Wall clock time and date at job start Sun Mar 7 2021 07:05:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 O 1.45198 * 109.47092 * 2 1 4 4 C 1.34226 * 116.99972 * 179.97438 * 3 2 1 5 5 O 1.20829 * 120.00243 * 0.02562 * 4 3 2 6 6 C 1.50701 * 120.00120 * 180.02562 * 4 3 2 7 7 H 1.09002 * 112.85047 * 50.33376 * 6 4 3 8 8 C 1.53781 * 113.61772 * 181.53091 * 6 4 3 9 9 C 1.53777 * 87.08336 * 140.06093 * 8 6 4 10 10 O 1.42897 * 113.61121 * 89.20173 * 9 8 6 11 11 C 1.53002 * 113.61665 * 220.01809 * 9 8 6 12 12 N 1.46495 * 109.47196 * 180.02562 * 11 9 8 13 13 C 1.34770 * 120.00005 * 180.02562 * 12 11 9 14 14 O 1.21283 * 120.00518 * 0.02562 * 13 12 11 15 15 C 1.50707 * 120.00126 * 179.97438 * 13 12 11 16 16 C 1.52998 * 109.46981 * 179.97438 * 15 13 12 17 17 O 1.42909 * 109.46745 * 179.97438 * 16 15 13 18 18 C 1.35902 * 116.99485 * 179.97438 * 17 16 15 19 19 C 1.38729 * 120.05958 * 359.73027 * 18 17 16 20 20 C 1.38143 * 119.94143 * 179.74469 * 19 18 17 21 21 C 1.38261 * 120.05875 * 0.50768 * 20 19 18 22 22 C 1.50701 * 119.94592 * 179.75022 * 21 20 19 23 23 O 1.42904 * 109.46920 * 245.01900 * 22 21 20 24 24 Si 1.86296 * 109.47296 * 5.01755 * 22 21 20 25 25 C 1.38269 * 120.11101 * 359.76729 * 21 20 19 26 26 C 1.38145 * 120.05380 * 359.97438 * 25 21 20 27 27 C 1.53775 * 87.07992 * 334.56762 * 9 8 6 28 28 H 1.08998 * 109.46948 * 299.99504 * 1 2 3 29 29 H 1.08998 * 109.47257 * 59.99725 * 1 2 3 30 30 H 1.09002 * 109.47144 * 180.02562 * 1 2 3 31 31 H 1.08997 * 109.46999 * 239.99949 * 2 1 3 32 32 H 1.09000 * 109.47000 * 119.99798 * 2 1 3 33 33 H 1.08997 * 113.61673 * 254.61641 * 8 6 4 34 34 H 1.09005 * 113.61396 * 25.51470 * 8 6 4 35 35 H 0.96703 * 114.00127 * 180.02562 * 10 9 8 36 36 H 1.08998 * 109.46952 * 300.00110 * 11 9 8 37 37 H 1.08996 * 109.46841 * 60.00339 * 11 9 8 38 38 H 0.97007 * 119.99978 * 359.97438 * 12 11 9 39 39 H 1.08998 * 109.46979 * 299.99632 * 15 13 12 40 40 H 1.08996 * 109.47108 * 60.00041 * 15 13 12 41 41 H 1.08999 * 109.47548 * 300.00048 * 16 15 13 42 42 H 1.09004 * 109.47313 * 60.00099 * 16 15 13 43 43 H 1.07994 * 120.02864 * 359.97438 * 19 18 17 44 44 H 1.08001 * 119.97042 * 180.22989 * 20 19 18 45 45 H 1.08995 * 109.47355 * 125.02295 * 22 21 20 46 46 H 0.96696 * 114.00125 * 180.02562 * 23 22 21 47 47 H 1.48502 * 109.99919 * 300.00422 * 24 22 21 48 48 H 1.48505 * 109.99921 * 61.32177 * 24 22 21 49 49 H 1.07996 * 119.97385 * 179.97438 * 25 21 20 50 50 H 1.08001 * 120.02395 * 179.97438 * 26 25 21 51 51 H 1.08993 * 113.61636 * 270.87622 * 27 9 8 52 52 H 1.09008 * 113.61006 * 139.97865 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0808 0.5866 0.0005 6 6 3.9208 2.9374 0.0012 7 1 3.4898 3.5734 0.7744 8 6 5.4578 2.9683 -0.0359 9 6 5.3322 4.1543 -1.0067 10 8 5.2751 5.4244 -0.3543 11 6 6.3469 4.1196 -2.1513 12 7 6.1476 5.2851 -3.0161 13 6 6.9326 5.4646 -4.0968 14 8 7.8039 4.6609 -4.3537 15 6 6.7272 6.6633 -4.9868 16 6 7.7419 6.6285 -6.1313 17 8 7.5467 7.7649 -6.9756 18 6 8.3731 7.8862 -8.0476 19 6 9.3553 6.9342 -8.2791 20 6 10.1906 7.0571 -9.3725 21 6 10.0551 8.1332 -10.2300 22 6 10.9714 8.2677 -11.4189 23 8 11.7848 9.4324 -11.2640 24 14 12.0605 6.7609 -11.5372 25 6 9.0807 9.0864 -9.9983 26 6 8.2395 8.9653 -8.9092 27 6 3.9525 3.5935 -1.3893 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5139 -0.8899 30 1 -0.3633 -1.0277 0.0005 31 1 1.8934 -0.5138 -0.8900 32 1 1.8934 -0.5138 0.8900 33 1 5.9124 3.2319 0.9190 34 1 5.9017 2.0805 -0.4864 35 1 5.1956 6.1743 -0.9596 36 1 7.3570 4.1397 -1.7422 37 1 6.2082 3.2078 -2.7322 38 1 5.4500 5.9274 -2.8114 39 1 5.7170 6.6434 -5.3956 40 1 6.8663 7.5751 -4.4060 41 1 8.7520 6.6486 -5.7222 42 1 7.6033 5.7167 -6.7123 43 1 9.4644 6.0959 -7.6071 44 1 10.9529 6.3142 -9.5552 45 1 10.3765 8.3583 -12.3277 46 1 12.4003 9.5822 -11.9946 47 1 12.8768 6.6261 -10.3040 48 1 11.2280 5.5464 -11.7304 49 1 8.9772 9.9263 -10.6692 50 1 7.4788 9.7104 -8.7285 51 1 3.9847 2.8767 -2.2098 52 1 3.1917 4.3620 -1.5269 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_4549602.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:31 Heat of formation + Delta-G solvation = -186.305027 kcal Electronic energy + Delta-G solvation = -33428.369975 eV Core-core repulsion = 28554.068606 eV Total energy + Delta-G solvation = -4874.301369 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.181 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -42.18641 -41.50456 -41.04275 -40.18315 -39.14449 -37.80880 -37.25240 -36.08168 -35.42004 -33.55828 -32.70794 -32.22388 -31.68669 -29.72936 -27.12153 -26.84530 -26.21326 -25.28361 -23.88301 -23.48515 -22.19045 -21.96051 -21.63551 -20.82176 -19.74432 -19.00994 -18.42653 -18.37277 -17.87217 -17.75747 -17.61117 -17.40842 -17.15260 -16.83938 -16.75601 -16.41589 -16.13195 -15.85295 -15.52145 -15.36365 -15.03319 -14.83747 -14.76471 -14.67046 -14.46889 -14.21760 -14.05946 -13.95221 -13.82259 -13.69830 -13.55245 -13.32118 -13.04602 -12.99862 -12.88229 -12.78926 -12.59829 -12.49683 -12.31567 -12.03524 -11.96961 -11.81562 -11.79682 -11.61240 -11.51859 -11.17227 -10.95197 -10.33369 -10.30241 -10.19008 -9.33725 -4.98847 0.10897 0.16321 1.00758 1.29002 1.42290 1.51272 1.59886 1.62237 1.94714 2.32288 2.49558 2.81369 3.07049 3.32757 3.37810 3.39449 3.43884 3.50095 3.58994 3.70783 3.81496 3.86826 3.88817 3.92594 3.94763 4.00061 4.10215 4.17218 4.21924 4.27567 4.28132 4.33008 4.43038 4.54138 4.56241 4.61407 4.61869 4.64901 4.69672 4.77309 4.80640 4.83404 4.85449 4.86828 5.04848 5.07149 5.09960 5.11342 5.16462 5.35688 5.38168 5.57866 6.17826 6.27942 6.59553 6.60581 6.92478 7.03536 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.102 4.102 7 H 0.145 0.855 8 C -0.110 4.110 9 C 0.116 3.884 10 O -0.538 6.538 11 C 0.106 3.894 12 N -0.712 5.712 13 C 0.521 3.479 14 O -0.584 6.584 15 C -0.130 4.130 16 C 0.069 3.931 17 O -0.314 6.314 18 C 0.125 3.875 19 C -0.212 4.212 20 C -0.104 4.104 21 C -0.130 4.130 22 C -0.069 4.069 23 O -0.563 6.563 24 Si 0.768 3.232 25 C -0.054 4.054 26 C -0.151 4.151 27 C -0.135 4.135 28 H 0.069 0.931 29 H 0.070 0.930 30 H 0.095 0.905 31 H 0.067 0.933 32 H 0.066 0.934 33 H 0.092 0.908 34 H 0.103 0.897 35 H 0.394 0.606 36 H 0.068 0.932 37 H 0.075 0.925 38 H 0.419 0.581 39 H 0.134 0.866 40 H 0.133 0.867 41 H 0.061 0.939 42 H 0.062 0.938 43 H 0.134 0.866 44 H 0.115 0.885 45 H 0.098 0.902 46 H 0.403 0.597 47 H -0.302 1.302 48 H -0.293 1.293 49 H 0.155 0.845 50 H 0.155 0.845 51 H 0.095 0.905 52 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.206 4.602 -2.894 7.527 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.314 3.686 5 O -0.430 6.430 6 C -0.120 4.120 7 H 0.163 0.837 8 C -0.147 4.147 9 C 0.074 3.926 10 O -0.347 6.347 11 C -0.018 4.018 12 N -0.366 5.366 13 C 0.309 3.691 14 O -0.464 6.464 15 C -0.169 4.169 16 C -0.006 4.006 17 O -0.228 6.228 18 C 0.079 3.921 19 C -0.231 4.231 20 C -0.121 4.121 21 C -0.130 4.130 22 C -0.179 4.179 23 O -0.373 6.373 24 Si 0.676 3.324 25 C -0.072 4.072 26 C -0.169 4.169 27 C -0.172 4.172 28 H 0.088 0.912 29 H 0.089 0.911 30 H 0.114 0.886 31 H 0.086 0.914 32 H 0.085 0.915 33 H 0.111 0.889 34 H 0.121 0.879 35 H 0.246 0.754 36 H 0.086 0.914 37 H 0.094 0.906 38 H 0.257 0.743 39 H 0.152 0.848 40 H 0.151 0.849 41 H 0.079 0.921 42 H 0.081 0.919 43 H 0.152 0.848 44 H 0.132 0.868 45 H 0.116 0.884 46 H 0.255 0.745 47 H -0.231 1.231 48 H -0.220 1.220 49 H 0.172 0.828 50 H 0.172 0.828 51 H 0.113 0.887 52 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -4.662 2.754 -1.578 5.640 hybrid contribution -0.347 -0.265 0.214 0.486 sum -5.008 2.490 -1.363 5.757 Atomic orbital electron populations 1.21826 0.90590 1.04279 1.03800 1.23263 0.97013 0.79379 1.02432 1.86526 1.24235 1.33449 1.83368 1.24094 0.80558 0.92994 0.70972 1.90674 1.61183 1.44263 1.46832 1.22538 0.96861 0.89596 1.03038 0.83721 1.23079 0.93499 0.96895 1.01269 1.22066 0.93576 0.85499 0.91495 1.86596 1.96129 1.14763 1.37181 1.21847 0.99708 0.89486 0.90771 1.45646 1.37128 1.27316 1.26560 1.20671 0.80430 0.86761 0.81247 1.90769 1.35037 1.47509 1.73091 1.21435 1.02465 0.97823 0.95169 1.22483 1.00017 0.87020 0.91114 1.85959 1.54652 1.46265 1.35898 1.19130 0.90032 0.94906 0.87986 1.21317 0.99061 1.01751 1.00957 1.20827 0.98601 0.97959 0.94732 1.19641 0.99033 0.96387 0.97945 1.24654 0.97058 0.98883 0.97302 1.86444 1.55415 1.44548 1.50934 0.94605 0.80377 0.73708 0.83751 1.21103 0.92152 0.97744 0.96203 1.20801 1.02930 0.98114 0.95063 1.23656 0.98415 1.01008 0.94169 0.91226 0.91125 0.88591 0.91423 0.91523 0.88940 0.87914 0.75443 0.91366 0.90645 0.74288 0.84834 0.84862 0.92091 0.91935 0.84781 0.86807 0.88398 0.74550 1.23051 1.22035 0.82779 0.82761 0.88681 0.86841 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.54 10.29 71.98 0.74 1.28 16 2 C 0.05 0.06 6.19 71.98 0.45 0.51 16 3 O -0.36 -1.24 10.22 -51.38 -0.53 -1.77 16 4 C 0.47 2.05 7.49 71.24 0.53 2.58 16 5 O -0.54 -5.85 15.66 21.95 0.34 -5.51 16 6 C -0.10 0.22 4.19 -11.01 -0.05 0.17 16 7 H 0.15 -0.65 8.14 -2.39 -0.02 -0.67 16 8 C -0.11 0.16 6.78 31.12 0.21 0.37 16 9 C 0.12 -0.64 1.49 -10.27 -0.02 -0.66 16 10 O -0.54 3.47 13.41 -148.98 -2.00 1.47 16 11 C 0.11 -0.34 5.32 86.38 0.46 0.12 16 12 N -0.71 4.95 5.34 -463.07 -2.47 2.48 16 13 C 0.52 -0.37 7.83 87.66 0.69 0.32 16 14 O -0.58 -5.75 15.98 -3.04 -0.05 -5.80 16 15 C -0.13 0.74 6.07 29.85 0.18 0.92 16 16 C 0.07 0.11 4.03 71.98 0.29 0.40 16 17 O -0.31 -1.29 10.14 -92.44 -0.94 -2.22 16 18 C 0.12 0.84 6.69 22.51 0.15 0.99 16 19 C -0.21 -1.74 9.04 22.36 0.20 -1.54 16 20 C -0.10 -0.91 8.66 22.25 0.19 -0.72 16 21 C -0.13 -0.82 5.38 -19.85 -0.11 -0.93 16 22 C -0.07 -0.04 2.79 71.24 0.20 0.16 16 23 O -0.56 -0.21 12.81 -148.98 -1.91 -2.12 16 24 Si 0.77 0.11 29.85 68.60 2.05 2.15 16 25 C -0.05 -0.23 9.68 22.25 0.22 -0.01 16 26 C -0.15 -0.65 9.99 22.37 0.22 -0.43 16 27 C -0.13 0.87 7.02 31.12 0.22 1.09 16 28 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 29 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 30 H 0.10 -0.62 8.14 -2.39 -0.02 -0.64 16 31 H 0.07 0.10 8.13 -2.39 -0.02 0.09 16 32 H 0.07 0.13 8.13 -2.39 -0.02 0.11 16 33 H 0.09 -0.10 8.14 -2.39 -0.02 -0.12 16 34 H 0.10 0.10 7.41 -2.38 -0.02 0.09 16 35 H 0.39 -5.65 7.30 -74.06 -0.54 -6.19 16 36 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 37 H 0.08 -0.05 7.94 -2.39 -0.02 -0.07 16 38 H 0.42 -6.21 7.03 -92.70 -0.65 -6.87 16 39 H 0.13 -1.37 8.14 -2.39 -0.02 -1.39 16 40 H 0.13 -1.35 8.14 -2.39 -0.02 -1.37 16 41 H 0.06 0.24 7.61 -2.39 -0.02 0.22 16 42 H 0.06 0.22 7.63 -2.38 -0.02 0.20 16 43 H 0.13 0.91 6.30 -2.91 -0.02 0.89 16 44 H 0.11 0.99 4.86 -2.91 -0.01 0.97 16 45 H 0.10 -0.42 7.96 -2.39 -0.02 -0.44 16 46 H 0.40 -4.16 8.74 -74.06 -0.65 -4.81 16 47 H -0.30 -2.53 7.05 99.48 0.70 -1.83 16 48 H -0.29 -1.78 7.11 99.48 0.71 -1.07 16 49 H 0.15 -0.05 8.06 -2.91 -0.02 -0.07 16 50 H 0.15 -0.01 8.06 -2.91 -0.02 -0.04 16 51 H 0.09 -0.50 7.92 -2.39 -0.02 -0.52 16 52 H 0.11 -1.18 8.14 -2.38 -0.02 -1.20 16 Total: 0.00 -30.39 432.85 -1.55 -31.94 By element: Atomic # 1 Polarization: -24.42 SS G_CDS: -0.84 Total: -25.26 kcal Atomic # 6 Polarization: -0.15 SS G_CDS: 4.78 Total: 4.63 kcal Atomic # 7 Polarization: 4.95 SS G_CDS: -2.47 Total: 2.48 kcal Atomic # 8 Polarization: -10.87 SS G_CDS: -5.07 Total: -15.94 kcal Atomic # 14 Polarization: 0.11 SS G_CDS: 2.05 Total: 2.15 kcal Total: -30.39 -1.55 -31.94 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_4549602.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -154.367 kcal (2) G-P(sol) polarization free energy of solvation -30.386 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -184.753 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.552 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.938 kcal (6) G-S(sol) free energy of system = (1) + (5) -186.305 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds