Wall clock time and date at job start Sun Mar 7 2021 07:05:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45205 * 109.47459 * 2 1 4 4 C 1.34229 * 117.00121 * 179.97438 * 3 2 1 5 5 O 1.20828 * 120.00037 * 359.97438 * 4 3 2 6 6 C 1.50697 * 119.99780 * 180.02562 * 4 3 2 7 7 H 1.09001 * 112.85363 * 311.19719 * 6 4 3 8 8 C 1.53787 * 113.69228 * 82.46707 * 6 4 3 9 9 C 1.53777 * 87.08094 * 139.98974 * 8 6 4 10 10 O 1.42900 * 113.69106 * 89.12703 * 9 8 6 11 11 C 1.53004 * 113.61260 * 220.01703 * 9 8 6 12 12 N 1.46499 * 109.47198 * 282.49959 * 11 9 8 13 13 C 1.34777 * 119.99665 * 180.27868 * 12 11 9 14 14 O 1.21283 * 119.99990 * 359.71991 * 13 12 11 15 15 C 1.50698 * 119.99538 * 179.72653 * 13 12 11 16 16 O 1.42908 * 109.46887 * 180.02562 * 15 13 12 17 17 C 1.35899 * 116.99727 * 179.97438 * 16 15 13 18 18 C 1.38734 * 120.05955 * 359.72512 * 17 16 15 19 19 C 1.38144 * 119.94149 * 179.74547 * 18 17 16 20 20 C 1.38262 * 120.05917 * 0.50015 * 19 18 17 21 21 C 1.50700 * 119.94382 * 179.74340 * 20 19 18 22 22 O 1.42907 * 109.46720 * 120.02684 * 21 20 19 23 23 Si 1.86298 * 109.47344 * 0.03016 * 21 20 19 24 24 C 1.38264 * 120.11099 * 359.77585 * 20 19 18 25 25 C 1.38146 * 120.05611 * 359.97200 * 24 20 19 26 26 C 1.53782 * 87.08314 * 334.56604 * 9 8 6 27 27 H 1.09002 * 109.46977 * 59.99923 * 1 2 3 28 28 H 1.08994 * 109.47148 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.46976 * 300.00136 * 1 2 3 30 30 H 1.08996 * 109.47536 * 240.00310 * 2 1 3 31 31 H 1.09002 * 109.46977 * 120.00077 * 2 1 3 32 32 H 1.08999 * 113.60898 * 25.44167 * 8 6 4 33 33 H 1.08995 * 113.61373 * 254.54085 * 8 6 4 34 34 H 0.96700 * 113.99760 * 80.93557 * 10 9 8 35 35 H 1.09009 * 109.46730 * 162.49746 * 11 9 8 36 36 H 1.08998 * 109.46846 * 42.50291 * 11 9 8 37 37 H 0.97001 * 119.99790 * 359.97438 * 12 11 9 38 38 H 1.09003 * 109.47112 * 299.99065 * 15 13 12 39 39 H 1.08993 * 109.47916 * 59.99687 * 15 13 12 40 40 H 1.08003 * 120.02498 * 359.97438 * 18 17 16 41 41 H 1.08008 * 119.96704 * 180.27851 * 19 18 17 42 42 H 1.08999 * 109.47385 * 240.02543 * 21 20 19 43 43 H 0.96695 * 113.99656 * 179.97438 * 22 21 20 44 44 H 1.48496 * 109.99785 * 298.67900 * 23 21 20 45 45 H 1.48499 * 109.99898 * 59.99654 * 23 21 20 46 46 H 1.08001 * 119.97081 * 179.97438 * 24 20 19 47 47 H 1.08002 * 120.02856 * 179.97438 * 25 24 20 48 48 H 1.09007 * 113.61114 * 139.98299 * 26 9 8 49 49 H 1.08997 * 113.61421 * 270.88542 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3690 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5866 0.0015 6 6 3.9208 2.9374 0.0012 7 1 3.4715 3.5816 -0.7546 8 6 3.9859 3.5785 1.3975 9 6 5.3562 4.1435 0.9879 10 8 5.2836 5.4206 0.3507 11 6 6.3979 4.0966 2.1075 12 7 6.1451 5.1842 3.0558 13 6 6.9463 5.3435 4.1278 14 8 7.8736 4.5833 4.3100 15 6 6.6899 6.4661 5.0999 16 8 7.6664 6.4257 6.1425 17 6 7.5772 7.3775 7.1085 18 6 6.5740 8.3340 7.0510 19 6 6.4824 9.2972 8.0371 20 6 7.3957 9.3147 9.0750 21 6 7.2968 10.3701 10.1462 22 8 7.1093 9.7431 11.4167 23 14 5.8503 11.4873 9.7857 24 6 8.3998 8.3659 9.1315 25 6 8.4927 7.3975 8.1507 26 6 5.4583 2.9680 0.0017 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 -1.0276 -0.0005 29 1 -0.3633 0.5139 0.8900 30 1 1.8934 -0.5137 -0.8899 31 1 1.8933 -0.5139 0.8900 32 1 4.0377 2.8528 2.2091 33 1 3.2288 4.3453 1.5615 34 1 5.1957 6.1622 0.9651 35 1 7.3948 4.2105 1.6813 36 1 6.3315 3.1399 2.6257 37 1 5.4036 5.7924 2.9098 38 1 6.7555 7.4208 4.5780 39 1 5.6944 6.3546 5.5295 40 1 5.8631 8.3234 6.2381 41 1 5.6989 10.0394 7.9952 42 1 8.2146 10.9578 10.1631 43 1 7.0376 10.3637 12.1547 44 1 6.0483 12.1696 8.4817 45 1 4.5928 10.6979 9.7601 46 1 9.1122 8.3820 9.9431 47 1 9.2775 6.6569 8.1950 48 1 5.8900 3.2419 -0.9610 49 1 5.9126 2.0754 0.4319 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_2989410.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:27 Heat of formation + Delta-G solvation = -172.710074 kcal Electronic energy + Delta-G solvation = -31830.683355 eV Core-core repulsion = 27112.509126 eV Total energy + Delta-G solvation = -4718.174229 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -42.19911 -41.58444 -40.87927 -40.12683 -38.92369 -37.68075 -37.23045 -36.10992 -35.54834 -32.75795 -32.56695 -31.88950 -30.85834 -28.85526 -27.18080 -26.42414 -25.95812 -24.14096 -23.77672 -22.36466 -21.98930 -21.80454 -20.92276 -19.60825 -19.28017 -18.63639 -18.41023 -17.75764 -17.65605 -17.52028 -17.42201 -17.40846 -16.75676 -16.66598 -16.40955 -15.99503 -15.72232 -15.59661 -15.23715 -15.10422 -14.84291 -14.54834 -14.50411 -14.32123 -14.12192 -13.96468 -13.86142 -13.68043 -13.63798 -13.45485 -13.30517 -13.02384 -12.85895 -12.66577 -12.50051 -12.42727 -12.20977 -12.03502 -11.87338 -11.84188 -11.55500 -11.50324 -11.11487 -11.01850 -10.43362 -10.36001 -10.09174 -9.25072 -5.02077 0.22590 0.25052 1.11950 1.24161 1.25506 1.34148 1.58144 1.60773 1.91256 2.37599 2.58344 2.59551 2.94516 3.15277 3.25967 3.30179 3.34806 3.40657 3.59949 3.72171 3.75750 3.76768 3.80712 3.89986 3.91128 3.96409 4.02140 4.18438 4.18612 4.25457 4.33452 4.39345 4.40642 4.41944 4.54972 4.59467 4.63401 4.68524 4.75367 4.76691 4.87858 4.93709 4.97970 4.99910 5.10252 5.17758 5.43055 5.46051 5.61191 6.01026 6.20909 6.24998 6.59719 6.71201 6.90794 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.470 3.530 5 O -0.504 6.504 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.146 4.146 9 C 0.097 3.903 10 O -0.529 6.529 11 C 0.105 3.895 12 N -0.730 5.730 13 C 0.518 3.482 14 O -0.505 6.505 15 C 0.040 3.960 16 O -0.287 6.287 17 C 0.133 3.867 18 C -0.204 4.204 19 C -0.083 4.083 20 C -0.112 4.112 21 C -0.067 4.067 22 O -0.546 6.546 23 Si 0.682 3.318 24 C -0.047 4.047 25 C -0.143 4.143 26 C -0.100 4.100 27 H 0.068 0.932 28 H 0.082 0.918 29 H 0.067 0.933 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.099 0.901 33 H 0.091 0.909 34 H 0.378 0.622 35 H 0.085 0.915 36 H 0.087 0.913 37 H 0.399 0.601 38 H 0.096 0.904 39 H 0.096 0.904 40 H 0.131 0.869 41 H 0.121 0.879 42 H 0.074 0.926 43 H 0.382 0.618 44 H -0.256 1.256 45 H -0.252 1.252 46 H 0.137 0.863 47 H 0.139 0.861 48 H 0.095 0.905 49 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.036 6.091 1.156 7.987 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.391 6.391 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.183 4.183 9 C 0.055 3.945 10 O -0.335 6.335 11 C -0.018 4.018 12 N -0.386 5.386 13 C 0.303 3.697 14 O -0.378 6.378 15 C -0.039 4.039 16 O -0.199 6.199 17 C 0.088 3.912 18 C -0.223 4.223 19 C -0.100 4.100 20 C -0.112 4.112 21 C -0.178 4.178 22 O -0.353 6.353 23 Si 0.584 3.416 24 C -0.065 4.065 25 C -0.161 4.161 26 C -0.138 4.138 27 H 0.087 0.913 28 H 0.100 0.900 29 H 0.086 0.914 30 H 0.090 0.910 31 H 0.089 0.911 32 H 0.117 0.883 33 H 0.110 0.890 34 H 0.226 0.774 35 H 0.104 0.896 36 H 0.105 0.895 37 H 0.233 0.767 38 H 0.114 0.886 39 H 0.114 0.886 40 H 0.149 0.851 41 H 0.138 0.862 42 H 0.092 0.908 43 H 0.230 0.770 44 H -0.181 1.181 45 H -0.176 1.176 46 H 0.155 0.845 47 H 0.156 0.844 48 H 0.114 0.886 49 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -4.589 4.308 -0.185 6.297 hybrid contribution -0.366 0.221 0.047 0.430 sum -4.955 4.529 -0.138 6.715 Atomic orbital electron populations 1.21821 0.92295 1.03302 1.03649 1.23100 0.95643 0.79813 1.02796 1.86516 1.24336 1.32802 1.83660 1.23504 0.80728 0.92275 0.72205 1.90693 1.60515 1.42893 1.45028 1.22411 0.97265 0.91099 1.01345 0.84987 1.23672 0.98162 1.01039 0.95469 1.22378 0.93643 0.85580 0.92858 1.86614 1.96035 1.14466 1.36397 1.21986 0.99827 0.91095 0.88901 1.45682 1.33296 1.33834 1.25772 1.20008 0.82541 0.85658 0.81525 1.90814 1.29183 1.44307 1.73484 1.22459 0.93528 0.98822 0.89094 1.86174 1.50947 1.49345 1.33446 1.19033 0.94855 0.88234 0.89099 1.21096 1.01045 0.97970 1.02174 1.20637 0.97393 0.97711 0.94298 1.19277 0.97352 0.98613 0.95946 1.24614 1.09070 0.98685 0.85414 1.86495 1.96136 1.37119 1.15509 0.95291 0.77776 0.82967 0.85589 1.20852 0.96828 0.92042 0.96790 1.20553 1.00321 1.01484 0.93766 1.23055 0.93278 0.96541 1.00894 0.91342 0.89963 0.91392 0.91027 0.91093 0.88283 0.89036 0.77371 0.89632 0.89502 0.76677 0.88610 0.88641 0.85089 0.86186 0.90772 0.77029 1.18075 1.17625 0.84497 0.84355 0.88632 0.86649 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.26 10.29 37.16 0.38 0.64 16 2 C 0.06 0.02 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.54 10.22 -39.26 -0.40 -0.94 16 4 C 0.47 0.80 7.49 36.00 0.27 1.07 16 5 O -0.50 -2.29 15.65 -18.75 -0.29 -2.58 16 6 C -0.10 0.12 4.19 -90.96 -0.38 -0.26 16 7 H 0.13 -0.26 8.14 -51.93 -0.42 -0.68 16 8 C -0.15 0.43 7.02 -25.92 -0.18 0.24 16 9 C 0.10 -0.26 1.41 -89.81 -0.13 -0.39 16 10 O -0.53 1.38 13.41 -35.23 -0.47 0.91 16 11 C 0.11 -0.18 5.26 -4.04 -0.02 -0.20 16 12 N -0.73 2.13 5.33 -60.29 -0.32 1.81 16 13 C 0.52 0.38 7.91 -10.99 -0.09 0.29 16 14 O -0.51 -3.06 16.50 -14.35 -0.24 -3.30 16 15 C 0.04 -0.05 5.22 36.00 0.19 0.14 16 16 O -0.29 -0.87 9.67 -39.33 -0.38 -1.25 16 17 C 0.13 0.34 6.69 -39.21 -0.26 0.07 16 18 C -0.20 -0.22 9.04 -39.43 -0.36 -0.57 16 19 C -0.08 -0.15 8.66 -39.61 -0.34 -0.50 16 20 C -0.11 -0.23 5.42 -104.60 -0.57 -0.80 16 21 C -0.07 0.02 2.81 36.01 0.10 0.12 16 22 O -0.55 -0.02 12.74 -35.23 -0.45 -0.47 16 23 Si 0.68 -0.97 29.78 -169.99 -5.06 -6.03 16 24 C -0.05 -0.10 9.60 -39.61 -0.38 -0.48 16 25 C -0.14 -0.36 9.99 -39.43 -0.39 -0.75 16 26 C -0.10 0.12 6.80 -25.92 -0.18 -0.06 16 27 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 28 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 29 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 30 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 31 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 32 H 0.10 -0.25 7.99 -51.93 -0.41 -0.66 16 33 H 0.09 -0.39 8.14 -51.93 -0.42 -0.81 16 34 H 0.38 -2.35 7.62 45.56 0.35 -2.00 16 35 H 0.09 -0.02 8.14 -51.92 -0.42 -0.45 16 36 H 0.09 -0.07 8.05 -51.93 -0.42 -0.48 16 37 H 0.40 -2.62 7.32 -40.82 -0.30 -2.92 16 38 H 0.10 -0.37 7.65 -51.93 -0.40 -0.77 16 39 H 0.10 -0.35 7.67 -51.93 -0.40 -0.75 16 40 H 0.13 -0.26 6.30 -52.48 -0.33 -0.59 16 41 H 0.12 0.11 4.87 -52.48 -0.26 -0.14 16 42 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 43 H 0.38 -1.91 8.74 45.56 0.40 -1.51 16 44 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 45 H -0.25 -0.44 7.11 56.52 0.40 -0.03 16 46 H 0.14 0.08 8.06 -52.49 -0.42 -0.34 16 47 H 0.14 0.23 8.06 -52.49 -0.42 -0.19 16 48 H 0.10 -0.10 8.14 -51.93 -0.42 -0.53 16 49 H 0.12 -0.06 7.39 -51.93 -0.38 -0.44 16 LS Contribution 412.47 15.07 6.22 6.22 Total: 0.00 -13.09 412.47 -9.92 -23.01 By element: Atomic # 1 Polarization: -9.79 SS G_CDS: -6.41 Total: -16.21 kcal Atomic # 6 Polarization: 0.93 SS G_CDS: -2.11 Total: -1.18 kcal Atomic # 7 Polarization: 2.13 SS G_CDS: -0.32 Total: 1.81 kcal Atomic # 8 Polarization: -5.38 SS G_CDS: -2.23 Total: -7.62 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: -5.06 Total: -6.03 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -13.09 -9.92 -23.01 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_2989410.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -149.701 kcal (2) G-P(sol) polarization free energy of solvation -13.088 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -162.789 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.921 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.009 kcal (6) G-S(sol) free energy of system = (1) + (5) -172.710 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds