96265 1.25019 1.01901 0.85466 1.06851 1.86548 1.39643 1.20063 1.90314 0.94128 0.74376 0.87294 0.75950 1.21144 0.98971 0.94110 0.96567 1.21399 0.95517 1.00004 1.00421 1.21421 0.98267 0.97156 0.92326 1.21616 1.00148 0.97407 1.03626 1.23072 0.93465 0.96994 1.01236 0.91130 0.91179 0.88622 0.91527 0.91490 0.88854 0.86539 0.75324 0.91239 0.90934 0.74094 0.86053 0.85156 0.91562 0.76316 1.21050 1.21888 0.84272 0.83180 0.82482 0.82154 0.88812 0.88028 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.55 10.29 71.98 0.74 1.29 16 2 C 0.05 0.06 6.19 71.98 0.45 0.51 16 3 O -0.36 -1.19 10.22 -51.47 -0.53 -1.72 16 4 C 0.47 1.98 7.48 71.23 0.53 2.51 16 5 O -0.54 -5.89 15.65 21.96 0.34 -5.55 16 6 C -0.10 0.26 4.20 -11.02 -0.05 0.21 16 7 H 0.15 -0.76 8.14 -2.39 -0.02 -0.78 16 8 C -0.14 0.94 7.02 31.12 0.22 1.16 16 9 C 0.12 -0.70 1.41 -10.27 -0.01 -0.72 16 10 O -0.54 3.93 13.41 -148.98 -2.00 1.93 16 11 C 0.11 -0.30 5.26 86.38 0.45 0.15 16 12 N -0.71 4.67 5.33 -463.07 -2.47 2.21 16 13 C 0.52 0.94 7.91 87.66 0.69 1.63 16 14 O -0.57 -8.22 16.50 16.00 0.26 -7.96 16 15 C 0.04 -0.12 5.22 71.24 0.37 0.25 16 16 O -0.31 -2.24 9.00 -73.39 -0.66 -2.90 16 17 C 0.13 0.66 6.66 22.51 0.15 0.81 16 18 C -0.13 -0.86 5.30 -19.77 -0.10 -0.96 16 19 C -0.08 -0.59 2.37 71.23 0.17 -0.43 16 20 O -0.56 -5.92 12.86 -148.98 -1.92 -7.84 16 21 Si 0.78 1.59 30.20 68.60 2.07 3.66 16 22 C -0.09 -0.24 8.66 22.25 0.19 -0.05 16 23 C -0.16 0.19 10.04 22.28 0.22 0.41 16 24 C -0.07 0.24 10.04 22.25 0.22 0.46 16 25 C -0.21 0.40 9.04 22.37 0.20 0.60 16 26 C -0.11 0.18 6.80 31.12 0.21 0.39 16 27 H 0.07 -0.28 8.14 -2.38 -0.02 -0.30 16 28 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 29 H 0.10 -0.61 8.14 -2.39 -0.02 -0.63 16 30 H 0.07 0.13 8.13 -2.39 -0.02 0.11 16 31 H 0.07 0.11 8.13 -2.39 -0.02 0.09 16 32 H 0.09 -0.48 7.99 -2.39 -0.02 -0.50 16 33 H 0.12 -1.34 8.14 -2.38 -0.02 -1.36 16 34 H 0.40 -6.13 7.62 -74.06 -0.56 -6.70 16 35 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 36 H 0.07 0.03 8.05 -2.39 -0.02 0.01 16 37 H 0.42 -6.59 7.33 -92.71 -0.68 -7.27 16 38 H 0.12 -1.13 7.66 -2.39 -0.02 -1.14 16 39 H 0.13 -1.43 7.66 -2.39 -0.02 -1.45 16 40 H 0.07 0.52 7.83 -2.39 -0.02 0.50 16 41 H 0.39 1.34 8.74 -74.06 -0.65 0.69 16 42 H -0.28 -1.83 6.75 99.48 0.67 -1.15 16 43 H -0.29 -1.94 7.11 99.48 0.71 -1.23 16 44 H 0.14 0.05 4.90 -2.91 -0.01 0.03 16 45 H 0.15 -0.90 8.06 -2.91 -0.02 -0.93 16 46 H 0.16 -1.45 8.06 -2.91 -0.02 -1.47 16 47 H 0.16 -1.50 6.30 -2.91 -0.02 -1.52 16 48 H 0.09 -0.14 8.14 -2.39 -0.02 -0.16 16 49 H 0.10 0.12 7.39 -2.39 -0.02 0.10 16 Total: 0.00 -34.12 411.75 -1.10 -35.23 By element: Atomic # 1 Polarization: -24.41 SS G_CDS: -0.88 Total: -25.29 kcal Atomic # 6 Polarization: 3.57 SS G_CDS: 4.66 Total: 8.23 kcal Atomic # 7 Polarization: 4.67 SS G_CDS: -2.47 Total: 2.21 kcal Atomic # 8 Polarization: -19.54 SS G_CDS: -4.49 Total: -24.04 kcal Atomic # 14 Polarization: 1.59 SS G_CDS: 2.07 Total: 3.66 kcal Total: -34.12 -1.10 -35.23 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_2989392.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -140.718 kcal (2) G-P(sol) polarization free energy of solvation -34.123 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -174.840 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.105 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.228 kcal (6) G-S(sol) free energy of system = (1) + (5) -175.945 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds