Wall clock time and date at job start Sun Mar 7 2021 07:06:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45198 * 109.46884 * 2 1 4 4 C 1.34231 * 116.99983 * 179.97438 * 3 2 1 5 5 O 1.20822 * 120.00142 * 0.02562 * 4 3 2 6 6 C 1.50698 * 120.00053 * 180.02562 * 4 3 2 7 7 H 1.09007 * 112.85138 * 309.66864 * 6 4 3 8 8 C 1.53779 * 113.61783 * 80.86494 * 6 4 3 9 9 C 1.53949 * 87.02162 * 139.95201 * 8 6 4 10 10 O 1.42903 * 113.61465 * 89.20012 * 9 8 6 11 11 C 1.53003 * 113.66645 * 220.06859 * 9 8 6 12 12 N 1.46499 * 109.46941 * 282.55868 * 11 9 8 13 13 C 1.34781 * 119.99775 * 180.02562 * 12 11 9 14 14 O 1.21278 * 120.00077 * 0.02562 * 13 12 11 15 15 C 1.50698 * 119.99981 * 179.97438 * 13 12 11 16 16 O 1.42902 * 109.47123 * 179.97438 * 15 13 12 17 17 C 1.35901 * 116.99956 * 180.02562 * 16 15 13 18 18 C 1.38706 * 120.05720 * 180.02562 * 17 16 15 19 19 N 1.48005 * 120.02609 * 359.97438 * 18 17 16 20 20 O 1.21803 * 120.00126 * 179.97438 * 19 18 17 21 21 O 1.21803 * 120.00177 * 0.02562 * 19 18 17 22 22 C 1.38165 * 119.94555 * 179.97438 * 18 17 16 23 23 C 1.38238 * 120.05874 * 0.02562 * 22 18 17 24 24 C 1.50694 * 119.94782 * 179.97438 * 23 22 18 25 25 O 1.42899 * 109.46969 * 299.99612 * 24 23 22 26 26 Si 1.86305 * 109.47025 * 179.97438 * 24 23 22 27 27 C 1.38292 * 120.10723 * 359.97438 * 23 22 18 28 28 C 1.38119 * 120.05813 * 359.74531 * 27 23 22 29 29 C 1.53780 * 87.11288 * 334.64046 * 9 8 6 30 30 H 1.08992 * 109.47399 * 59.99654 * 1 2 3 31 31 H 1.09004 * 109.46724 * 180.02562 * 1 2 3 32 32 H 1.09001 * 109.47194 * 299.99482 * 1 2 3 33 33 H 1.09002 * 109.47398 * 120.00338 * 2 1 3 34 34 H 1.09001 * 109.47194 * 240.00518 * 2 1 3 35 35 H 1.09000 * 113.61525 * 254.53163 * 8 6 4 36 36 H 1.09000 * 113.61256 * 25.42898 * 8 6 4 37 37 H 0.96705 * 114.00000 * 82.46444 * 10 9 8 38 38 H 1.09000 * 109.47157 * 42.55798 * 11 9 8 39 39 H 1.09003 * 109.46744 * 162.56154 * 11 9 8 40 40 H 0.96996 * 120.00047 * 0.02562 * 12 11 9 41 41 H 1.08997 * 109.47590 * 300.00698 * 15 13 12 42 42 H 1.09003 * 109.46877 * 59.99996 * 15 13 12 43 43 H 1.08000 * 119.97288 * 179.97438 * 22 18 17 44 44 H 1.09003 * 109.47339 * 59.99902 * 24 23 22 45 45 H 0.96702 * 113.99798 * 179.97438 * 25 24 23 46 46 H 1.48497 * 110.00079 * 298.67591 * 26 24 23 47 47 H 1.48498 * 110.00036 * 60.00355 * 26 24 23 48 48 H 1.08005 * 119.97104 * 179.97438 * 27 23 22 49 49 H 1.08005 * 120.02978 * 180.28145 * 28 27 23 50 50 H 1.09003 * 113.61029 * 270.81440 * 29 9 8 51 51 H 1.09000 * 113.69397 * 139.92296 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5868 0.0005 6 6 3.9206 2.9375 0.0012 7 1 3.4901 3.5739 -0.7720 8 6 3.9489 3.5919 1.3925 9 6 5.3313 4.1525 1.0123 10 8 5.2745 5.4239 0.3624 11 6 6.3452 4.1155 2.1576 12 7 6.0691 5.2114 3.0898 13 6 6.8406 5.3771 4.1824 14 8 7.7636 4.6193 4.3937 15 6 6.5570 6.5048 5.1411 16 8 7.5039 6.4701 6.2108 17 6 7.3869 7.4262 7.1694 18 6 8.2729 7.4523 8.2364 19 7 9.3467 6.4382 8.3323 20 8 10.1247 6.4618 9.2692 21 8 9.4529 5.5805 7.4740 22 6 8.1523 8.4257 9.2094 23 6 7.1493 9.3729 9.1207 24 6 7.0196 10.4331 10.1837 25 8 6.7976 9.8120 11.4513 26 14 5.5829 11.5475 9.7773 27 6 6.2647 9.3491 8.0579 28 6 6.3846 8.3816 7.0796 29 6 5.4576 2.9684 0.0392 30 1 -0.3634 0.5138 -0.8899 31 1 -0.3633 -1.0277 0.0005 32 1 -0.3634 0.5138 0.8900 33 1 1.8934 -0.5139 0.8899 34 1 1.8934 -0.5138 -0.8900 35 1 3.1877 4.3600 1.5292 36 1 3.9791 2.8739 2.2121 37 1 5.1950 6.1726 0.9692 38 1 6.2660 3.1634 2.6824 39 1 7.3522 4.2258 1.7550 40 1 5.3311 5.8176 2.9206 41 1 6.6360 7.4566 4.6160 42 1 5.5501 6.3946 5.5438 43 1 8.8416 8.4462 10.0405 44 1 7.9360 11.0221 10.2232 45 1 6.7047 10.4360 12.1842 46 1 5.8170 12.2239 8.4762 47 1 4.3272 10.7569 9.7203 48 1 5.4816 10.0899 7.9910 49 1 5.6963 8.3661 6.2474 50 1 5.9012 2.0797 0.4882 51 1 5.9129 3.2326 -0.9153 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_4549638.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:06:11 Heat of formation + Delta-G solvation = -172.670111 kcal Electronic energy + Delta-G solvation = -38695.686425 eV Core-core repulsion = 33146.497493 eV Total energy + Delta-G solvation = -5549.188932 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 411.159 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -43.37571 -42.19193 -41.84573 -41.00583 -40.22114 -39.33888 -37.80004 -37.64951 -37.40263 -36.04565 -35.47701 -33.64998 -32.71132 -32.45379 -31.00576 -28.90015 -27.91349 -27.03242 -26.66632 -26.05509 -24.21995 -23.74959 -22.81677 -21.98699 -21.91683 -20.81098 -20.53308 -19.86400 -19.42422 -19.15639 -18.74232 -18.70784 -18.39588 -17.82181 -17.72761 -17.61953 -17.48997 -17.39136 -16.75358 -16.54834 -16.31628 -16.04995 -15.96139 -15.53194 -15.23347 -15.20060 -14.85885 -14.61637 -14.53451 -14.22998 -14.21782 -13.92359 -13.84547 -13.80650 -13.53920 -13.30110 -13.03240 -13.00523 -12.83160 -12.76558 -12.70590 -12.59535 -12.42651 -12.32964 -12.30549 -12.22106 -11.96762 -11.79177 -11.60859 -11.50954 -11.14004 -10.97731 -10.94172 -10.42872 -10.37450 -9.84784 -4.88313 -1.41171 -0.35829 0.04867 0.25379 1.01617 1.07085 1.27971 1.35062 1.58843 1.69020 1.90369 1.92554 2.16471 2.83082 2.97905 3.04099 3.08759 3.24586 3.31234 3.38737 3.42526 3.48650 3.51932 3.56847 3.81331 3.87803 3.91149 3.92773 3.93752 4.00455 4.13995 4.17888 4.24017 4.27893 4.28381 4.40470 4.49474 4.55696 4.61308 4.66089 4.69981 4.77711 4.83668 4.85805 4.88112 4.95326 5.07534 5.09490 5.10502 5.12599 5.38815 5.62800 6.26264 6.36926 6.60559 6.63783 6.86018 7.02307 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.359 6.359 4 C 0.468 3.532 5 O -0.541 6.541 6 C -0.101 4.101 7 H 0.147 0.853 8 C -0.134 4.134 9 C 0.119 3.881 10 O -0.537 6.537 11 C 0.108 3.892 12 N -0.705 5.705 13 C 0.511 3.489 14 O -0.562 6.562 15 C 0.023 3.977 16 O -0.289 6.289 17 C 0.194 3.806 18 C -0.101 4.101 19 N 0.034 4.966 20 O -0.192 6.192 21 O -0.172 6.172 22 C 0.001 3.999 23 C -0.117 4.117 24 C -0.089 4.089 25 O -0.568 6.568 26 Si 0.778 3.222 27 C -0.027 4.027 28 C -0.187 4.187 29 C -0.112 4.112 30 H 0.069 0.931 31 H 0.095 0.905 32 H 0.070 0.930 33 H 0.067 0.933 34 H 0.066 0.934 35 H 0.118 0.882 36 H 0.094 0.906 37 H 0.395 0.605 38 H 0.073 0.927 39 H 0.068 0.932 40 H 0.422 0.578 41 H 0.147 0.853 42 H 0.144 0.856 43 H 0.160 0.840 44 H 0.098 0.902 45 H 0.407 0.593 46 H -0.269 1.269 47 H -0.281 1.281 48 H 0.164 0.836 49 H 0.206 0.794 50 H 0.101 0.899 51 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.832 13.252 -0.240 18.448 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.275 6.275 4 C 0.313 3.687 5 O -0.430 6.430 6 C -0.120 4.120 7 H 0.164 0.836 8 C -0.172 4.172 9 C 0.077 3.923 10 O -0.346 6.346 11 C -0.016 4.016 12 N -0.362 5.362 13 C 0.297 3.703 14 O -0.438 6.438 15 C -0.054 4.054 16 O -0.199 6.199 17 C 0.145 3.855 18 C -0.187 4.187 19 N 0.546 4.454 20 O -0.402 6.402 21 O -0.386 6.386 22 C -0.018 4.018 23 C -0.118 4.118 24 C -0.197 4.197 25 O -0.379 6.379 26 Si 0.680 3.320 27 C -0.044 4.044 28 C -0.206 4.206 29 C -0.149 4.149 30 H 0.088 0.912 31 H 0.113 0.887 32 H 0.089 0.911 33 H 0.085 0.915 34 H 0.084 0.916 35 H 0.136 0.864 36 H 0.112 0.888 37 H 0.247 0.753 38 H 0.092 0.908 39 H 0.087 0.913 40 H 0.261 0.739 41 H 0.165 0.835 42 H 0.162 0.838 43 H 0.177 0.823 44 H 0.116 0.884 45 H 0.259 0.741 46 H -0.195 1.195 47 H -0.208 1.208 48 H 0.180 0.820 49 H 0.223 0.777 50 H 0.119 0.881 51 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -12.877 11.957 -1.604 17.645 hybrid contribution 0.913 -1.011 0.259 1.386 sum -11.964 10.947 -1.345 16.272 Atomic orbital electron populations 1.21822 0.90552 1.04265 1.03822 1.23258 0.97032 0.79423 1.02391 1.86523 1.24236 1.33382 1.83391 1.24136 0.80551 0.93064 0.70969 1.90679 1.61208 1.44338 1.46816 1.22545 0.96732 0.89526 1.03160 0.83569 1.23678 0.98314 1.01089 0.94070 1.22062 0.93479 0.85522 0.91282 1.86603 1.96107 1.14676 1.37184 1.21853 0.99523 0.90870 0.89391 1.45409 1.34338 1.33107 1.23342 1.20431 0.82025 0.85619 0.82213 1.90875 1.31560 1.46716 1.74684 1.23150 0.94582 1.00419 0.87268 1.86473 1.53529 1.47201 1.32670 1.18844 0.91951 0.88481 0.86264 1.20882 0.96131 0.98441 1.03210 1.43807 1.01142 1.01162 0.99316 1.94499 1.39680 1.80333 1.25671 1.94684 1.78675 1.31028 1.34196 1.20878 0.97061 0.89038 0.94817 1.19695 0.95797 0.98306 0.98048 1.25035 1.12239 0.97488 0.84921 1.86444 1.95635 1.38815 1.16996 0.93402 0.73563 0.80971 0.84029 1.21504 0.95470 0.96124 0.91344 1.21702 0.99711 0.94994 1.04175 1.23079 0.93613 0.96961 1.01291 0.91179 0.88653 0.91089 0.91496 0.91577 0.86394 0.88789 0.75333 0.90823 0.91331 0.73930 0.83526 0.83843 0.82252 0.88431 0.74085 1.19513 1.20797 0.81953 0.77732 0.88109 0.88920 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.59 10.29 71.98 0.74 1.33 16 2 C 0.05 0.05 6.19 71.98 0.45 0.50 16 3 O -0.36 -1.06 10.22 -51.42 -0.53 -1.59 16 4 C 0.47 1.86 7.48 71.24 0.53 2.39 16 5 O -0.54 -5.88 15.66 21.98 0.34 -5.54 16 6 C -0.10 0.30 4.19 -11.01 -0.05 0.25 16 7 H 0.15 -0.83 8.14 -2.38 -0.02 -0.85 16 8 C -0.13 1.06 7.03 31.18 0.22 1.27 16 9 C 0.12 -0.79 1.41 -10.21 -0.01 -0.81 16 10 O -0.54 4.39 13.42 -148.98 -2.00 2.39 16 11 C 0.11 -0.38 5.26 86.38 0.45 0.07 16 12 N -0.71 5.98 5.32 -463.05 -2.46 3.52 16 13 C 0.51 -0.01 7.91 87.66 0.69 0.68 16 14 O -0.56 -8.13 16.50 16.01 0.26 -7.87 16 15 C 0.02 -0.17 5.22 71.24 0.37 0.20 16 16 O -0.29 -1.51 7.68 -63.41 -0.49 -1.99 16 17 C 0.19 0.52 6.67 22.51 0.15 0.67 16 18 C -0.10 -0.90 6.87 36.47 0.25 -0.65 16 19 N 0.03 0.59 4.45 -46.25 -0.21 0.39 16 20 O -0.19 -3.60 18.45 18.88 0.35 -3.25 16 21 O -0.17 -3.82 17.24 25.60 0.44 -3.38 16 22 C 0.00 0.00 9.11 22.25 0.20 0.21 16 23 C -0.12 0.18 5.42 -19.85 -0.11 0.07 16 24 C -0.09 0.59 2.81 71.23 0.20 0.79 16 25 O -0.57 2.60 12.74 -148.98 -1.90 0.70 16 26 Si 0.78 -8.20 29.79 68.60 2.04 -6.16 16 27 C -0.03 0.15 8.66 22.25 0.19 0.35 16 28 C -0.19 1.31 9.04 22.37 0.20 1.51 16 29 C -0.11 0.21 6.79 31.12 0.21 0.42 16 30 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 31 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 32 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 33 H 0.07 0.10 8.13 -2.39 -0.02 0.08 16 34 H 0.07 0.12 8.13 -2.39 -0.02 0.10 16 35 H 0.12 -1.50 8.14 -2.39 -0.02 -1.52 16 36 H 0.09 -0.58 7.99 -2.39 -0.02 -0.60 16 37 H 0.40 -6.64 7.60 -74.05 -0.56 -7.21 16 38 H 0.07 -0.01 8.06 -2.39 -0.02 -0.03 16 39 H 0.07 0.05 8.14 -2.39 -0.02 0.03 16 40 H 0.42 -7.73 7.33 -92.71 -0.68 -8.41 16 41 H 0.15 -2.44 7.65 -2.39 -0.02 -2.46 16 42 H 0.14 -2.30 7.67 -2.39 -0.02 -2.32 16 43 H 0.16 0.69 7.61 -2.91 -0.02 0.67 16 44 H 0.10 -0.96 7.96 -2.39 -0.02 -0.98 16 45 H 0.41 -6.00 8.74 -74.06 -0.65 -6.65 16 46 H -0.27 1.99 7.11 99.48 0.71 2.69 16 47 H -0.28 1.34 7.11 99.48 0.71 2.04 16 48 H 0.16 -1.65 4.87 -2.91 -0.01 -1.67 16 49 H 0.21 -3.61 6.30 -2.91 -0.02 -3.63 16 50 H 0.10 0.12 7.41 -2.39 -0.02 0.10 16 51 H 0.09 -0.13 8.14 -2.39 -0.02 -0.15 16 Total: 0.00 -45.30 438.50 -0.25 -45.55 By element: Atomic # 1 Polarization: -31.22 SS G_CDS: -0.82 Total: -32.03 kcal Atomic # 6 Polarization: 4.56 SS G_CDS: 4.70 Total: 9.26 kcal Atomic # 7 Polarization: 6.57 SS G_CDS: -2.67 Total: 3.91 kcal Atomic # 8 Polarization: -17.01 SS G_CDS: -3.51 Total: -20.53 kcal Atomic # 14 Polarization: -8.20 SS G_CDS: 2.04 Total: -6.16 kcal Total: -45.30 -0.25 -45.55 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_4549638.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -127.118 kcal (2) G-P(sol) polarization free energy of solvation -45.298 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -172.416 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.254 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.552 kcal (6) G-S(sol) free energy of system = (1) + (5) -172.670 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds