Wall clock time and date at job start Sun Mar 7 2021 07:06:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45199 * 109.47075 * 2 1 4 4 C 1.34230 * 116.99614 * 179.97438 * 3 2 1 5 5 O 1.20824 * 120.00179 * 0.02562 * 4 3 2 6 6 C 1.50706 * 119.99717 * 179.97438 * 4 3 2 7 7 H 1.08996 * 112.85304 * 309.67271 * 6 4 3 8 8 C 1.53786 * 113.61013 * 80.86628 * 6 4 3 9 9 C 1.53958 * 87.01676 * 139.94932 * 8 6 4 10 10 O 1.42904 * 113.61189 * 89.19681 * 9 8 6 11 11 C 1.52997 * 113.66730 * 220.06693 * 9 8 6 12 12 N 1.46502 * 109.46922 * 282.56078 * 11 9 8 13 13 C 1.34780 * 119.99891 * 180.02562 * 12 11 9 14 14 O 1.21279 * 119.99979 * 359.97438 * 13 12 11 15 15 C 1.50703 * 119.99898 * 179.97438 * 13 12 11 16 16 O 1.42897 * 109.47225 * 179.97438 * 15 13 12 17 17 C 1.35979 * 117.00311 * 179.97438 * 16 15 13 18 18 C 1.38674 * 120.00342 * 179.97438 * 17 16 15 19 19 C 1.50704 * 119.99716 * 359.97438 * 18 17 16 20 20 O 1.42901 * 109.47073 * 284.99311 * 19 18 17 21 21 Si 1.86303 * 109.47232 * 164.99971 * 19 18 17 22 22 C 1.38154 * 120.00467 * 180.02562 * 18 17 16 23 23 C 1.38682 * 119.99549 * 359.97438 * 22 18 17 24 24 O 1.35982 * 119.99876 * 180.02562 * 23 22 18 25 25 C 1.42894 * 116.99980 * 180.02562 * 24 23 22 26 26 C 1.38721 * 119.99896 * 0.02562 * 23 22 18 27 27 C 1.38111 * 120.00354 * 359.71902 * 26 23 22 28 28 C 1.53777 * 87.11420 * 334.63793 * 9 8 6 29 29 H 1.09002 * 109.47153 * 300.00058 * 1 2 3 30 30 H 1.08998 * 109.47533 * 59.99688 * 1 2 3 31 31 H 1.08996 * 109.47853 * 180.02562 * 1 2 3 32 32 H 1.09002 * 109.47153 * 239.99942 * 2 1 3 33 33 H 1.09001 * 109.46832 * 120.00132 * 2 1 3 34 34 H 1.08998 * 113.61535 * 254.52409 * 8 6 4 35 35 H 1.08996 * 113.61870 * 25.43566 * 8 6 4 36 36 H 0.96702 * 113.99864 * 82.46913 * 10 9 8 37 37 H 1.08996 * 109.47252 * 42.55985 * 11 9 8 38 38 H 1.08997 * 109.47364 * 162.56314 * 11 9 8 39 39 H 0.96999 * 120.00321 * 359.97438 * 12 11 9 40 40 H 1.08996 * 109.47129 * 299.99776 * 15 13 12 41 41 H 1.09003 * 109.47271 * 59.99856 * 15 13 12 42 42 H 1.09000 * 109.47281 * 44.99366 * 19 18 17 43 43 H 0.96709 * 113.99717 * 60.00396 * 20 19 18 44 44 H 1.48504 * 109.99832 * 299.99960 * 21 19 18 45 45 H 1.48497 * 109.99964 * 61.31338 * 21 19 18 46 46 H 1.07995 * 119.99971 * 179.97438 * 22 18 17 47 47 H 1.09000 * 109.47260 * 180.02562 * 25 24 23 48 48 H 1.09003 * 109.47260 * 299.99986 * 25 24 23 49 49 H 1.09000 * 109.47270 * 59.99824 * 25 24 23 50 50 H 1.08002 * 119.99260 * 180.02562 * 26 23 22 51 51 H 1.07992 * 120.00183 * 180.29777 * 27 26 23 52 52 H 1.08999 * 113.61494 * 270.81323 * 28 9 8 53 53 H 1.09002 * 113.69409 * 139.91811 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5447 0.0005 5 8 4.0807 0.5865 0.0005 6 6 3.9207 2.9374 0.0000 7 1 3.4904 3.5732 -0.7737 8 6 3.9488 3.5929 1.3909 9 6 5.3314 4.1531 1.0104 10 8 5.2747 5.4240 0.3594 11 6 6.3452 4.1169 2.1557 12 7 6.0690 5.2136 3.0870 13 6 6.8404 5.3802 4.1796 14 8 7.7628 4.6220 4.3921 15 6 6.5567 6.5087 5.1373 16 8 7.5034 6.4749 6.2072 17 6 7.3870 7.4330 7.1650 18 6 8.2727 7.4582 8.2318 19 6 9.3639 6.4234 8.3298 20 8 8.8018 5.1762 8.7431 21 14 10.6335 6.9757 9.5764 22 6 8.1542 8.4313 9.2053 23 6 7.1497 9.3833 9.1154 24 8 7.0333 10.3414 10.0732 25 6 5.9755 11.2894 9.9174 26 6 6.2638 9.3580 8.0482 27 6 6.3855 8.3884 7.0723 28 6 5.4578 2.9682 0.0383 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5139 -0.8899 31 1 -0.3635 -1.0276 0.0005 32 1 1.8933 -0.5138 -0.8900 33 1 1.8933 -0.5139 0.8900 34 1 3.1878 4.3612 1.5269 35 1 3.9790 2.8757 2.2111 36 1 5.1952 6.1732 0.9656 37 1 6.2658 3.1653 2.6813 38 1 7.3522 4.2269 1.7533 39 1 5.3315 5.8203 2.9170 40 1 6.6360 7.4601 4.6115 41 1 5.5498 6.3990 5.5401 42 1 9.8389 6.3029 7.3562 43 1 8.1314 4.8277 8.1395 44 1 11.2255 8.2718 9.1582 45 1 10.0049 7.1128 10.9148 46 1 8.8437 8.4506 10.0363 47 1 5.9957 11.9961 10.7470 48 1 6.1057 11.8280 8.9787 49 1 5.0186 10.7677 9.9072 50 1 5.4818 10.0997 7.9780 51 1 5.6988 8.3717 6.2390 52 1 5.9013 2.0799 0.4880 53 1 5.9131 3.2316 -0.9164 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_4974302.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:06:33 Heat of formation + Delta-G solvation = -214.692312 kcal Electronic energy + Delta-G solvation = -36886.274630 eV Core-core repulsion = 31692.060103 eV Total energy + Delta-G solvation = -5194.214527 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.180 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -42.16673 -41.89229 -41.07010 -40.35208 -39.74834 -38.17083 -37.77475 -37.00350 -36.01000 -35.43381 -32.92730 -32.69461 -31.43781 -30.40825 -28.72088 -28.03228 -26.98991 -26.64062 -26.12609 -23.99585 -23.61807 -22.49894 -21.96055 -21.82523 -20.78743 -19.62731 -19.26673 -18.90112 -18.68363 -18.17556 -17.79506 -17.69274 -17.56835 -17.40198 -17.33787 -16.78708 -16.76346 -16.31936 -16.05358 -15.95983 -15.67133 -15.53241 -15.39927 -15.14232 -14.89295 -14.69139 -14.44863 -14.24018 -14.11923 -13.96925 -13.80447 -13.62675 -13.51965 -13.49699 -13.27070 -13.11157 -12.98788 -12.80104 -12.57977 -12.56615 -12.36666 -12.28548 -12.22809 -11.76939 -11.59210 -11.53876 -11.49006 -11.29486 -11.13141 -11.04327 -10.91322 -10.33265 -10.23824 -8.93628 -4.87471 -0.06916 0.21338 1.03582 1.30861 1.34418 1.40553 1.58118 1.61819 1.88936 2.22446 2.42385 2.47315 2.85367 3.09157 3.32200 3.40018 3.43302 3.45722 3.52671 3.63522 3.83074 3.89533 3.92550 3.94338 3.98855 4.01890 4.03807 4.06692 4.12688 4.19955 4.27017 4.29516 4.31516 4.33682 4.34021 4.56859 4.57852 4.63988 4.68066 4.68572 4.79370 4.85863 4.87138 4.87315 4.90295 5.00530 5.07810 5.09806 5.12077 5.15449 5.29645 5.40469 6.04535 6.28218 6.35791 6.53952 6.62296 6.65389 7.05383 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.468 3.532 5 O -0.540 6.540 6 C -0.102 4.102 7 H 0.145 0.855 8 C -0.134 4.134 9 C 0.117 3.883 10 O -0.538 6.538 11 C 0.109 3.891 12 N -0.708 5.708 13 C 0.516 3.484 14 O -0.566 6.566 15 C 0.035 3.965 16 O -0.311 6.311 17 C 0.098 3.902 18 C -0.119 4.119 19 C -0.084 4.084 20 O -0.545 6.545 21 Si 0.809 3.191 22 C -0.143 4.143 23 C 0.087 3.913 24 O -0.343 6.343 25 C 0.017 3.983 26 C -0.159 4.159 27 C -0.153 4.153 28 C -0.110 4.110 29 H 0.070 0.930 30 H 0.069 0.931 31 H 0.095 0.905 32 H 0.066 0.934 33 H 0.067 0.933 34 H 0.116 0.884 35 H 0.095 0.905 36 H 0.395 0.605 37 H 0.075 0.925 38 H 0.069 0.931 39 H 0.420 0.580 40 H 0.129 0.871 41 H 0.129 0.871 42 H 0.079 0.921 43 H 0.372 0.628 44 H -0.267 1.267 45 H -0.287 1.287 46 H 0.122 0.878 47 H 0.113 0.887 48 H 0.071 0.929 49 H 0.070 0.930 50 H 0.166 0.834 51 H 0.178 0.822 52 H 0.102 0.898 53 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.820 5.950 -3.452 11.185 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.313 3.687 5 O -0.430 6.430 6 C -0.120 4.120 7 H 0.163 0.837 8 C -0.172 4.172 9 C 0.075 3.925 10 O -0.347 6.347 11 C -0.015 4.015 12 N -0.364 5.364 13 C 0.302 3.698 14 O -0.443 6.443 15 C -0.042 4.042 16 O -0.224 6.224 17 C 0.053 3.947 18 C -0.120 4.120 19 C -0.192 4.192 20 O -0.351 6.351 21 Si 0.711 3.289 22 C -0.162 4.162 23 C 0.042 3.958 24 O -0.257 6.257 25 C -0.077 4.077 26 C -0.177 4.177 27 C -0.171 4.171 28 C -0.148 4.148 29 H 0.089 0.911 30 H 0.088 0.912 31 H 0.114 0.886 32 H 0.084 0.916 33 H 0.086 0.914 34 H 0.134 0.866 35 H 0.113 0.887 36 H 0.246 0.754 37 H 0.094 0.906 38 H 0.087 0.913 39 H 0.259 0.741 40 H 0.146 0.854 41 H 0.147 0.853 42 H 0.097 0.903 43 H 0.221 0.779 44 H -0.193 1.193 45 H -0.215 1.215 46 H 0.140 0.860 47 H 0.132 0.868 48 H 0.089 0.911 49 H 0.088 0.912 50 H 0.184 0.816 51 H 0.195 0.805 52 H 0.120 0.880 53 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -7.052 5.298 -2.642 9.208 hybrid contribution -1.844 0.540 -0.659 2.031 sum -8.897 5.837 -3.301 11.141 Atomic orbital electron populations 1.21822 0.90618 1.04257 1.03798 1.23254 0.96988 0.79420 1.02417 1.86525 1.24276 1.33392 1.83392 1.24130 0.80537 0.93055 0.70972 1.90676 1.61190 1.44297 1.46812 1.22548 0.96836 0.89520 1.03145 0.83730 1.23681 0.98354 1.01061 0.94091 1.22079 0.93527 0.85473 0.91380 1.86600 1.96115 1.14739 1.37229 1.21841 0.99429 0.90902 0.89363 1.45463 1.34407 1.32985 1.23551 1.20481 0.81772 0.85508 0.82018 1.90802 1.31668 1.46938 1.74913 1.22778 0.94669 0.99178 0.87616 1.86089 1.54058 1.49030 1.33262 1.18667 0.96151 0.90591 0.89276 1.19546 0.99197 0.98860 0.94419 1.25348 0.99561 0.84437 1.09843 1.86660 1.60049 1.35548 1.52826 0.92500 0.82333 0.80262 0.73810 1.20154 0.99998 0.96044 0.99961 1.19003 0.95976 0.90465 0.90317 1.86079 1.53550 1.40127 1.45956 1.23388 0.88679 0.90924 1.04725 1.21447 1.00634 1.01701 0.93934 1.21481 0.99036 0.94815 1.01760 1.23074 0.93503 0.96970 1.01282 0.91101 0.91234 0.88649 0.91574 0.91422 0.86609 0.88665 0.75372 0.90634 0.91255 0.74133 0.85372 0.85315 0.90299 0.77944 1.19277 1.21482 0.86016 0.86825 0.91083 0.91168 0.81634 0.80479 0.87953 0.88977 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.64 10.29 71.98 0.74 1.38 16 2 C 0.05 0.03 6.19 71.98 0.45 0.47 16 3 O -0.36 -0.91 10.22 -51.42 -0.53 -1.43 16 4 C 0.47 1.57 7.48 71.24 0.53 2.10 16 5 O -0.54 -5.43 15.66 21.97 0.34 -5.08 16 6 C -0.10 0.35 4.19 -11.01 -0.05 0.31 16 7 H 0.15 -0.85 8.14 -2.39 -0.02 -0.87 16 8 C -0.13 1.12 7.03 31.18 0.22 1.34 16 9 C 0.12 -0.87 1.41 -10.21 -0.01 -0.88 16 10 O -0.54 4.52 13.42 -148.98 -2.00 2.52 16 11 C 0.11 -0.54 5.26 86.38 0.45 -0.08 16 12 N -0.71 6.61 5.32 -463.06 -2.46 4.14 16 13 C 0.52 -0.98 7.91 87.66 0.69 -0.29 16 14 O -0.57 -5.87 16.50 16.01 0.26 -5.60 16 15 C 0.04 -0.27 5.22 71.24 0.37 0.10 16 16 O -0.31 -0.67 8.56 -74.28 -0.64 -1.31 16 17 C 0.10 0.27 6.62 22.49 0.15 0.42 16 18 C -0.12 -0.91 5.27 -19.78 -0.10 -1.01 16 19 C -0.08 -0.64 2.33 71.24 0.17 -0.47 16 20 O -0.54 -5.06 12.65 -148.98 -1.89 -6.94 16 21 Si 0.81 4.44 30.41 68.60 2.09 6.52 16 22 C -0.14 -1.31 8.59 22.36 0.19 -1.12 16 23 C 0.09 0.50 6.69 22.49 0.15 0.65 16 24 O -0.34 -1.96 10.50 -93.35 -0.98 -2.94 16 25 C 0.02 -0.07 9.81 113.37 1.11 1.04 16 26 C -0.16 0.20 9.03 22.36 0.20 0.40 16 27 C -0.15 0.51 9.03 22.36 0.20 0.71 16 28 C -0.11 0.30 6.79 31.12 0.21 0.51 16 29 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 30 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 31 H 0.09 -0.66 8.14 -2.39 -0.02 -0.68 16 32 H 0.07 0.09 8.13 -2.39 -0.02 0.07 16 33 H 0.07 0.06 8.13 -2.39 -0.02 0.04 16 34 H 0.12 -1.48 8.14 -2.39 -0.02 -1.50 16 35 H 0.09 -0.67 7.99 -2.39 -0.02 -0.68 16 36 H 0.40 -6.59 7.60 -74.06 -0.56 -7.15 16 37 H 0.08 -0.15 8.06 -2.39 -0.02 -0.17 16 38 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 39 H 0.42 -7.62 7.33 -92.71 -0.68 -8.30 16 40 H 0.13 -1.83 7.65 -2.39 -0.02 -1.85 16 41 H 0.13 -1.85 7.67 -2.39 -0.02 -1.87 16 42 H 0.08 0.56 7.82 -2.39 -0.02 0.54 16 43 H 0.37 2.37 8.60 -74.05 -0.64 1.73 16 44 H -0.27 -2.13 7.11 99.48 0.71 -1.43 16 45 H -0.29 -3.20 6.81 99.48 0.68 -2.52 16 46 H 0.12 1.34 4.93 -2.91 -0.01 1.33 16 47 H 0.11 -0.75 8.14 -2.39 -0.02 -0.77 16 48 H 0.07 -0.51 7.66 -2.39 -0.02 -0.53 16 49 H 0.07 -0.49 7.66 -2.39 -0.02 -0.50 16 50 H 0.17 -1.29 6.29 -2.91 -0.02 -1.31 16 51 H 0.18 -2.24 6.29 -2.91 -0.02 -2.26 16 52 H 0.10 -0.01 7.41 -2.39 -0.02 -0.02 16 53 H 0.09 -0.20 8.14 -2.39 -0.02 -0.22 16 Total: 0.00 -33.21 440.67 -1.00 -34.21 By element: Atomic # 1 Polarization: -28.79 SS G_CDS: -0.89 Total: -29.68 kcal Atomic # 6 Polarization: -0.09 SS G_CDS: 5.68 Total: 5.59 kcal Atomic # 7 Polarization: 6.61 SS G_CDS: -2.46 Total: 4.14 kcal Atomic # 8 Polarization: -15.37 SS G_CDS: -5.42 Total: -20.79 kcal Atomic # 14 Polarization: 4.44 SS G_CDS: 2.09 Total: 6.52 kcal Total: -33.21 -1.00 -34.21 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_4974302.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -180.479 kcal (2) G-P(sol) polarization free energy of solvation -33.209 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -213.688 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.005 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.214 kcal (6) G-S(sol) free energy of system = (1) + (5) -214.692 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds