Wall clock time and date at job start Sun Mar 7 2021 07:05:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 O 1.45192 * 109.47327 * 2 1 4 4 C 1.34233 * 117.00369 * 180.02562 * 3 2 1 5 5 O 1.20822 * 119.99583 * 359.97438 * 4 3 2 6 6 C 1.50700 * 120.00053 * 179.97438 * 4 3 2 7 7 H 1.08993 * 112.91004 * 311.24954 * 6 4 3 8 8 C 1.53962 * 113.66521 * 82.55365 * 6 4 3 9 9 C 1.53782 * 87.11063 * 139.88647 * 8 6 4 10 10 O 1.42895 * 113.61276 * 89.18486 * 9 8 6 11 11 C 1.53003 * 113.61259 * 220.08801 * 9 8 6 12 12 N 1.46501 * 109.47008 * 282.49690 * 11 9 8 13 13 C 1.34780 * 119.99835 * 179.97438 * 12 11 9 14 14 O 1.21281 * 119.99916 * 0.02562 * 13 12 11 15 15 C 1.50692 * 119.99897 * 180.02562 * 13 12 11 16 16 C 1.53003 * 109.47071 * 180.02562 * 15 13 12 17 17 O 1.42900 * 109.46964 * 180.02562 * 16 15 13 18 18 C 1.35904 * 116.99802 * 179.97438 * 17 16 15 19 19 C 1.38710 * 120.05531 * 179.97438 * 18 17 16 20 20 C 1.38170 * 119.94137 * 180.02562 * 19 18 17 21 21 C 1.50698 * 119.96900 * 180.02562 * 20 19 18 22 22 O 1.42899 * 109.47059 * 299.99569 * 21 20 19 23 23 Si 1.86298 * 109.47134 * 179.97438 * 21 20 19 24 24 C 1.38239 * 120.05930 * 359.97438 * 20 19 18 25 25 C 1.38292 * 120.11065 * 0.02730 * 24 20 19 26 26 C 1.38126 * 120.05245 * 359.67514 * 25 24 20 27 27 C 1.53781 * 87.08260 * 334.63747 * 9 8 6 28 28 H 1.08995 * 109.46824 * 59.99745 * 1 2 3 29 29 H 1.08997 * 109.47348 * 180.02562 * 1 2 3 30 30 H 1.09005 * 109.46699 * 300.00272 * 1 2 3 31 31 H 1.09001 * 109.47158 * 239.99871 * 2 1 3 32 32 H 1.09006 * 109.46796 * 119.99733 * 2 1 3 33 33 H 1.08997 * 113.53543 * 25.33321 * 8 6 4 34 34 H 1.08998 * 113.73879 * 254.46919 * 8 6 4 35 35 H 0.96707 * 113.99942 * 82.50612 * 10 9 8 36 36 H 1.09002 * 109.47145 * 42.49807 * 11 9 8 37 37 H 1.08997 * 109.46932 * 162.49761 * 11 9 8 38 38 H 0.96996 * 119.99946 * 0.02562 * 12 11 9 39 39 H 1.08996 * 109.47490 * 300.00277 * 15 13 12 40 40 H 1.08997 * 109.47300 * 60.00327 * 15 13 12 41 41 H 1.08996 * 109.47049 * 300.00375 * 16 15 13 42 42 H 1.08997 * 109.46932 * 59.99929 * 16 15 13 43 43 H 1.07996 * 120.03018 * 359.97438 * 19 18 17 44 44 H 1.09003 * 109.47809 * 59.99664 * 21 20 19 45 45 H 0.96704 * 114.00513 * 300.00342 * 22 21 20 46 46 H 1.48501 * 109.99989 * 179.97438 * 23 21 20 47 47 H 1.48508 * 109.99872 * 301.31568 * 23 21 20 48 48 H 1.07999 * 119.94501 * 179.97438 * 24 20 19 49 49 H 1.07993 * 119.97519 * 179.97438 * 25 24 20 50 50 H 1.08008 * 120.02540 * 180.32175 * 26 25 24 51 51 H 1.09002 * 113.61445 * 139.98212 * 27 9 8 52 52 H 1.09002 * 113.61408 * 270.79943 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5448 -0.0005 5 8 4.0808 0.5866 -0.0005 6 6 3.9208 2.9374 -0.0012 7 1 3.4710 3.5822 -0.7560 8 6 3.9886 3.5787 1.3969 9 6 5.3594 4.1421 0.9866 10 8 5.2862 5.4201 0.3516 11 6 6.4025 4.0914 2.1048 12 7 6.1526 5.1780 3.0552 13 6 6.9517 5.3305 4.1298 14 8 7.8779 4.5684 4.3097 15 6 6.6943 6.4478 5.1077 16 6 7.7375 6.3972 6.2259 17 8 7.4930 7.4564 7.1535 18 6 8.3360 7.5536 8.2150 19 6 8.1574 8.5586 9.1543 20 6 9.0161 8.6555 10.2323 21 6 8.8223 9.7468 11.2534 22 8 8.9247 11.0208 10.6143 23 14 10.1324 9.6049 12.5703 24 6 10.0524 7.7518 10.3756 25 6 10.2326 6.7490 9.4406 26 6 9.3731 6.6440 8.3644 27 6 5.4583 2.9680 -0.0017 28 1 -0.3633 0.5139 -0.8899 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3633 0.5139 0.8900 31 1 1.8934 -0.5139 -0.8900 32 1 1.8933 -0.5138 0.8901 33 1 4.0401 2.8516 2.2073 34 1 3.2334 4.3465 1.5645 35 1 5.2239 6.1626 0.9681 36 1 6.3350 3.1341 2.6216 37 1 7.3989 4.2043 1.6777 38 1 5.4116 5.7872 2.9115 39 1 6.7618 7.4053 4.5914 40 1 5.6978 6.3346 5.5346 41 1 7.6704 5.4397 6.7423 42 1 8.7338 6.5105 5.7987 43 1 7.3482 9.2651 9.0426 44 1 7.8371 9.6471 11.7093 45 1 9.7773 11.1787 10.1862 46 1 9.9525 10.6759 13.5831 47 1 10.0563 8.2720 13.2208 48 1 10.7228 7.8296 11.2188 49 1 11.0431 6.0444 9.5545 50 1 9.5112 5.8575 7.6372 51 1 5.8893 3.2428 -0.9645 52 1 5.9130 2.0744 0.4260 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_4549614.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:36 Heat of formation + Delta-G solvation = -188.265356 kcal Electronic energy + Delta-G solvation = -33476.877334 eV Core-core repulsion = 28602.490959 eV Total energy + Delta-G solvation = -4874.386376 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.181 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -42.15934 -41.41869 -40.98840 -40.14588 -39.10905 -37.79069 -37.26537 -36.00283 -35.41337 -33.40162 -32.69327 -32.46022 -30.99013 -29.60607 -27.14617 -26.97396 -26.47086 -24.94592 -23.74144 -23.66848 -22.15556 -21.93610 -21.51892 -20.78861 -19.47324 -18.98211 -18.45521 -17.83620 -17.78321 -17.68642 -17.54024 -17.38370 -17.11150 -16.85406 -16.72258 -16.36831 -16.17058 -16.03644 -15.41891 -15.31169 -15.00921 -14.87126 -14.74145 -14.63239 -14.41174 -14.21102 -14.19099 -13.90901 -13.79106 -13.52580 -13.28664 -13.21309 -13.00227 -12.93692 -12.85039 -12.75598 -12.58549 -12.38039 -12.29239 -11.99880 -11.82163 -11.77404 -11.63143 -11.59996 -11.50063 -11.12026 -10.92318 -10.50260 -10.29275 -9.93173 -9.28079 -4.97845 0.19070 0.38264 1.02063 1.30301 1.46892 1.55834 1.65086 1.67650 1.96953 2.40475 2.66088 2.84613 3.09889 3.35151 3.41919 3.46433 3.50405 3.55906 3.65893 3.84047 3.88322 3.88836 3.93633 3.96251 4.01099 4.09007 4.18920 4.22670 4.27669 4.28661 4.30632 4.38671 4.50391 4.56230 4.60534 4.64336 4.66774 4.68789 4.75468 4.78779 4.85378 4.86425 4.89376 4.97274 5.08980 5.11324 5.20637 5.25162 5.37228 5.39505 5.43218 5.69352 6.29436 6.34899 6.61222 6.63933 6.76254 7.07497 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.469 3.531 5 O -0.539 6.539 6 C -0.102 4.102 7 H 0.144 0.856 8 C -0.135 4.135 9 C 0.116 3.884 10 O -0.539 6.539 11 C 0.107 3.893 12 N -0.713 5.713 13 C 0.522 3.478 14 O -0.582 6.582 15 C -0.132 4.132 16 C 0.072 3.928 17 O -0.323 6.323 18 C 0.118 3.882 19 C -0.141 4.141 20 C -0.084 4.084 21 C -0.077 4.077 22 O -0.555 6.555 23 Si 0.784 3.216 24 C -0.158 4.158 25 C -0.076 4.076 26 C -0.212 4.212 27 C -0.109 4.109 28 H 0.069 0.931 29 H 0.095 0.905 30 H 0.069 0.931 31 H 0.066 0.934 32 H 0.068 0.932 33 H 0.094 0.906 34 H 0.113 0.887 35 H 0.395 0.605 36 H 0.075 0.925 37 H 0.070 0.930 38 H 0.418 0.582 39 H 0.131 0.869 40 H 0.128 0.872 41 H 0.063 0.937 42 H 0.066 0.934 43 H 0.128 0.872 44 H 0.107 0.893 45 H 0.396 0.604 46 H -0.298 1.298 47 H -0.285 1.285 48 H 0.148 0.852 49 H 0.152 0.848 50 H 0.136 0.864 51 H 0.092 0.908 52 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.220 2.527 -1.283 3.600 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.314 3.686 5 O -0.429 6.429 6 C -0.121 4.121 7 H 0.162 0.838 8 C -0.173 4.173 9 C 0.074 3.926 10 O -0.348 6.348 11 C -0.017 4.017 12 N -0.368 5.368 13 C 0.310 3.690 14 O -0.461 6.461 15 C -0.171 4.171 16 C -0.003 4.003 17 O -0.237 6.237 18 C 0.072 3.928 19 C -0.160 4.160 20 C -0.084 4.084 21 C -0.186 4.186 22 O -0.363 6.363 23 Si 0.690 3.310 24 C -0.175 4.175 25 C -0.093 4.093 26 C -0.230 4.230 27 C -0.147 4.147 28 H 0.088 0.912 29 H 0.114 0.886 30 H 0.089 0.911 31 H 0.085 0.915 32 H 0.086 0.914 33 H 0.113 0.887 34 H 0.131 0.869 35 H 0.246 0.754 36 H 0.093 0.907 37 H 0.088 0.912 38 H 0.256 0.744 39 H 0.149 0.851 40 H 0.147 0.853 41 H 0.081 0.919 42 H 0.084 0.916 43 H 0.146 0.854 44 H 0.125 0.875 45 H 0.246 0.754 46 H -0.226 1.226 47 H -0.212 1.212 48 H 0.165 0.835 49 H 0.170 0.830 50 H 0.154 0.846 51 H 0.111 0.889 52 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -1.971 1.366 -0.715 2.503 hybrid contribution -0.849 -0.342 -0.027 0.915 sum -2.820 1.025 -0.742 3.090 Atomic orbital electron populations 1.21825 0.90635 1.04266 1.03783 1.23259 0.96981 0.79390 1.02437 1.86527 1.24282 1.33443 1.83378 1.24093 0.80539 0.93004 0.70977 1.90670 1.61172 1.44242 1.46820 1.22566 0.96935 0.89630 1.02963 0.83814 1.23676 0.98449 1.01104 0.94046 1.22055 0.93418 0.85333 0.91825 1.86587 1.96215 1.14700 1.37254 1.21834 0.99293 0.91291 0.89310 1.45663 1.33397 1.33173 1.24518 1.20633 0.81215 0.85272 0.81889 1.90763 1.32320 1.47183 1.75859 1.21436 1.01965 0.99221 0.94501 1.22455 0.99653 0.88983 0.89245 1.85950 1.52212 1.51741 1.33830 1.19129 0.90371 0.95287 0.87972 1.20315 1.02241 0.98887 0.94526 1.20240 0.95152 0.97171 0.95884 1.25278 1.09808 0.82932 1.00630 1.86467 1.42445 1.32430 1.74941 0.93540 0.85267 0.76554 0.75687 1.21174 0.98802 0.96587 1.00967 1.21248 0.98303 0.97437 0.92352 1.21552 0.97745 1.01583 1.02160 1.23070 0.93340 0.97063 1.01222 0.91240 0.88599 0.91149 0.91518 0.91406 0.88722 0.86884 0.75389 0.90700 0.91188 0.74350 0.85075 0.85348 0.91878 0.91583 0.85405 0.87541 0.75426 1.22643 1.21163 0.83523 0.83019 0.84592 0.88944 0.87861 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.56 10.29 71.98 0.74 1.30 16 2 C 0.05 0.05 6.19 71.98 0.45 0.50 16 3 O -0.36 -1.16 10.22 -51.45 -0.53 -1.69 16 4 C 0.47 1.89 7.49 71.24 0.53 2.42 16 5 O -0.54 -5.61 15.65 21.98 0.34 -5.26 16 6 C -0.10 0.25 4.21 -10.95 -0.05 0.21 16 7 H 0.14 -0.68 8.14 -2.39 -0.02 -0.70 16 8 C -0.14 0.93 7.02 31.18 0.22 1.15 16 9 C 0.12 -0.70 1.42 -10.27 -0.01 -0.72 16 10 O -0.54 3.65 13.42 -148.98 -2.00 1.65 16 11 C 0.11 -0.43 5.26 86.38 0.45 0.03 16 12 N -0.71 5.46 5.32 -463.06 -2.46 3.00 16 13 C 0.52 -0.90 7.83 87.65 0.69 -0.22 16 14 O -0.58 -4.79 15.98 -3.03 -0.05 -4.84 16 15 C -0.13 0.83 6.07 29.85 0.18 1.01 16 16 C 0.07 0.00 4.03 71.98 0.29 0.29 16 17 O -0.32 -1.12 10.14 -92.47 -0.94 -2.06 16 18 C 0.12 0.55 6.69 22.51 0.15 0.70 16 19 C -0.14 -0.63 9.55 22.37 0.21 -0.42 16 20 C -0.08 -0.14 5.39 -19.88 -0.11 -0.25 16 21 C -0.08 -0.03 2.82 71.24 0.20 0.17 16 22 O -0.55 -0.57 12.77 -148.98 -1.90 -2.47 16 23 Si 0.78 -1.63 29.79 68.60 2.04 0.42 16 24 C -0.16 0.07 8.67 22.28 0.19 0.26 16 25 C -0.08 0.00 10.04 22.26 0.22 0.22 16 26 C -0.21 -0.56 9.04 22.37 0.20 -0.36 16 27 C -0.11 0.21 6.79 31.12 0.21 0.43 16 28 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 29 H 0.10 -0.63 8.14 -2.39 -0.02 -0.65 16 30 H 0.07 -0.28 8.14 -2.38 -0.02 -0.30 16 31 H 0.07 0.11 8.13 -2.39 -0.02 0.09 16 32 H 0.07 0.09 8.13 -2.38 -0.02 0.07 16 33 H 0.09 -0.53 7.99 -2.39 -0.02 -0.55 16 34 H 0.11 -1.21 8.14 -2.39 -0.02 -1.23 16 35 H 0.39 -5.71 7.60 -74.05 -0.56 -6.28 16 36 H 0.07 -0.10 8.05 -2.39 -0.02 -0.12 16 37 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 38 H 0.42 -6.33 7.33 -92.71 -0.68 -7.01 16 39 H 0.13 -1.37 8.14 -2.39 -0.02 -1.39 16 40 H 0.13 -1.29 8.14 -2.39 -0.02 -1.31 16 41 H 0.06 0.11 7.60 -2.39 -0.02 0.09 16 42 H 0.07 0.09 7.64 -2.39 -0.02 0.07 16 43 H 0.13 0.62 8.06 -2.91 -0.02 0.60 16 44 H 0.11 0.18 7.96 -2.39 -0.02 0.16 16 45 H 0.40 -2.80 8.70 -74.05 -0.64 -3.45 16 46 H -0.30 -1.56 7.11 99.48 0.71 -0.86 16 47 H -0.28 -0.69 7.11 99.48 0.71 0.02 16 48 H 0.15 -0.72 4.87 -2.91 -0.01 -0.73 16 49 H 0.15 -0.73 8.06 -2.91 -0.02 -0.75 16 50 H 0.14 0.16 6.30 -2.91 -0.02 0.14 16 51 H 0.09 -0.15 8.14 -2.39 -0.02 -0.17 16 52 H 0.10 0.04 7.39 -2.39 -0.02 0.02 16 Total: 0.00 -27.54 433.36 -1.59 -29.12 By element: Atomic # 1 Polarization: -23.71 SS G_CDS: -0.88 Total: -24.58 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: 4.78 Total: 6.72 kcal Atomic # 7 Polarization: 5.46 SS G_CDS: -2.46 Total: 3.00 kcal Atomic # 8 Polarization: -9.61 SS G_CDS: -5.07 Total: -14.68 kcal Atomic # 14 Polarization: -1.63 SS G_CDS: 2.04 Total: 0.42 kcal Total: -27.54 -1.59 -29.12 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_4549614.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -159.142 kcal (2) G-P(sol) polarization free energy of solvation -27.536 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -186.678 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.587 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.123 kcal (6) G-S(sol) free energy of system = (1) + (5) -188.265 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds