Wall clock time and date at job start Sun Mar 7 2021 07:05:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45205 * 109.47459 * 2 1 4 4 C 1.34229 * 117.00121 * 179.97438 * 3 2 1 5 5 O 1.20828 * 120.00037 * 359.97438 * 4 3 2 6 6 C 1.50697 * 119.99780 * 180.02562 * 4 3 2 7 7 H 1.09001 * 112.85363 * 311.19719 * 6 4 3 8 8 C 1.53787 * 113.69228 * 82.46707 * 6 4 3 9 9 C 1.53777 * 87.08094 * 139.98974 * 8 6 4 10 10 O 1.42900 * 113.69106 * 89.12703 * 9 8 6 11 11 C 1.53004 * 113.61260 * 220.01703 * 9 8 6 12 12 N 1.46499 * 109.47198 * 282.49959 * 11 9 8 13 13 C 1.34777 * 119.99665 * 180.27868 * 12 11 9 14 14 O 1.21283 * 119.99990 * 359.71991 * 13 12 11 15 15 C 1.50698 * 119.99538 * 179.72653 * 13 12 11 16 16 O 1.42908 * 109.46887 * 180.02562 * 15 13 12 17 17 C 1.35899 * 116.99727 * 179.97438 * 16 15 13 18 18 C 1.38734 * 120.05955 * 359.72512 * 17 16 15 19 19 C 1.38144 * 119.94149 * 179.74547 * 18 17 16 20 20 C 1.38262 * 120.05917 * 0.50015 * 19 18 17 21 21 C 1.50700 * 119.94382 * 179.74340 * 20 19 18 22 22 O 1.42907 * 109.46720 * 120.02684 * 21 20 19 23 23 Si 1.86298 * 109.47344 * 0.03016 * 21 20 19 24 24 C 1.38264 * 120.11099 * 359.77585 * 20 19 18 25 25 C 1.38146 * 120.05611 * 359.97200 * 24 20 19 26 26 C 1.53782 * 87.08314 * 334.56604 * 9 8 6 27 27 H 1.09002 * 109.46977 * 59.99923 * 1 2 3 28 28 H 1.08994 * 109.47148 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.46976 * 300.00136 * 1 2 3 30 30 H 1.08996 * 109.47536 * 240.00310 * 2 1 3 31 31 H 1.09002 * 109.46977 * 120.00077 * 2 1 3 32 32 H 1.08999 * 113.60898 * 25.44167 * 8 6 4 33 33 H 1.08995 * 113.61373 * 254.54085 * 8 6 4 34 34 H 0.96700 * 113.99760 * 80.93557 * 10 9 8 35 35 H 1.09009 * 109.46730 * 162.49746 * 11 9 8 36 36 H 1.08998 * 109.46846 * 42.50291 * 11 9 8 37 37 H 0.97001 * 119.99790 * 359.97438 * 12 11 9 38 38 H 1.09003 * 109.47112 * 299.99065 * 15 13 12 39 39 H 1.08993 * 109.47916 * 59.99687 * 15 13 12 40 40 H 1.08003 * 120.02498 * 359.97438 * 18 17 16 41 41 H 1.08008 * 119.96704 * 180.27851 * 19 18 17 42 42 H 1.08999 * 109.47385 * 240.02543 * 21 20 19 43 43 H 0.96695 * 113.99656 * 179.97438 * 22 21 20 44 44 H 1.48496 * 109.99785 * 298.67900 * 23 21 20 45 45 H 1.48499 * 109.99898 * 59.99654 * 23 21 20 46 46 H 1.08001 * 119.97081 * 179.97438 * 24 20 19 47 47 H 1.08002 * 120.02856 * 179.97438 * 25 24 20 48 48 H 1.09007 * 113.61114 * 139.98299 * 26 9 8 49 49 H 1.08997 * 113.61421 * 270.88542 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3690 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5866 0.0015 6 6 3.9208 2.9374 0.0012 7 1 3.4715 3.5816 -0.7546 8 6 3.9859 3.5785 1.3975 9 6 5.3562 4.1435 0.9879 10 8 5.2836 5.4206 0.3507 11 6 6.3979 4.0966 2.1075 12 7 6.1451 5.1842 3.0558 13 6 6.9463 5.3435 4.1278 14 8 7.8736 4.5833 4.3100 15 6 6.6899 6.4661 5.0999 16 8 7.6664 6.4257 6.1425 17 6 7.5772 7.3775 7.1085 18 6 6.5740 8.3340 7.0510 19 6 6.4824 9.2972 8.0371 20 6 7.3957 9.3147 9.0750 21 6 7.2968 10.3701 10.1462 22 8 7.1093 9.7431 11.4167 23 14 5.8503 11.4873 9.7857 24 6 8.3998 8.3659 9.1315 25 6 8.4927 7.3975 8.1507 26 6 5.4583 2.9680 0.0017 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 -1.0276 -0.0005 29 1 -0.3633 0.5139 0.8900 30 1 1.8934 -0.5137 -0.8899 31 1 1.8933 -0.5139 0.8900 32 1 4.0377 2.8528 2.2091 33 1 3.2288 4.3453 1.5615 34 1 5.1957 6.1622 0.9651 35 1 7.3948 4.2105 1.6813 36 1 6.3315 3.1399 2.6257 37 1 5.4036 5.7924 2.9098 38 1 6.7555 7.4208 4.5780 39 1 5.6944 6.3546 5.5295 40 1 5.8631 8.3234 6.2381 41 1 5.6989 10.0394 7.9952 42 1 8.2146 10.9578 10.1631 43 1 7.0376 10.3637 12.1547 44 1 6.0483 12.1696 8.4817 45 1 4.5928 10.6979 9.7601 46 1 9.1122 8.3820 9.9431 47 1 9.2775 6.6569 8.1950 48 1 5.8900 3.2419 -0.9610 49 1 5.9126 2.0754 0.4319 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_2989410.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:26 Heat of formation + Delta-G solvation = -178.009119 kcal Electronic energy + Delta-G solvation = -31830.913139 eV Core-core repulsion = 27112.509126 eV Total energy + Delta-G solvation = -4718.404013 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.19858 -41.64500 -40.92057 -40.14198 -38.96044 -37.80258 -37.19886 -36.05093 -35.49275 -32.72684 -32.60935 -31.93416 -30.83258 -28.78230 -27.03368 -26.41674 -25.93863 -24.18765 -23.75389 -22.41052 -21.98204 -21.81389 -20.81663 -19.63149 -19.27086 -18.69250 -18.33736 -17.82376 -17.61802 -17.47477 -17.46515 -17.39501 -16.77526 -16.62407 -16.30178 -15.97827 -15.76739 -15.57162 -15.26100 -15.12270 -14.84281 -14.56391 -14.51577 -14.25229 -14.11859 -13.91776 -13.83294 -13.62615 -13.55007 -13.47402 -13.29604 -13.01252 -12.81487 -12.60092 -12.50589 -12.32367 -12.21230 -12.08627 -11.86017 -11.78990 -11.61207 -11.51822 -11.14088 -10.95720 -10.40020 -10.28797 -10.17876 -9.32320 -4.90754 0.12104 0.17663 1.00783 1.30465 1.32207 1.33500 1.59409 1.66675 1.97874 2.43237 2.51139 2.81553 3.06210 3.27788 3.36399 3.39859 3.43631 3.51604 3.61878 3.74593 3.86603 3.90739 3.92560 3.96849 3.98509 4.00078 4.14364 4.16833 4.26968 4.27737 4.32109 4.41596 4.54542 4.57922 4.60926 4.64762 4.76916 4.81452 4.82424 4.85372 4.86791 5.03547 5.06399 5.08821 5.09453 5.10584 5.37293 5.38315 5.55842 6.10739 6.28990 6.59853 6.61260 6.93123 6.97973 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.101 4.101 7 H 0.146 0.854 8 C -0.135 4.135 9 C 0.117 3.883 10 O -0.538 6.538 11 C 0.108 3.892 12 N -0.706 5.706 13 C 0.516 3.484 14 O -0.569 6.569 15 C 0.035 3.965 16 O -0.316 6.316 17 C 0.122 3.878 18 C -0.199 4.199 19 C -0.098 4.098 20 C -0.129 4.129 21 C -0.079 4.079 22 O -0.566 6.566 23 Si 0.774 3.226 24 C -0.057 4.057 25 C -0.161 4.161 26 C -0.110 4.110 27 H 0.069 0.931 28 H 0.095 0.905 29 H 0.070 0.930 30 H 0.066 0.934 31 H 0.067 0.933 32 H 0.094 0.906 33 H 0.115 0.885 34 H 0.395 0.605 35 H 0.070 0.930 36 H 0.075 0.925 37 H 0.421 0.579 38 H 0.129 0.871 39 H 0.126 0.874 40 H 0.164 0.836 41 H 0.127 0.873 42 H 0.092 0.908 43 H 0.403 0.597 44 H -0.284 1.284 45 H -0.295 1.295 46 H 0.144 0.856 47 H 0.135 0.865 48 H 0.093 0.907 49 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.750 8.119 1.218 10.628 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.314 3.686 5 O -0.430 6.430 6 C -0.120 4.120 7 H 0.163 0.837 8 C -0.173 4.173 9 C 0.075 3.925 10 O -0.346 6.346 11 C -0.016 4.016 12 N -0.363 5.363 13 C 0.303 3.697 14 O -0.447 6.447 15 C -0.043 4.043 16 O -0.229 6.229 17 C 0.077 3.923 18 C -0.218 4.218 19 C -0.116 4.116 20 C -0.130 4.130 21 C -0.188 4.188 22 O -0.376 6.376 23 Si 0.679 3.321 24 C -0.074 4.074 25 C -0.179 4.179 26 C -0.147 4.147 27 H 0.088 0.912 28 H 0.114 0.886 29 H 0.089 0.911 30 H 0.085 0.915 31 H 0.086 0.914 32 H 0.113 0.887 33 H 0.134 0.866 34 H 0.246 0.754 35 H 0.088 0.912 36 H 0.094 0.906 37 H 0.259 0.741 38 H 0.147 0.853 39 H 0.144 0.856 40 H 0.181 0.819 41 H 0.144 0.856 42 H 0.109 0.891 43 H 0.254 0.746 44 H -0.211 1.211 45 H -0.223 1.223 46 H 0.162 0.838 47 H 0.153 0.847 48 H 0.112 0.888 49 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -6.343 6.393 -0.110 9.007 hybrid contribution 0.129 -0.441 -0.024 0.460 sum -6.214 5.952 -0.134 8.605 Atomic orbital electron populations 1.21823 0.90593 1.04278 1.03797 1.23261 0.97009 0.79389 1.02430 1.86526 1.24252 1.33438 1.83377 1.24101 0.80549 0.93018 0.70979 1.90676 1.61189 1.44274 1.46814 1.22539 0.96836 0.89646 1.02978 0.83656 1.23657 0.98339 1.01178 0.94117 1.22048 0.93361 0.85452 0.91659 1.86596 1.95980 1.14785 1.37263 1.21876 0.99533 0.91004 0.89222 1.45459 1.33060 1.33441 1.24304 1.20477 0.81789 0.85389 0.82087 1.90791 1.32036 1.46736 1.75119 1.22773 0.93989 0.99280 0.88262 1.86133 1.52627 1.49798 1.34381 1.19138 0.95378 0.88693 0.89138 1.21408 1.00883 0.96809 1.02674 1.20873 0.97682 0.98328 0.94713 1.19692 0.97264 0.99181 0.96827 1.24832 1.10820 0.98217 0.84930 1.86444 1.96226 1.38652 1.16305 0.94268 0.74069 0.80369 0.83362 1.20989 0.97307 0.92173 0.96980 1.20728 1.00814 1.01883 0.94519 1.23075 0.93465 0.96967 1.01227 0.91214 0.88602 0.91130 0.91519 0.91444 0.88708 0.86618 0.75375 0.91194 0.90648 0.74090 0.85329 0.85616 0.81854 0.85588 0.89065 0.74631 1.21134 1.22297 0.83785 0.84664 0.88849 0.87913 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.55 10.29 71.98 0.74 1.29 16 2 C 0.05 0.06 6.19 71.98 0.45 0.51 16 3 O -0.36 -1.20 10.22 -51.41 -0.53 -1.72 16 4 C 0.47 1.97 7.49 71.24 0.53 2.50 16 5 O -0.54 -5.83 15.65 21.96 0.34 -5.49 16 6 C -0.10 0.25 4.19 -11.01 -0.05 0.21 16 7 H 0.15 -0.73 8.14 -2.39 -0.02 -0.75 16 8 C -0.14 0.94 7.02 31.12 0.22 1.16 16 9 C 0.12 -0.69 1.41 -10.27 -0.01 -0.70 16 10 O -0.54 3.75 13.41 -148.98 -2.00 1.75 16 11 C 0.11 -0.32 5.26 86.38 0.45 0.14 16 12 N -0.71 4.73 5.33 -463.05 -2.47 2.26 16 13 C 0.52 0.78 7.91 87.66 0.69 1.47 16 14 O -0.57 -7.97 16.50 16.00 0.26 -7.71 16 15 C 0.03 -0.13 5.22 71.24 0.37 0.25 16 16 O -0.32 -2.05 9.67 -73.37 -0.71 -2.76 16 17 C 0.12 0.65 6.69 22.51 0.15 0.80 16 18 C -0.20 -0.24 9.04 22.37 0.20 -0.04 16 19 C -0.10 -0.33 8.66 22.25 0.19 -0.14 16 20 C -0.13 -0.56 5.42 -19.85 -0.11 -0.67 16 21 C -0.08 0.08 2.81 71.24 0.20 0.28 16 22 O -0.57 0.26 12.74 -148.98 -1.90 -1.64 16 23 Si 0.77 -2.69 29.78 68.60 2.04 -0.64 16 24 C -0.06 -0.28 9.60 22.25 0.21 -0.07 16 25 C -0.16 -1.04 9.99 22.37 0.22 -0.81 16 26 C -0.11 0.18 6.80 31.12 0.21 0.39 16 27 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 28 H 0.10 -0.61 8.14 -2.39 -0.02 -0.63 16 29 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 30 H 0.07 0.13 8.13 -2.39 -0.02 0.11 16 31 H 0.07 0.11 8.13 -2.39 -0.02 0.09 16 32 H 0.09 -0.52 7.99 -2.39 -0.02 -0.54 16 33 H 0.12 -1.32 8.14 -2.39 -0.02 -1.34 16 34 H 0.40 -5.96 7.62 -74.06 -0.56 -6.53 16 35 H 0.07 0.06 8.14 -2.38 -0.02 0.04 16 36 H 0.08 0.00 8.05 -2.39 -0.02 -0.02 16 37 H 0.42 -6.56 7.32 -92.71 -0.68 -7.24 16 38 H 0.13 -1.34 7.65 -2.39 -0.02 -1.36 16 39 H 0.13 -1.24 7.67 -2.39 -0.02 -1.26 16 40 H 0.16 -1.09 6.30 -2.91 -0.02 -1.11 16 41 H 0.13 0.17 4.87 -2.91 -0.01 0.16 16 42 H 0.09 -0.44 7.96 -2.39 -0.02 -0.46 16 43 H 0.40 -4.43 8.74 -74.06 -0.65 -5.08 16 44 H -0.28 -0.31 7.11 99.48 0.71 0.39 16 45 H -0.30 -1.09 7.11 99.48 0.71 -0.38 16 46 H 0.14 0.32 8.06 -2.91 -0.02 0.30 16 47 H 0.14 0.77 8.06 -2.91 -0.02 0.74 16 48 H 0.09 -0.13 8.14 -2.38 -0.02 -0.15 16 49 H 0.10 0.10 7.39 -2.39 -0.02 0.08 16 Total: 0.00 -33.76 412.47 -1.11 -34.87 By element: Atomic # 1 Polarization: -24.66 SS G_CDS: -0.84 Total: -25.50 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: 4.68 Total: 6.58 kcal Atomic # 7 Polarization: 4.73 SS G_CDS: -2.47 Total: 2.26 kcal Atomic # 8 Polarization: -13.05 SS G_CDS: -4.52 Total: -17.57 kcal Atomic # 14 Polarization: -2.69 SS G_CDS: 2.04 Total: -0.64 kcal Total: -33.76 -1.11 -34.87 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_2989410.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -143.137 kcal (2) G-P(sol) polarization free energy of solvation -33.762 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -176.899 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.110 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.872 kcal (6) G-S(sol) free energy of system = (1) + (5) -178.009 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds